Id Trinity | TRINITY_DN52115_c1_g5_i2 |
---|---|
Name Transcript | Ll_transcript_430659 |
Sequence | TGGCGTCTTCTTCCTGTTGGCACTGACCCTGATAACCTACCTGAAAAGTGGCTGTGTAGCATGCTTAATTGGCTGCCTGGAATGAATCGATGTAGTTTTA GTGAGGACGAAACCACAAAAGCTGTTATTGCATTATGCCAAGGACCACCTCCTGAAGGTCAAAGCAATCTGCGAAATTTTTCTGCAAGTGTTATTGTAGG TGGAACTGCATCAAGTGCCCAGCATCCTGAACAACACCAACTAAACCACAGTCTTCATGCAGTGACTTGTGGGAAGAAAAAAAATGGGAAGGAGATGCAT AATTCTGCCTATAAAGGTGGCACTTCTCAAATGACTGATGCCGATGCTCTGAAGGAGAAACACAAAAATAATCAGAGAATGCTGGACCAGAATCCTGCTA ATGGTGATAAAAAGAATATGATGGTGAAAAGCAGGAAGAACCCCAGCAAAGATTGTTCTAGGCCATACAAGAAAAGTAAGATTGGTGGTATGCATTCCAC CAATGAAGAGTGGATTCTAGAACAGGGTGAGACCACAAGGAATATCAGTTTACCAACTACTTCAGTTGGTAAAAATCAACATAGGCAGAAAGGTCGCTCC TCTTCAAAGGGCTCCATATGCGATGGAAGGGGTAGGCTACACGTTTCTGTTGAAATAACAAAAGATAAAGGCAAGAGTTTCTTGGATGAGGGATACCTGG ATTTGGGAAATCATGATACCGATGGTGGTGTTAAAAAGAGGAAATTGAAGGAGTACCAGGATACTCCATTACTGGAGGGCAGGGTCTCTGTGCAGGATTT TGGTGATTCCGGGAAGGAAAAAAAGGCAAGACAATCAAAATCTGAAGGTAGGGAGTTCGGTTCAAGTAAAGGCAGTGGTAGGACAGACAAAAAAGGTAGT CATACTAAGAACCAGGAACTCAGGCAATATCCAGGGAACACTCTGTCAGAACGGAGCTTGGGGCCTGTGCAGGCTTCTGCTGCCGCCACCACTTCAAGTT CTTCCAAAGCTAGCTTCCAGGAAGTGAAGGGCTCCCCAGTGGAATCAGTTTGTTTCTCGCCTATGAAAATTTTAAATACAGATAGGTCTACAAAAAGGGA ACTAATTCGGAAAGGTGGCTTTCATGATACTGTTGTGGTGAGTGGTCCACAACGATGCTCAGACGGTGAAGGAAGTGATCGATCTAAAACAGTTAAGAAG GACAGAAGTGATGGCAAAGTAAAGCTGAAGAAGTTTGGGTTCAAAATTGATGAAAGTGAGAATATACATATTGGCAAAAAAGATAATACAGAAAAGGAGA AAGGGAAAAAAGAGGATCAATTATATAAAAAGCATGACGTCCAAGAAGTTGGTATAGATGCCATTTGCAAGCAGGAGTTGCCTGCTCCTAGTCAGAATGA GTTGCTAGACTGTGATGCTGAAAGATCTTCAAAGAGGTCTCTTTCTGAAAGAACTGATCAAGAAGTGATTGAAAAAAGGAAGTTGTCATTGCTACCCTCT GGAGGTGATCAGGTTGAGGTATCAGGTTGCTTCCCTCGACCATTTGTTGGTTTGCACAAAGGAAATGGAGACGTGGAAGTTGATCCTCCCAAAGTAAATG ATGCATTGAAGCTGCAAAAAAGGCAAATTAGAAAGGCTGATCATCAAAATGGTACTCAGCAAATTGGTTCAAAACATCCCAAAGTAAAGGATTCTAACAG TCATACCACTGCTAACTGTGCTTTGAAAGATGCTAAAGATCTGAAGCATTTGGCTGACCGTCTTAAGAATTTTGGATCCACTATTGACAGCACGGGGATA TACTTCCAGGCAGCACTTAAGTTTCTTCATGGAGCCTCTCTATTAGAATCTAGCAACAATGACAACACAAATGAGATGTTTCAATCAAAGGAAATATATA GTAGCACAGCAAAATTGTTGGAGTTTTGTGCTCATGAATTTGAGAAATCAAAAGACATGGCTGCAGCTGCTCTGGCTTACAAGTGCATGGAGGTGGCATA TATGAGGGTAATATATTCCGCAAACACTAGTGCCAGCAAAGATCGACATGAGTTGCAGACAGCTTTGCAATTGGTTCCTCTTGGTGGATCTCCTTCATCA TCTGCCTCTGGTGTTGACAATGTTAACAACTCTACAACAGCAGACAAGGTTGCTTTGTCCAAGATTATCAGTTCGCCACAAACTGTTGGAACCCATTTTA TTGCTGCTCAAAATCGTCCCAATATTGTGCGGTTGCTCAGTTATGCTCAGAATGTAAATACTGCCATGGAAGCTTCAAGGAAATCACACCATGCTTTTGC TGCTGCGAATTCAAGCCACGGTGAGGGCAAGCATGCAGTTAGTATCTCCTCCGTCAAGCAGGCTCTTGATTTTAGCTTTCATGATGTGGAGGGGTTACTA CGTTTGGTACGACTGGCTGTGGAGACCATTGCTCGTTGAAGGGTCCACATGGTCACCAGATAATTCTAGCCTTTGAAGAGCTTATGTTTCTTGGTCATTT TTTATGCTTTACTGAGATAAAAAGATAGCCTAAACCTTTTTATAAAGAACAAGGTTTACTATCTTGAACCTAGAGCCACTGTTAAAAACAGTGAAGCTAG TATTTTTTTATGTACATGTTTGCCATTATCAGTGAAATAGAAATTCCAGTTTGCATTCTAGAAGATTTAGTTCCTTAATGTTGTGTACAAGATTGAATAC TATGGCAAACCTTAAGATAGTTTGGAGGTATCAGGTTTCAGAAGTCAGTTTCTACAAAGCAAATTCTAAGGCTCCTATGATATGTGCAATTATGGTACTT ATGGCTGAAAATTCTGCCGGAGCTTCTGGGCTTTACATTTACTGTACTTATATGCATCTCCTGGTGGAAACTGTGCTGTCTCCTCTTGGTTCACTCCCTC TATAGAATGAGGAGTTGAAGGGACTCGGATTAAAGTTGTCTTTTATTATTTTGGGATCACCACTGTCAGCACTATTTTGTTTCCATTCTTCTTTGTTGAT AGAGAATGAACATAAAACAATAAAAAAAAGGGGGATTTACAACAGAAATTTATGAACTGAGTGCAAGGCGTCCCTGCCTTATGCAGAATCTGACAGGATG AGCACCTGAGGCAAATTTCAGATGTGACTGCTGTTTTGCTGGTTCATATCTCCTTCCCCTTAACCCTTAACAGTTAATACATTAAGTACATTTTTCACAG CGGCCTTTCGGCCATAGAGTATTAAATTTTGACCTGTCCACAGTGTTAAGTCTCAACTTCTGATTTTTAATGTACAGAGCTACATTCTTCAACTTCTATG CTTTAATAAAATTAAGCAAAGCTCCTTTTACTCTCCGTTTGAATGCACCATTTTGAATCTTCTAATGTTATC BLAST |
Tissue | pods |
Gene name | LI_gene_190185; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_430659
Blastp | - |
---|---|
Blastx | - |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019428273.1) |
Pfam | CW-type Zinc Finger (PF07496.14) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |