Ll_transcript_431829

• Id Trinity: TRINITY_DN52106_c1_g2_i3
• Name Transcript: Ll_transcript_431829
• Sequence: CTTGCTGCTGCAGCTCATGCTGCTGCTAATGGAAGTCCATTCACTATTTTCTACAATCCAAGGGCATGCCCTTCAGAATTTGTTATTCCACTGGCAAAAT ACCGAAAAGCTGTATTTGGGACCCAGCTCTCAGTTGGCATGAGATTTGGTATGATGTTTGAGACAGAGGAATCGGGTAAGCGCAGATATATGGGTATTGT AGTTGGTGTAAGTGACTTGGATCCTTTAAGGTGGCCTGGTTCTAAGTGGCGAAATGTGCAGGTGGAGTGGGATGAGCCAGGTTGTGGTGATAAGCAGAAT AGAGTTAGTGTTTGGGAGATTGAGACTCCTGAAAGTCTTTTTATCTTCCCTTCTTTGGCTTCAAGTCTTAAAAGGCCATTACAATCTGGATTTTTGGAAA ATGAGTGGGGGAATTTGATAAGAAGACCTTTTATAAGAGTTCCTGAAAATGGAACATTGGAGCTCCCGAATTCAATATCAAATCTCTACTCACAATACAT GATGAAAATGCCTTATAAACCTGAACTTATTAACAACAGTGTAGCCTTTTTATCGACCATGCAACAAGAATGTGCTGCTACAAGAGATCCCTTAGAGATG AAGACAACATTGGCGCAAGAGAGCCATAAACATCTTGCCAGTTCAGAAGGCATGCAACCAAAAAATATGAATTCTCAGTTTGTCCCTGACCAATCTAATG TCTTAAACATGCATTCAGTGTCGAAAAGTGATCAACCTTCTAAATTGCACCCACTTGCCAAAAATGATAATAATCTGTCTTCTGGTACAGTTATTGATAC GCCAAAATTAGAATCTGAGGTGTTAACTGATAACATGTTTGACCTCCCTTCCATTAACGACAGTAGTAACATTGAAAAAATGGCTGCAAATCCGGTTATT TCTCAAAACCTTGCTAGCCCAATGACTTTCCTCAATCAAAACCAGAATACATTACTCTGTCAATCTAACCCATGGCCCATGCAGCCTCAGATAGAATCAT CTATATCTCATCATCAACTGATTGATGTGTCTCAATCCGATCCTGCTTTTGCGAATGCTATGTTTCCTCAACTAGACATCGATGACTTGATGATGTACTC TTCATGCCAACCTTTATCAGATTTGCAAGAACAAACTGCGCTCCAAACTCAAGCAGTGAATGCCCCTTTACCTCCAATGAGCCAAGAAATATGGGATCAT TATGTCAAGAATTTCAAGTTTTCATCTCAGGCTGATCATCTAACATCAATGTATCAGCCAGGGATGTATGGCCTAAATGGTATGTCTAGTTCAAACAACA TGAAGGATCTTTCATCTGAGAGCAACAAGCAAAGTGAAATTTGTGTCAATGTGGATGTTAGTAACAGTATAAGTACCACCACTATGGTTGATCCTTCTAC CTCAAGTACCATTTTGGATGAGTTTTACACCTTGAAAGACAAGGATTTTCAGAATCAACCGGATTGCATGGTGGGAAACTTAAGTTCCAGCCAGGATGTC CAGTCTCAGATAACCACAGCAAGCCTAGCAGAGTCACATGCCTTCAACTCTGGTGGTACATCATCAAGCCATGTTGATTTTGATGAAATCAGCTTTTTGC AGAAAAACTCTTGGCAACCAGTAGCTCCTCCACCTATGCGAACTTACACGAAGGTGCAAAAGGCAGGTTCTGTCGGAAGATCAATTGATGTCACCACATT CAAAAACTACGAGGAGCTGATCAGCGCAATTGAGTGCATGTTTGGACTCTATGGCCTTCTGAATGATACCAAAGGTTCTGGATGGAAACTAGTATATGTA GATTATGAGAGTGATGTTTTACTTGTTGGAGATGATCCATGGGAAGAATTTGTGGGGTGTGTCCGGTGCATAAGAATTCTATCACCTTCAGAAGTTAAGC AGATGAGTGAAGAAGGGATGAAGCTTCTAAACAGTGGTGCCTTGCAAGGGATCAATGGTTAGAATTTGAGGTGGCTGCAACAAATATCACTAAGCCATTC TTTGAAAGTAAAGGCATTTTGCTGTGGGATAAGTCCTATGTTACCTAGTCATTATAAAGTTGACATGTAATGTATGAACTAAATTTCACTTATTTGCCAG ACATGTAATGTATGTAAGGTTAGATGTTACAATGGCTCAATGGTTGCATAAATTATGTTGCAATGCACTCTTGGTGGCAAGTGAAAAGTACTAAGCTTTA TTGCTTATCATTGTCATGCTAACCAATCAACCATCCATTACTACATTATTTCCATGCTAGTTGGGTTATAAACTTGAACTTATCAAATGAAAAGAAATAA AAAAATGAAGGAAATGAGCAC
• Tissue: pods
• Gene name: LI_gene_190107;
• Additional information: details;

Expression of Ll_transcript_431829

FPKM

• PAB: 8.9
• PNAB: 18.9
• PS1: 32.8
• PS2: 7.8
• PS3: 16
• PW1: 10.2
• PW2: 4.9
• PW3: 3.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_431829

• Blastp: Auxin response factor 5 from Arabidopsis with 48.19% of identity
• Blastx: Auxin response factor 5 from Arabidopsis with 47.65% of identity
• Eggnog: auxin response factor(ENOG410Y913)
• Kegg: Link to kegg annotations (AT1G19850)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019432536.1)
• Pfam: Auxin response factor (PF06507.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;