Ll_transcript_429842

• Id Trinity: TRINITY_DN52104_c3_g5_i1
• Name Transcript: Ll_transcript_429842
• Sequence: TCACCGTGAATGGACAATTCCCTGGACCAACATTGGAAGTCAACAATGGAGACACTTTGGTTGTGAAAGTCATTAATAGAGCACGTTATAATGTCACCAT TCACTGGCATGGTATTCGGCAAATTAGAACAGGATGGGCTGATGGGCCAGAATTTGTGACTCAATGTCCAATTCGTCCAGGAGAAAGTTATACATATCGG TTTACAATCCAAGGACAAGAAGGCACACTTTGGTGGCACGCTCATAGCTCATGGCTAAGAGCCACTGTTTATGGAGCTTTAATCATTCATCCTATGCAAG GACAGTCCTACCCTTTCCCTAAGCCAAAGCGCGAGACACCCATTCTTCTAGGGGAATGGTGGGATGCAAATCCCATAGATGTTGTAAGGCAGGCCACACA AACAGGAGGAGCACCTAATGTGTCTGATGCTTACACTATTAATGGTCAACCTGGTGATTTTTATAAGTGCTCTACCCAAGGCTCCACAATTGTTCCTATA GATTCTGGAGAGACCAACCTACTTCGTGTAATCAATGCTGCACTCAATCAACCACTTTTCTTCACAATTGCAAACCACAAGTTCACAGTGGTTGGTGCTG ATGCCTCATACCTCAAACCTTTCACCACCACAGTTCTAATGCTAGGTCCTGGCCAAACCACTGATGTTCTCATCAATGGTGACCAAGCACCTTCAAGGTA TTACATTGCAGCACGTGCTTACCAATCAGCCCAAAATGCTGGATTTGATAACACCACCACCACGGCCATTCTTGAATATAAATCAGCACCATGTCCTTCT AAGGGTGTAGCCGCAATTAAACCACTTATGCCATCTCTACCTGCTTATAATGACACTAACACTGTCACTGCCTTCAGCAAAAGCCTTAGAAGCCCAAGAA GAGTTGAGGTTCCTACAGAAATAGATGATAACCTTTTCTTCACTATTGGCTTAGGACTTGACAATTGTCCACCAAATTTCAACTCAAACCAATGCCAAGG TCCTAATGGAACAAGGTTCACTGCTAGCATGAACAATGTGTCTTTTGTTCTCCCAAACAACATTTCAATCCTGCAGGCTCTACACCTTGGAGTTCAAGGA GTGTTCACTACTGATTTTCCCACAAAACCTCCTCTGCAATTTGATTACACGGGTAACGTAAGCCGCTCATTGTGGCAACCGATTTCGGGGACTAAAGTAA CTAAGTTGAAGTTTGGATCAAGGGTGCAGATAGTGTTGCAGGACACAAGCATTGTTACCTCGGAGAACCACCCTATTCATCTTCATGGCTATGATTTCTA TGTTGTAGCTGAGGGATTTGGAAACTTTGACCCCAAGAAAGATACTTCAAAATTCAACCTTGTTGATCCACCTCAAAGGAACACAGTAGCAGTACCTGTG AATGGATGGTCAGTTATCAGATTTGTTGCTGATAACCCAGGTGCCTGGATTATGCATTGTCACTTGGATGTTCACATTGGGTGGGGTTTGGCCACAGTGC TCTTAGTAGATAATGGAGTTGGACTATTGGAATCCATAGAGGCCCCTCCAGAGGACCTGCCTCTATGTTAGCATCATCAAAATATATTATCCAAGTTCAT TGTTGTTTCCCTGCATTGGGAATTTTGCTATGTTTCATTGTTCTTTTCATATATAGATATAAATTGTGTTTAGACTTTATAAGTGATGGTGATGTGGTTT CAACACAAAATGCCATCTGATACGGTCATAAGCCCAACTAGCTAATTTGATCATAGATGTTTGTTATTCTTTTCCATGTTGTTAATGTTATAATCAAGTA TCAGTTTTGATTATGTTTCTGCCCCA
• Tissue: pods
• Gene name: LI_gene_190095;
• Additional information: details;

Expression of Ll_transcript_429842

FPKM

• PAB: 0.8
• PNAB: 3.4
• PS1: 1.1
• PS2: 0.5
• PS3: 0.7
• PW1: 2.2
• PW2: 108.9
• PW3: 76.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_429842

• Blastp: Laccase-12 from Arabidopsis with 78.97% of identity
• Blastx: Laccase-12 from Arabidopsis with 78.97% of identity
• Eggnog: Multicopper oxidase(COG2132)
• Kegg: Link to kegg annotations (AT5G05390)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019459405.1)
• Pfam: Multicopper oxidase (PF07732.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;