Id Trinity | TRINITY_DN52109_c0_g3_i6 |
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Name Transcript | Ll_transcript_431962 |
Sequence | AGCAAACGAAGAAAAATAATAATAATAATAGCATGTTGTTATGTCCACATTAATGTATATGATAATGCGTGTTGTGTCTGTGATTCCTTCTTGTTCATAG AACAGACTCAGAGGGTTGGTCAACCGCGACTTCAATGACCCAAACCCTCTTTTTTCCTCTCTCACCACATTTCCACATAAACCCTACAATTTAATCAAAT CTCAACTCTTTCAATTCCATTCAAATTCAATTTCGAATTCGAATTCGAATTCTACATCCACTTTTACGCATCTATGTCATCCGAGATCGAGGTCGTTGAC GAGGTTCAATCGCGAGATCAGCAATTGCCGTCGGTTTCCTCTTCATCCTCCAACGCCGGTGAAGTATCGGAGGAGAGCCTCCGCAACGATGTGTACACGG CGGCGGCGTACGGGGATTTGGAGAAGCTGCATCGATTGGTGGAGCAAGAGGGTTGTACCGTGACGGAGCCAGATGGATTGGGTTACTATGCGCTTCAGTG GGCTGCACTCAATAATCGCACTGCAGCGGCTCAGTACATCATTGAGCATGGGGGAGATGTAAATGCAGCAGATCATACTGGCCAAACAGCATTACATTGG AGTGCAGTTCGAGGTGCTATCCAGGTTGCAGAGCTTTTACTCCAAGAGGGTGCCCGGGTGAATGCTGCTGATATGAACGGGTATCAGACAACACACGTTG CTGCTCAATATGGTCAGACAGCTTTCCTTTACCATGTCGTCTCAAAATGGAATGCCGACCCCGATGTTCCTGACAATGATGGAAGAAGTCCGTTGCATTG GGCTGCTTACAAAGGTTTTGCAGATTCTATACGTCTACTTTTATTTCTTGGTGCACATAGGGGACGTCAAGATAAAGAGGGTTGCACACCTCTTCATTGG GCTGCTATAAGGGGTAACATGGAGGCATGTACCGTGTTAGTACAGGCTGGCAAGAAGGAAGACCTAATGGTGACTGATAATACTGGCCTCACACCCGCAC AGCTTGCATCTGATAAGAATCACAGACAAGCTGCTTTTTTCCTTGGAAATGCCCGAAGACTGCTTGACAAACGCTATGATAGGAACAGCCGCCTTGGAAA GATTTCCAAGTTAGGACTTGCTCCTGTACTGTGGTGTATAATTTTTGTGCTCTTGATCGTCTATATTCATTCTGTCATCTTGGCAACAAATCTGCCAAAG TTGACAGCTTCTGCTGCTCTTCTTGCATGGCTCGGAGTTTTACTTGCAACTGTGGGATTGGCTATGCTTTACAAGTGTAGCAGGTAAGCAATGTAGTCTT TAAAGTTAAAAGTTTACAGCTTCAGACAAATACTTCCAGGCCATTATATGTCTAAGAACCATTGGTTATTTATATTTTCTAAAAACTTAATGACTTCGAT TTATCTTTTCATGATTCCAAAGACATGTTTTACATTTATGTAATACATCGGTATTTTTTTTGTTTTCTTGTACTGTCGAATCATAATGAAGCAATTAAGA ATGACATAACATGGCTTTAAGATTGTTGGATTTTCGGTAGTTTGAACTACATAAGTATTATTATGTAGATCTATGCTAGTTCAGCAATCCAATGCATTAC TCATGTGTTTTGGCTGGACTATTCGACTTTTTTATGAGTTGTATAGAGGAGATTGCTTCTCATTGGCTGTGTGCAACAGTGTAAGTGGTTTGGACTAAGT TGGTTTTCATGTGCCTAAGGGAATTCGAGATTCTCCACCTTTTTGTGGAGGTTAGCACTGTCCATATCTGTCTATTTACCGTCCGTTGATGCTTGCTTCT TGGTCTATATTCTCCAAGCAGCCTACTTGTACATTGTGAACTACTTAAACTTATGCCTGTAATTGTGTGGCACCTGAGGAGGTATTGTTTTGTACAGTGG TCAATATATGAAGGAAATTTAGAGTTGAACTGACCCACATAAGACATGCATACCATATTAGTTAATTTTTTGGTTTCTGATTTTGTGACCAGTAGCAACT TGTTTCTAAACGCCTAACTTATTTTTTTTAAGATGCTTTTTTATCAGTTTATTTTGTTTTCATAATCTTTCCTTCCCTTTTTACAGCAAGGATCCAGGTT ATGTCAAAATGAATGTGCATGACACTGAGAATATGAAAGATGACGAGCCTCTCTTGAAGATTGAGATAAATAATCCTGCTTTGCTAGCTGGAAACTGGTC