| Id Trinity | TRINITY_DN52112_c1_g2_i9 |
|---|---|
| Name Transcript | Ll_transcript_429683 |
| Sequence | CACAAAAGTGGCAAATTCATTCCTGAAAAGTGGGAACTTCAACACACAGAAGAAGAATATTTTCACTGTTTGGTAAGAAGTAGGAAAGAGAAAAAGCTGA CATAACTTTAAGCTGAATGAATATCAATAACTGATCCTCCAAAACTCAATGAACTTAACTTAATTACCCATTCAACAACATTCTCAATCTGTAGAAGTTA AGTCAAAGGCTTCCTTAGAGCTTTTCATGCACTCTCTCTCTATGGAGCCACCACACATATCAATTTCCACTATGATTCCCACAGCTTCATGGTTTACACC AAAGAGGCTGCTTGGTATATTTTGTATGATTAACATGTTGAACTATTTGGACCGAGGAGCAATTGCAAGCAATGGTGTGAATGGAAGTAAGGGAACTTGT ACTAAACCCGGGATCTGCACTTCTGGTACCGGAATACAGGGTGATTTTAACTTAAACAATTTCGAGGATGGCATTCTATCATCTGCTTTTATGGTTGGAC TTCTTGTGGCTTCTCCAATATTTGCCTCTCTAGCAAAAAGTGTGAATCCATTTAGACTTATAGGTGTTGGATTGTCAGTTTGGACAGTTGCAACCTTATG TTGTGGTCTTTCTTTTAATTTCTGGTCCATTTCAGTCTGTCGCATGCTTGTTGGTGTTGGGGAGGCTTCATTTATAAGTCTCGCAGCTCCTTTTATTGAT GACAATGCCCCAGTTTCTCAGGTTTGTTTCTTCGTATCTTTTGTCGGTTGTCCTTTTAGTGCAAAACCATCATTATCTAGAAGACCTTTATATTCTCAAG CTCTATTTGACCCAACTACCTGATAAGTTAGTTCAAGGTTTATAAGGTAGCAATAAACTTGTAAGCTAGTTGAAAGCTTATAAGTAAGGAGCTTAAAGCT GAGAACTCGTAATTGAATCAAAATTGTTTGGTAAGATTAGCTAGTGAGCTAGCTAGTAGATGTAGAATGAAATACACTTATAAGCTCATAACTTATTGAA ATAAACCTTTCTGCCAAGCACCAATAAGTAACTTATTTTTTGTCAAATATGCTAGTTGACTAGCTTATAAGCTCCATTATAGTGTTATTAAACACACTCT GTCATGAACCTAAGAAACCTTAGGCATTGACTACATAACTGAAATGAAATGGTACACTGTTTCCACTGTTTTAAGAATTTAGAGCTAGTACTATATGTTA CTTCTTGGTAATTGGAATGTCATTTGTCAGTTTAACTGCTTGTTTTTTTCTTCCGGAAAGCCGTCTCATAGTGTAGTGTATTTATCAGAAAACGGCATGG CTTTCGATATTTTACATGTGCATACCTACTGGATATGCACTTGGCTATGTCTATGGTGGATTGGTAAGTTTTTATTGGTTTTCAACTTTTCATACATCTT TTACATACTAGTAGTAACACCTGATGTGCAGGTGCCGAGGAAGGACTTAACTTGATGCATGAGCTTTTTAGTATTTCTCGCAATTATATCTTTTCAGTAT CTTTTTAGTATTTTTGCCCCATTTGATTTTGATCTTTCGCTGTTTAAAAACAGGTTGGAACTTATTTTGGTTGGCGTTATGCGTTCTGGGTAGAGTCTAT ATTGATGCTTCCATTTGCTATTTTTGGATTTTTTGTGAAGCCTTTGCAGTTGAAAGGTGTACATTTGTCTTGCATTGATTTATTGTAAACCACTTTTATT TTTTCCATCTATAAACTACTTTCGGGTCCAGGTTTCATTCCTGCTAATTCAGAAAAGACACCGGCGCTTGAGACAGCCGTGTCAGGAGTTCAAGGTATAT TACGATTCATGAATTATTTATGCACAAGATATCACTTTTTCCCCAAAGTACTATTACCCTAGATTAATTCTCATGATTAAGAACAACTTTCAGTGGAAAC TATAGATAATTGTTTTGTATATTCATGGCAATTGTATAGATACAAATTATGCTTTTGGAGATTCTGTAAAAAAATCAAGAAACTTTATTAAACTTCATAA ATTTCACTTGTTTAATGCAATCTTATGGCGGCTTCAAATGGCAAAGATGAGCCATTGTCCTTGGCAGAGTTCAGAGATCAAAGCTCAAATGGCCATTTCA GGTCAAAATCTGAAACCAAAATATTTGATCAGTTCTCGAGATTGAAGAACGACATGACAGCGCTTTTGCTTAATAAGATTTATGTTGTCAATGTTCTAGG TTACATAGCATACACCTTTGTTCTAGGTGCTTACTCATATTGGGGCCCGAAAGTCGGCTATAATATATATCACATGACCAATGCAGATTTGGTATTTGGA GGAATTACAATTGTGTGTGGAATAATAGGCACATTAGCCGGAGGCTTTGTTTTGGACTTCATGACAAACACTTTATCAAATGCATTTAAGCTTCTCTCGA TTGCGACATTTATTGGTGGGGCATTTTGTTTTGGTGCCTTCTTATTCAAAAGCATGTATGGCTTCCTTGTGCTTTTCTCTATCGGTGAACTTCTTGTTTT TGCCACACAGGGTCCTGTGAACTATGTTTGTCTCCATTGTGTTGAACCAAGTTTGAGGCCACTATCTATGGCTATGTCTACTGTTGCTATTCATATCTTT GGAGACGTACCTTCCTCACCTCTTGTTGGAATTCTCCAGGATAACATTAACAACTGGAGAATGACCACTTTGATTCTAACAGCTATACTTTTTCCAGCAG CTGGAATATGGTTTATTGGTAAGTCATCATGTTACTTATCACTATTGTAAGATCAAGGATGTTTAATCGATAAAAATGGCACTTCTGGACATGAATATCA TTCATAGTCATGCTAAAAATCATGTCCCCTGCCTAAAAATTAAGCATCAAACCGGTCCGTCAAAGAAAACTTGCACCAATTAAGACCCCTGCAAGTTTTA AAATGTCGCCATAATTTCCGGGATCTTTGAGGGACTTCAATTTACGCTGTGGTTGCCATTTTCATCTCTTAGAGGGAAAGGTAGCATTGCTGGGCATGAC TATCATTAGTCATGCTAGAATTCATGTCGAACCCCTAAAATTAAACAAAATATGTATGAGAAGTGTTACTTGGCCTTATAAAAATGATCTTATCTTGAAG GTAAAGTATTTAAATTTGTATATTCATATTGTCTAGTCCATGGAAAAGTTTTCTGAACATAGTTGATGTGTTTCATATGTATTATCTCAGGAATATTTTT GCATAGTGTGGATAGATCTAATGAAGATAGTGAGCACCAAGTATCAACCATTGAAAGGTCCAGCACCACGCCGTTGCTTCACGAAAAGACTGGAGAAACA TCAGAATCTCTTGCTCAATCCCAAGAATGTTGATTCTCTTATTTCTTTTTATGCCTTTCAAAGCACCATTTATTATGCACATTGAGTCGCTGCAGTGTAA ATACCTTTATTTATTGGTAAAAGTATTGTTTGTATAAGTATTATTTGCTTTCATAGGAGTTATTTACCTCTAAGCATAATGAGAGAGATAGTTGTACTTT GAGAAGATTAGCACACAATACAACCATATAGACACTTCTATTTTCAAATAGTTAAATTGCAGAGTTAACTTAATAGATTGTTG BLAST |
| Tissue | pods |
| Gene name | LI_gene_190153; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_429683
| Blastp | Probable sphingolipid transporter spinster homolog 3 from Arabidopsis with 69.71% of identity |
|---|---|
| Blastx | Probable sphingolipid transporter spinster homolog 3 from Arabidopsis with 69.71% of identity |
| Eggnog | major facilitator Superfamily(COG0477) |
| Kegg | Link to kegg annotations (AT2G22730) |
| CantataDB | Link to cantataDB annotations (CNT0002309) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019418646.1) |
| Pfam | Organic Anion Transporter Polypeptide (OATP) family (PF03137.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |