Id Trinity | TRINITY_DN52115_c0_g1_i1 |
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Name Transcript | Ll_transcript_430649 |
Sequence | AATTAACCTATGTTAAATACAACTATTAAACATCAAGGTTTTCGAGGTTTCGTAAAGCATCGCCCAAATGGTTATTTAAAATCTTCTTGCTGATGTGTCT TCTTTTCCTATTTTCCAATGCAGTCACAGTCACAGTCACACTCACCACTATAGTCTTGTCCCTTGAAGCTTTCATCTTCTATATTACTGTAACACCACAC AGCACAAACACACTCTAAACAATTATCACTTCAGAAGCAAAGTATCATTGATAGAGAAATATGGATTCCAGAAAATTTCTGCAATTCCTAGTTCTTTCAT TCAGTGTAGCACTAGTTCTGTTTATTACTTGGTTTCACCTTCCATCACTCCCAAACAATGATTCTCTACTAGATTGCAACCTTTTCTCCGGATGGTGTAC CTCGAAGAACCGGTTCCGTTCTTTCACAAAGCCTAATCTGATCAAGAAAACTCCATCTTCCACTAACAACCATAAACATGAATATGATGTTCCACACCAC CCTTTAGACCCTCTAACCATAAATGAATTCAACAAAGTTCGCGCCATTCTTTCCACCCATTCTCTCTTTAAGTCCTCATCTTCCTATACTCTCAACTCTA TTGTCCTTGAAGAACCGGACAAAAAGCTCGTCCTCGAATGGAAAAAAGGCGATCCGCTATTGCCTAGAAAGGCTTCAGTGATTGCACGTCTGCAGGGTGT GTCACATGCACTCACAGTAGACCTCACCACTAACCAAGTGATCAGTCATGAAACTGGTTTGGTTTCAGGTTACCCTGTTATGACAATAGACGAGATGCAA GGTATACTCGAGGTTCCATTCAGGAATCTCGAGTTCAACCGCAGCATCACTCGGCGTGGTATTGACATGACAGAAATTTCATGCCTGCCAATATCTTCAG GGTGGTATGGGACACCAGTGGAAGAAAATAGAAGGCTGATAAAGGTGCAGTGCTATTCCAAAAAAGGAACTGTGAATTTCTACATGAAGCCAATTGAAGG GCTAACTGTGCTTGTTGACATGGATAGAAAAGAGGTTATATCCATTTCAGATAATGGACTTAATATTCCTATGGCCAAGGGGATTGACACTGACTACCGT TATTCTGTTCAAAAGCTCAATGGAGAGTTGAGACTATTCAATCCAATATCCTTGGAACAGCCAGAAGGTCCAAGCTTCAAAATTGATGGGAACTTGGTGA AATGGGCAAACTGGGAATTTCATCTGAAACCTGACCCAAGAGCAGGCATCATAATTTCTCAAGCTAAGGTTCGAGACCCCGAAACTTCAGAGTTGAGAAG TGTGATCTACAAAGGGTTCACATCCGAGCTATTTGTACCTTACATGGATCCCACCGATGGGTGGTACTTCAAGACATACATGGATGCAGGTGAATATGGA TTTGGTTTGCAGGCTATGCCTCTAGATCCCTTAAATGATTGCCCAAGGAATGCTTACTACATGGATGGTGTGTTTGCCTCTTCTGATGGAACACCCTATC TTCAATCCAACATGATTTGTGTTTTTGAGAGTTATGCAGGCGATATTGCATGGCGCCATTCCGAGTGTCCCATTACTAACTTGAAGGTTACCGAAGTTAG GCCAAAGGTAACATTGGTTGTAAGGATGGCAGCGGCAGTCGCAAACTACGATTACATCATGGATTGGGAATTTCAAACTGATGGACTAATCAGAGCAAAG GTTGGACTAAGTGGCATTTTGATGGTGAAAGGAACAACCTATGATAATATGAACCAAGTTCCCAACCAAGAATATCTCTATGGCACCCTTTTGAGCGAAA ACATTATCGGCGTAATCCATGACCATTATGTAACATATTATCTCGATATGGACATCGATGGCTCGAACAATTCCTTTGTCAAGGTGAATATCAAGAAGCA GGAGACCTCCGAAGGAGAATCACCAAGAAAGAGCTACTTAAAAGCTGTGAGGAATGTGGCAAAGACAGAGAAAGATGCACAAATAAAACTTAGTCTTTAT GACCCATCTGAATTTCATGTTATAAACCCATCAAAGAAATCAAGGTTGGGAAACCCTGCAGGGTACAAGTTGGTTCCAGGTGCCACAGCAGCTAGCCTGC TGGATCATGAAGATCCACCACAAAAGAGAGCAGCTTTTACAAACAACCAAATATGGGTCACTCCTTACAACAAGAGTGAGCAATGGGCTGGTGGCTTATT TGTTTATCAGAGCAAAGGTGATGATACTCTACAAGTGTGGTCAAACAGGTTAGAGACTCTTTTCAAATTCCTACCTTTCTGTCTAGATTATTTGGGAGTA TCCGCAATTGCGGTCACCACCATCACACTTCGTGCAAAAGTAACATAAGTGCAACCACAATTTAGAACACTGCTCTAACCCCATTTATGTAGAGGAACAG ACAACTTTCATAGTACTATGAGAAATATAAGAGATACAAAACAAATTGAAAAATAACACAATTTTCCCCTATAAATATTAAAAACGATGATTAGGTACTC ACTCTAATCAAATCCAAAACTCCATAGCAATAGAAATTGTCACTGCTTAAGATCACCCTATTGCACATTAACCAAATGGGACAAACAACTGCATGTCATG CCATCATACCTTACCCTTTCACCTTTCTTGATATGGAATAGTTGTTATCAGAGCCAACTAAATACCCTCTTCCAGGTTCCCTTAGGGTCCGTTTGCGAGT TGGATTTTGGAGGGCAAAGGAGGGAAGGGAAAGACTCAGAAGTCATAAAATACACTTGTAACATGACTCTTAAGTCTCTCATTTCCCCTCATTCCCCTCC AAAATCAAACTCACAAACTAACCATAGGGTTTGTTGCGAGTTAAGTTATGAGAGGAAGAAAAGAAGATTTGAGGTTTCAGAGTCATCTCAAAATTTATTT CATTACTCCAAGCCTTTTTCTTCCTCTGTTATCCTTCAAAAACCAGCTCGTAAACAAATGACATAAAAAAGTCTAGGTGAGCACCATCCTCCATTACACC CCAGAAAAACGTAATGTATTCCACTACAACACCCCTTTTCTACACATTATCCTTTGAAGTGAACCTAACCAAGAGCACTTTCAAAAAAAAATCTCAGTTT GGATTTTGAAGATATGACCAAATTCAAAGATAATGATGAATCCTGGACCAGTCATGCAACAATTTTTCCAATATGATAAGATTGATAGTCCTTAGCAATG TTTTAAATTGCATTCCCAAATGTCTCCGATAGGGTTTGGGAGAATCTATAAATTATGGTTGTCATCCTGATTGTGATAGCGCTTACTAGTATGGTGGTCA TTGCGGCAGCTGTGGTGCTGATTGCCGCTGTGATATATCATGATAAAAAATTATTTTTTTGAATTCCATGTGGTTACTTGCAGCCCGATGTGGTTGTGTT GCGACCTAATGCCTTTGTGTTGGTTGCGACCCGTTACGACTATATCATTGTGATTGTGACTAAGAGTCACACCACATTTATAGTGTGATTCATAATCACC GTAACTACCAGTATTGCGGCTCATAAAGTTTATAAGGAGGAAGGACCATAAAACTAATGCCTTAACAATGGAACAATGACTCTTCCCATACCTTGATAAC AATGAAACTCTCCGGTAGTCGTAGGCTCCCCGGTCACGAATCTAGTCCAACAATGTGGTCCACGGTTAAAATCACTAATAACAAAATTAGGTCATATTGG CCACATTTTTTCAAAAATTACACTAAAAGTGGAAATGAATATATTCTTACACTTAACACAAGTTGGAATAATTAACTTACAATATTCTTTTACCATTACA TAAGGCATAGTTATTGTTTAGTATGTATTTGAATTTCATGCCTACTTTGACTTTTAAGAAACCATTGCATTGATACATTTCTCAAATTGTTGATATTTTT ATTGTTAGGGATCGTCCAATTGAGAATAAGGACATTGTGTTATGGTACACAATTGGATTCCATCACATACCATGTCAAGAGGATTACCCTATAATGCCTA CAGTGTCATCAAGCTTTGATTTGAAACCTGCCAATTTCTTTGATAGAAATCCAATCCTACGAGCTCCTCCCAATTTCAAAGAAGATTTACCTGTTTGCAA GGCTCGTGATTCAACTTGAGATTCCACTCTATTTAATGCTTTTATCAATACGAAAAAGCGAGCATTCACTTATGAATATATTAAAAAAGTTACTTCTCAT CTTATTCGTTCATTCTATGAAAATCTAATGATTCATGTGATTTTAATTAATTATTAGATCTGAACCATTAGATTTTCATAAATGAATAATTAAAATGTGG AATATGTTTTTTTAACCTAAGAATGAGTGTATCTCCTATCATGTTGATTCCTTATTATTTTATCTTATAAATCTTATAACTGATAATGAAGATGACATAT ATCATTTTAAGTCATTAATTAATGTAAAAATATTAGTATGTACTTCAGGTCATTTTGTTGATGGATTTGTAATAGGAGTGGGATTTAATATATCTCAAGT AAATATGTAGCAAATGAAGTTTAAGATCTTAAGCTTTATGTAGTTAAGATGTGAAATATCTTGTAAAAAAACATTAATTGTTAAAGTGTAAAATATAATA AAAAGAAGTATTTGTACAATATTTCATGTTAAATTGTTACAGAGGCTACTTGTTTGGGTTCACAAATTCAACAATGGCAAATATAATAAAAGAATATTAA TTGTGC BLAST |
Tissue | pods |
Gene name | LI_gene_190179; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_430649
Blastp | Primary amine oxidase from Arabidopsis with 60.47% of identity |
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Blastx | Primary amine oxidase from Arabidopsis with 60.47% of identity |
Eggnog | amine oxidase(COG3733) |
Kegg | Link to kegg annotations (AT1G62810) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019437496.1) |
Pfam | Copper amine oxidase, N2 domain (PF02727.15) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |