Id Trinity | TRINITY_DN52113_c3_g3_i1 |
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Name Transcript | Ll_transcript_429576 |
Sequence | GTGGACATGCTGTGACTGTAGAAATTATGCATGCCATGTGGAAGCCACAAAAGTTTAAGTACATATACTTGCTGGCTACTCTATACGTGTTCACATTAAC AATTCCTTCTGCCGTTGCTGTTTATTGGGCTTTTGGTGATGCACTTCTTAACCATTCCAACGCTTTCTCTCTCCTTCCTAAGAACGGTTTCCGTGATGCT GCCGTTATTCTCATGCTCATTCACCAGTTCATCACATTTGGGTTTGCCTCTACACCATTATACTTTGTGTGGGAGAAGGTAATTGGGATGCATGATACAA AGAGCATTTGTTTAAGGGCACTAGCAAGGTTACCAGTGGTGATACCTATATGGTTCTTGGCTATAATTTTCCCTTTCTTTGGACCCATAAACTCTGCTGT TGGAGCTTTACTTGTTAGTTTCACTGTCTACATCATCCCTTCCTTGGCCCATATGCTAACTTACAGAAAAGCCTCTGCTAGACAGAATGCTGCAGAGAAG CCTCCTTTCTTTATCCCAAGCTGGACTGCAATGTATGTACTCAATGCATTCATTGTGGTGTGGGTTTTTGTAGTTGGGTTTGGGTTTGGAGGATGGGCAA GCATGACCAACTTTGTGAGGCAAATTGACACCTTTGGGCTTTTTGCCAAGTGTTACCAGTGCAAGCCCCCAGTACCGCCACACGTCGTGGTGGCACCACC GCCACGTGCCCACCACTGAGCACAGCTGACTCACTTACATCACAACATATTTTAGAGTTCAGCTTCAATCATATTTCCCTCTAGACTTTGTATATCATAA CATGGGCAACAATGTTTAATACTTCCACCCCTTCATTTCATGTGTGCTGGCTGGCTTTTGCATATTTTGTACCTTTCTTTGTTAAATAGTTTCCTAGTGA TTAAAAATAGTGTATCAAATGCTTATGATTCCATGCTATAAATGCATAGGCTAATTAAATTAGATACTTATTTGGTATAATTCTATTTTTCTTGTCCGCT TTTTATGTCTTCGGTGGGAGATACTATAAAGATTTTGTTTGCCTTTCTCTTTTTTTGTTTGCTCATGAATTGCAATCATTATTACATTTTTGTACTAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_190168; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_429576
Blastp | Auxin transporter protein 1 from Arabidopsis with 93.69% of identity |
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Blastx | Auxin transporter protein 1 from Arabidopsis with 93.67% of identity |
Eggnog | amino acid transport(COG0814) |
Kegg | Link to kegg annotations (AT2G38120) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019430187.1) |
Pfam | Transmembrane amino acid transporter protein (PF01490.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |