| Id Trinity | TRINITY_DN52100_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_431630 |
| Sequence | GTGTTTCCATCAATGCCTGAAGTGATGAGGTTGAACAAGTTGGGTTCTTTCAGCATGTCACAGCTTGGACAATCAAAAAGTCCTTTTTTTCAGCTTTTCA AGAGGAATAAGCAGCAATCTGCAGGGTTTGCTGACAGCATGTTGAAGCTTGTGAGGACATTGCCAAAGGTGTTGAAGTATTTGCCTAGTGATAAGGCTCA AGATGCTAGGCTTTATATTTTGAGTCTGCAGTTTTGGCTTGGAGGGTCACCTGATAACTTGGAGAATTTCCTGAAAATGATTACTGGATCTTATGTTCCT GCTCTGAAGGGGACAAAGATCGAGTATTCGGAGCCGGTTTTGTACTTGGACACTGGGATTTGGCATCCTCTTGCTCCTTGTATGTATGATGATGTGAAAG AGTATTTGAATTGGTATGGAACTAGAAGGGACGCGAACGAGAAGCTTAAGAGTCCGAACGCGCCTGTAATTGGTTTGGTTTTGCAAAGGAGTCATATTGT GACTGGTGATGATGGTCACTATGTGGCTGTGATCATGGAACTTGAGGCTAAGGGAGCTAAGGTTATTCCAATTTTCGCCGGTGGTCTTGATTTTTCAGGA CCAGTGGAGAGGTACTTGATTGATCCGGTTACCACGAAACCATTTGTGAATTCTGTAATATCACTTACAGGATTTGCTCTTGTTGGGGGCCCTGCAAGGC AGGACCATCCGAGGGCGATTGAGGCGTTGAGGAAACTTGATGTTCCTTACATTGTTGCTGTGCCACTAGTGTTTCAGACAACAGAAGAGTGGCTGAACAG TACACTTGGTCTGCATCCTGTACAGGTTGCTCTTCAAGTTGCTCTTCCAGAGCTAGATGGAGGCATGGAGCCGATTGTTTTCGCTGGCCGAGATCCCAGA ACCGGTAACAATACATATTTTCATTACATGGCAAGCTATCAGCATTATCATTTGTTTATCCACATTCATTTCTAACCAGTCAAAATATTAGTTTTGTCCT TTAAAAAATCATGAGTAGCTAAGGAGGAATGTGGATAGACAATTAAGAGGGCTATCAGCAACACCATTCCTTGGAATTTGGACTTCATAAATCTGTGTAA TGAATCCAACGTAGCTTTTTTTTTTCCTTTTCTTAACAATT BLAST |
| Tissue | pods |
| Gene name | LI_gene_190059; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_431630
| Blastp | Magnesium-chelatase subunit ChlH, chloroplastic from Oryza sativa with 88.64% of identity |
|---|---|
| Blastx | Magnesium-chelatase subunit ChlH, chloroplastic from Oryza sativa with 88.64% of identity |
| Eggnog | cobaltochelatase, cobn subunit(COG1429) |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425159.1) |
| Pfam | Domain of unknown function (DUF3479) (PF11965.7) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |