Ll_transcript_430817

• Id Trinity: TRINITY_DN52120_c0_g1_i15
• Name Transcript: Ll_transcript_430817
• Sequence: CGAAACAGTACGAGGGTGTTCCAGTTTTGCCCTTGTCTCTGGTTCAGCATTTTCTTAGGGCTTGTGAGAGTTGGCTTTCACTTGGGCACCATCAAAATGT GATTTTGTTCCATTGTGAGAGAGGGGGTTGGCCCCTTTTGGCGTTTTTACTTTCGAGCTTTTTGATTTTTAGAAAGGTTCATAGTAGTGAGCGTAAAACC CTCAATATGGTTCATAGAGAGGCGCCAAAGGGTTTGTTACAGTTGTTGTCACCTTTTAACCCTTTTCCCTCTCAGCTTCGTTATATTCAGTATGTTGCTA GAAGGAACATTGTGCCGGAGTGGCCGCCACCGGAGCGAGCTTTGTCCCTGGATTGTGTCATTCTTAGAGCAATTCCTAGTTTTGATTCACAAAATGGGTG TAGGCCAGTGATTAGGATTTATGGTAGGAATTTACTTAGTAACGGTGGGCTGAAAACTCGGATGATCTATTCCATGCACAAGAAAAAGAAGACCTTGAGG CATTACAGCCAGGCAGACTGTGATGTTATTAAGATCGACATTCAATGTTTGGTGGAAGGAGATGTGGTGTTGGAGTGTGTCCATATGGATTTAGATCCGG AGAGAGAAGTGATGATGTTTCGTGTAATGTTCAACACGGCATTTATTCGATCCAACATATTGATGCTGAATGCTGAAAACTTGGACATGCTGTGGGATTC AAAGGAGCGGTATCCAAAAGGCTTCCGGGCTGAGGTTCTGTTTGGGGATGTTGAAAGCACTAGTCCTCCAAGGGCTCCAACAGCCATGTTAAACGGTGAG GAGAAGGGTGGATTGCCAATTGAAGCATTTTCAAAGGTTCAAGAACTTTTTAGTGGTGCAGAATGGTTTCAAAGTGGTGATGCTGCTGCTGCTGTCTGGT TGCTTCAACAACTTAGTGTGTTAAATGATGTCAAAGAGTTTTCGAAGTTGCAAGGCAAAGGAAGTTGGTATTCATCACCTGCTGACTCTGAAGATGAAAA TAATGAATCAAGCATTGCTGATAGTTCAGATGACACATTTGATGTTATTTCGAAGACTTCTTCTGTCGATCCTTCAAAATTATCGACAGTTGACACCTCT GATTCATCTCATTTAGCTTTTGAGAGTGATGGTGGAAATCATGCAAGTCTCACTTCAAGAGCACCTGATCAGTCATTGACTGACAATGTTCCATCAACTC ATCATTCTCCACTATCACCTTCACCAGTTCCTGCTACTCAATCCAAGCTTCCATTACCAGCACAAGCATCACCACCTCCACAATTGTCTAATAAGGAGCC TTGGCTACCATTGTCTGAGAAAGTGCCTCCTCCTCCACCTCCTCCACCTCCTCAACCAATGTCTAAAGGGACTTCTTTTGTTTCGCCCCCACCACCTCCA CCGCCTCCTGCTCATTCATCTACTACTAACGAGAAAAATGCACCACTACCGCCCCTACCATCAAGGAGTCATAATATCAGCAAGGCTTCTACAATGTCTC CACCTCTGCCACCCTCTCCTTTAGGTCGTAACACTAATAATGCTACTATCCCGACTCCACCCCAACCCCCTCCGATACCTATGCAACTAGGTTCAGCTCC CCCACCTCCACCTCCACCTCCACCTCCACCACCCATAGGTCACAATGCTAGCAACATTTCTATGGCACCTCCGCCTGTAAGTGGTAATGCCAACAGTTCT CCTACTCCACCTCCGCCTCCTCCAGGACCTGTAAGTACAGGTTCAGCCCCTACACCTCCACCTCGTCCTGGACCTGTACACACAAGTTCAGCCCCACCAC CTCCACCTCCACCTCCCCCAGGATCCAGGCAAACAGGGTCTGCCCCTCCACCTCCACCTCCCCCAGAATCTAGGCAAACAGGGTCAGCCCCACCACCTCC ATCAGGATCTCGACAGACAGGTTCACCCCCACCGCCTCCACCTCCACCTCCACCTGGATCTCAACAAACAGGGTCAGCCCAACCGCCTCCACCTCCTTCA GGATCTCGACAAACAGGGTCAGCCCCACCGCCTCCACCTCCTCCAAGATCTCGACAAATAGGGTCAGCCCCACCGCCTCCGCCTCCCCCAGGATCTCGAC AAGCTGGGTCAGCCCCACCGCCTCCACCTCCCCCAGGGTCTCGACAAACAGGTTCAGCCCCGCCAACTCCTCCAGGCCTACAAATGGGTTCAGCTCCACC ACCTCCACCACCAGCACCAAGGTCTCTGAGTGCTCCTCCTCCTCCACCTGGTCGTGGTGCAATGCCAGTGCCACCACCCCCACTTGCAGGAAGGACCCCC GGTGTGCCACCACCACCAAGCAAAGCTTCTTTAGCAACAACAAATGTTGGAAAAGGTCGTGGGACCGCTGTTGCTCCAAAGAAAACTCTGTTAAAGCCCT TGCATTGGGTGAAGGTTGCTCGAGCAGTAAAAGGGAGTCTATGGGCTGATTCACCGAAACAAGATAATGAATCAAGGGCCCCTGAAATAGATATATCAGA ACTTGAGAGCCTGTTTTCAGCAGCATCTGTTTCTGATGGGAGCAGTATTAAAGGTGGAGGTCGACGAGGTACTAACATCAACAAACCTGAGAAAGTACAA TTGGTTGACTTACGTAGAGCATATAATTGTGAAATTATGCTCTCTAAAATCAAAATTCCTTTGCCCGATATGCTTAATGCAGTTATGGCATTGGATTCTT CTGTTCTGGATATCGACCAGGTTGAGAATCTGATCAAATTCTGTCCCACAAAAGAAGAGATGGAGATGTTGAAGGTACTCCCTCCTTACCCCCTGTGCAG GAACTGATGGCAAATTGTGTGAACTTTAATGCATGATACTATTTAATCTGATAGCATTGTGATAGTTCAGTTAATTGAATCTCGGTTTTGATGTTTTAGT CCTTCTGTTTTTTATGCTTGGTTCCAGGTACAAACGCTTGAATCATATCATTGTAAATTTGTTTGTATAGATGAAGATTTTCACCATTGCACCGATCAGC ATTTATTTTGTTAGGAAGAACATAGAGCAGATATTCCTGTAGAGTTAAAGTATTAATATTAATGCATTGTGTTGACTTGTTTCGTGTTGGTCAAAAGAAT CTGTCAGTCATGATGGATTTTTTTTCTTTTATTTATTTATAATATTAATACGGCATTATATGTGGAAAATTTAAGCTTAAACCTTTTAAATAAATTAAAC TGTGAACCTTTATAATGCTACATATAATTTGTTGAAAATTTGCTTCAAATTTAATCTAAAGGAATTCTGAAACATGTATGACATGCTACCTTTTTTAATA GGAATAAAGGGAATTGTACTTTCTTTTTCCTGACTAAAAATCACTGCTTTTAGAATTATACAGGGAACAAGGAAATGCTTGGGAAGTGTGAACAGTTCTT TATGGAGCTGATGAGTGTTCCACGTGTAGAAGCCAAGTTAAGGGTGTTTGCTTTTAAAATCAGCTTTTCTTCTCAGGCTTGTTTCTTCAGGTGAGTGATC TAAGGGTATATTTGAATACTATCAACGATGCAGCCAGAGAGGTGAAAGAATCTGTAAAATTGCGTCAAATAATGCAGACTATTCTTAATCTAGGAAATGC CTTGAATCAAGGAACAGTACGGGGATCAGCAGTGGGATTCAAATTGGATAGCCTTCTTAAATTATCTGATACTCGTGCAAGAAATAATAGAATGACTTTA ATGCATTATCTGTGTAAGCTTCTCACTGACCGAATGCCGGAATTGCTAGATTTTGACAAGGATCTTACCCATTTGGAAGCAGCTTCTAAG
• Tissue: pods
• Gene name: LI_gene_190234;
• Additional information: details;

Expression of Ll_transcript_430817

FPKM

• PAB: 0.1
• PNAB: 0
• PS1: 0.4
• PS2: 0.3
• PS3: 0.3
• PW1: 0
• PW2: 0.3
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_430817

• Blastp: Formin-like protein 14 from Arabidopsis with 73.22% of identity
• Blastx: Formin-like protein 14 from Arabidopsis with 73.22% of identity
• Eggnog: actin cytoskeleton organization(ENOG410XT5Z)
• Kegg: Link to kegg annotations (AT1G31810)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019421745.1)
• Pfam: C2 domain of PTEN tumour-suppressor protein (PF10409.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;