CCAGCTTTGTGCAACATGCAAGATTGTCAGACCTCTTCGTGCGAAACATTGTTCTACATGTGATCGTTGTGTGGAACAATTTGATCATCACTGTCCTTGG GTTTCAAATTGCATTGGCAAGGTATTTCTGGGTGATTTTTTTTATTTGCATGCTTTGCATTTAAATGTTAACTGACTATATTAAACTTTTCATTTTGTCA TTGTCTTCAACCGGGGAAAAGGGGATGGGGGGAGAAATTAGTCTCAGACATTTATTCTGGTCCTCTCTTCTCTCCTTCACTAATATCTGTTTTATGTGCC TCCTGAACCTCAAGTGTTAAGCATGCCACATGTTAATAAAGTAACCTTTATGGCAAAGAAAGAGAAGCCCTTATGATCTGATACGTTTTCATGAGGATTT CTATGTTGCAAACAGTTGGGATTGATTACTTTTGATTGAGTGCAGGTGCTACTGATTATTTAGTTTAAATCTGTTTTGTCGCTGCAAAAAAATAGTGACT TGTCTAAGATGATCTATTTGAAATGGTTCTTACAATATGCCATCTAATAGTATTTAAGCGCAGCCCCTTTTCCATTTCCAAAAGTTAAGCATGCAACTTT ATTTTTCTGACTGATTGAATTGACCTGATTTTTTTCCATGGTGGATAATTTGACCTGATTATTACTACACTATGATTACAGAAAAACAAATGGGATTTCT TTGTTTTTCTTGTTCTCGAAGTTTCAGCAATGTTGGTGACTGGTGGAGTTTCTCTTACAAGAGTATTGACTGATCCACTTGCTCCTTCTTCATTTGGAGC ATGGATTCAGTATGTTGGTAAGAATCACGTTGGTGCAGTATCATTTTTAATTGCTGATTTTTTCCTATTCTTCGGTGTGTTCGCTTTGACAGTTGTTCAG GCTAGTCAGATATCACGCAATATTACGACAAACGAAATGGCAAATGCAATGCGGTATAGCTACCTCAGAGGTCCAGGTGGTAGATTTAGAAACCCATATG ATCATGGTATCAAGAAGAACTGTTCCGATTTCTTGATCAATGGATACAATGAAGACGTGGAGTGCATCGAAGAAGTAGGTAATTCAGAGGAGGGTATAGG AATGGAGCCCATTGCAAGAAGCTCAAACTTAACAAATGGAGACTCACATTCTCATTTTAATCGTGCAACAGGCAGTGGAAATAGTCATGTTATTGATGTG AAATCCAACAGTACCACCAACTCCAGAACACATCATGGTAATATTAATGGCCATGTTCATTCTTCACATTGTAGCCATAATAATCATGCCAAAACTAAAA ATGACAGCATTCCAAAGGGCTTAGGTCTTGGTCTTGGCCTTGGGCGGAACACCAAATCTGTTGCACCCTTGTGATATTTACATGTCTGGTTAGTTATGTA CCTAATTATATGTATCATACATAGGCACACGTTTGGGGTAGTTTGCGTTAAATCAATTTATTGTGGCTCTTTTTTACAATACCCATGTTCAATTTTGTGG TATTACTTAAATTTTAGTCTTCTTTGTACTTTCATTTCCCCTCTTTTGTTGTAACTAATTTTAGGGGTAATTTTATTTTCATATCACGAGTACATCGTAT TGGATATGGTGTACCAGGATTTTCTTGTAATGTGACAGAATTAAACAAAAAAGTATAAACACACGTGTATAAAAATATGGTGTTGATATTTAACATTGTT GTATGAATAATATAACACCTAATTTGGTCACTTTGCTAAGGGAGGTTATTACCTAGTGTAAGCTTATCCATTCAGGTTATGATCATGAAATACATGTAAA AACATTTTGAAGCCC BLAST |
Tissue | pods |
Gene name | LI_gene_190130; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_431962
Blastp | Protein S-acyltransferase 24 from Arabidopsis with 78.93% of identity |
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Blastx | Protein S-acyltransferase 24 from Arabidopsis with 78.04% of identity |
Eggnog | Ankyrin Repeat(COG0666) |
Kegg | Link to kegg annotations (AT5G20350) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019453050.1) |
Pfam | Ankyrin repeats (3 copies) (PF12796.6) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |