Ll_transcript_429475

• Id Trinity: TRINITY_DN52102_c1_g1_i31
• Name Transcript: Ll_transcript_429475
• Sequence: ATGAGTTGGTGGGCAACTATCCCTTCCTTGAAATTGAACCAACTTATATATATTATTGAATTTCATAAATCTACGTAAAAGCTAGAATCTCTGTCTCTAG AAGTTTAATACAGTGGTGCACCATCATGGAGGAAGAGAAGAGGAGTGCTATAGTGAAGGTGGAACCAAAACCAAGAAAAGGGTTCATTGCAATAGTGATT GATTTGTTGGAGAAGTTGCTGGTTAAGTTGTTCCATAATTCTAAACGGCCCCATCATTACCTTGCTGGTAATTTTGCACCTGTTCCTGATGAGACCCCTC CAACTAATGATCTTCCTGTTCTAGGCTACCTTCCGGATTGCTTGAATGGAGAATTTGTTAGGGTGGGACCTAATCCAAAGTTTGCTCCTGTGGCTGGATA TCATTGGTTTGATGGAGATGGAATGATTCATGGTTTGCGAATCAAAGATGGAAAAGCTGCATATGTTTCCCGTTTTGTGAGGACTTCTCGTCTCAAACAA GAAGAATCTTTTCGAGGCGCCAAATATATGAAGATTGGAGATCTCAAGGGTCTGTTTGGACTAGTAGTGGTTAACCTGCAACTGTTAAGATCTAAATTTA AAGTACTGGATGATTCTTATGGAAACTCAACAGCTAATACAGCACTAGTTTATCACCATGGGAAACTCCTAGCACTCTCAGAAGTTGATAAGCCCTATGT TATTAAAGTTATTGAAGATGGTGATTTGGAGACACTCGGTTTGCTAGATTACGACAAGAGATTGAGCCATTCCTTCACTGCTCATCCGAAAGTTGACCCA GTTACTGGCGAGATGTTTACATTTGGCTATTCGCAAACGCCACCATATATCACATACAGAGTAATTTCAAAGGATGGTTATATGCATGATCCGGTACCCA TAACAGTACCAGAGTCTATCATGATGCATGACTTTGCTATCACAGAGAATTATGCAATATTCATGGATCTTCCCATGTATTTTAGACCAAAGGATATGGT GACAAAGAACAAACTGGTATACTCATTTGATTCAACCAAGAAAGCTCGTTTCGGTATACTACCTCGATATGCTAAGGACGAGAAGCATATTAGATGGTTT GAACTTCCAACCTGCTTCATTTTCCACAATGCCAATGCCTGGGAGGAGGAGGATGAAGTTGTTCTAATCGCATGCCGCATAGAGAAACCAGATTTGGACT TGGTCAGCGGATCTCTCAAGGAAAAGCTTGAAAGTTTCGCAAATGAGCTGTATGAAATGAGATTTAACATGAAAACTGGTGAGGCTTCTCAAAAGAAACT ATCAGCACCTGCCCTGGATTTTCCGAGGGTGAACGAAAACTACACTGGCAGGAAGCAGCGATATGTATACGGAACCATATTAGGCAGCATTGCAAGAGTT ACTGGGATTGTTAAATTTGATTTGCATGCACAACCAGAGCCTGAAAATACAAAGCTGGTAGTTGGAGGAAACGTTCAGGGTATATATGACTTAGGACCAG GGAGATTTGGCTCAGAAGCTATTTACGTCCCTCGTGTTCCTGGCACCACTTCTGAAGAAGATGATGGATACTTGATCTTTTTTGTGCACGACGAGAATAC AAAGTAACACTTTCAACTTTATGCTCCAGTTGTGTGTTATTAATGCTACATTGCTATCATTTTATATGCATGAACAATAATTACTGTGACTGTAAGGCCA GTTTAAGTCCTTCATTTAAGTACTACCACATGGCACATGGTCTAAATTGAATTCTCTCTTATATTCTCTGTGATAAGAAACAAGTCTAATCATGATATTA CAAAACTGCAGAAAATCCTATGTGCATGTGGTTGATGCAAAAACAATGTCAGCAGATCCGGTTGCAGTCGTGGAGTTGCCACATCGTGTTCCATATGGAT TCCATGCCTTCTTTGTGACAGAGGTTTGTGTCCCTTGAAATTGTTTGTTTTCTACATTGTATTTTGTTCTCTTTCTTTCTACTACATTAATTGGAATGTT CATTTAGTAAGCACCTTCACATGGTTATTATAGAAACATTACATTGAAAGATGGTAATCTGGTAATGCTTACTAAAGTTACAATGCTATGAAAGTGGAGA TTCCATAAGAATACTTTTGTTTTCATTTTCACCTTTAGTTTACCAATTTTAGAAGATAAAACCAAATGTGTTTACTTTTGGTAAATCTGTTTACTTTAGT CTTTGTCTGTATCAAACATCCCATGAGCAATTGCATAGCAGGGAAAATTGACAGGCACCAAGAAGTTGGTAACTTGATTTGTGTGGCATTTTCTAAAATT GTTTTTCTATTGTGTCCGTATCAGCACATGTTTATAAAAACTTAATATGAAATTCAATATTAATGCATAATTTCTCAATGAAAACTGTCTGTTTTTTCAG ACATGTCCATGAGCACACAATGGAAAAACTCTTTCTAAAACATCAGTCTTGTTGAATGGATGGTACCCAGAATTTCAATATTAAGGCAAACCAGGACAAG CTGAAATTTGAGAAAACAATAGATGCTACCATTTTTCTACCAACAAAAATGTTGCTTTAACTTGATCTTATATCTTTCCTTTTTCTTCATTGATAAAGGG ACATAATTCTTAACAAAGCTTAAAAAGGGCAACTATCTTCTTGTTTGTTTGTATAGTTCAATTAATCATGTATTCATGGAACAGAAAACTTGCCTTATTC TTCCTCCAATTCATTTAAGTGTGATGAAAAAAGTTGGTCCATAATTAGTGACATAATGACATATCAAGAAAGTGTTGCTAGTTGCTTTTCTAGATATGTT CTTATACTTAAAAATCTCTCAAGTCTCAACTAAAGGAAATTGAATGAACATGATAAAGTATTACTTCTTGCTTTTATAGCCTTCTATCTTTTTAATTCTT ATACCAAATGGCACTTTAAATGTATCAGGGATCATATGTTTGATCATTCAATTGATTGACTTAATGATTGGTTACCTCATTTTGTTTTAAAAGACTAAGA ACTGTTGTTTACACTACACAATCCTATTATTTACTTCATTTTCCTTCACTTATAAAAAAAATGCACAGTGCTCATTTTTTTCATGTCTCTTTGTGCAGGA CCAACTGCAAGAACAGGCAAAACTTTGATATAGTTGATAGCCACAGTTGCTCAATATGTGTTCACATTTTTCTGCAATTTGGCAATTCTGTACTATATAT CTAGTATCACTGTGGCCCAACTTTTTTTACAGTGCATAATTATTGTGAAATAATAAAAGAAGTTCTAAGATAAAATGCTTCAATCATTATGAAGTGAAAG ATGTTTCTAATAAAAGGGTAGAGGGTGAGTTAATAAAGTGTTGACTAAATGTGCATAGTTTTAGTGAGTTGAACCTTTAAAATGGTTCTTTTTATTTCCC AAAAAACAAGGGAAAGACTTTTTAAAATGACATTTTATATAGCGACACTTGG
• Tissue: pods
• Gene name: LI_gene_190070;
• Additional information: details;

Expression of Ll_transcript_429475

FPKM

• PAB: 0.2
• PNAB: 0.2
• PS1: 0
• PS2: 0.1
• PS3: 0.3
• PW1: 0
• PW2: 0
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_429475

• Blastp: Carotenoid 9,10(9',10')-cleavage dioxygenase 1 from Pisum with 78.21% of identity
• Blastx: Carotenoid 9,10(9',10')-cleavage dioxygenase 1 from Pisum with 78.21% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453435.1)
• Pfam: Retinal pigment epithelial membrane protein (PF03055.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;