Id Trinity | TRINITY_DN52120_c0_g1_i5 |
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Name Transcript | Ll_transcript_430799 |
Sequence | CGAAACAGTACGAGGGTGTTCCAGTTTTGCCCTTGTCTCTGGTTCAGCATTTTCTTAGGGCTTGTGAGAGTTGGCTTTCACTTGGGCACCATCAAAATGT GATTTTGTTCCATTGTGAGAGAGGGGGTTGGCCCCTTTTGGCGTTTTTACTTTCGAGCTTTTTGATTTTTAGAAAGGTTCATAGTAGTGAGCGTAAAACC CTCAATATGGTTCATAGAGAGGCGCCAAAGGGTTTGTTACAGTTGTTGTCACCTTTTAACCCTTTTCCCTCTCAGCTTCGTTATATTCAGTATGTTGCTA GAAGGAACATTGTGCCGGAGTGGCCGCCACCGGAGCGAGCTTTGTCCCTGGATTGTGTCATTCTTAGAGCAATTCCTAGTTTTGATTCACAAAATGGGTG TAGGCCAGTGATTAGGATTTATGGTAGGAATTTACTTAGTAACGGTGGGCTGAAAACTCGGATGATCTATTCCATGCACAAGAAAAAGAAGACCTTGAGG CATTACAGCCAGGCAGACTGTGATGTTATTAAGATCGACATTCAATGTTTGGTGGAAGGAGATGTGGTGTTGGAGTGTGTCCATATGGATTTAGATCCGG AGAGAGAAGTGATGATGTTTCGTGTAATGTTCAACACGGCATTTATTCGATCCAACATATTGATGCTGAATGCTGAAAACTTGGACATGCTGTGGGATTC AAAGGAGCGGTATCCAAAAGGCTTCCGGGCTGAGGTTCTGTTTGGGGATGTTGAAAGCACTAGTCCTCCAAGGGCTCCAACAGCCATGTTAAACGGTGAG GAGAAGGGTGGATTGCCAATTGAAGCATTTTCAAAGGTTCAAGAACTTTTTAGTGGTGCAGAATGGTTTCAAAGTGGTGATGCTGCTGCTGCTGTCTGGT TGCTTCAACAACTTAGTGTGTTAAATGATGTCAAAGAGTTTTCGAAGTTGCAAGGCAAAGGAAGTTGGTATTCATCACCTGCTGACTCTGAAGATGAAAA TAATGAATCAAGCATTGCTGATAGTTCAGATGACACATTTGATGTTATTTCGAAGACTTCTTCTGTCGATCCTTCAAAATTATCGACAGTTGACACCTCT GATTCATCTCATTTAGCTTTTGAGAGTGATGGTGGAAATCATGCAAGTCTCACTTCAAGAGCACCTGATCAGTCATTGACTGACAATGTTCCATCAACTC ATCATTCTCCACTATCACCTTCACCAGTTCCTGCTACTCAATCCAAGCTTCCATTACCAGCACAAGCATCACCACCTCCACAATTGTCTAATAAGGAGCC TTGGCTACCATTGTCTGAGAAAGTGCCTCCTCCTCCACCTCCTCCACCTCCTCAACCAATGTCTAAAGGGACTTCTTTTGTTTCGCCCCCACCACCTCCA CCGCCTCCTGCTCATTCATCTACTACTAACGAGAAAAATGCACCACTACCGCCCCTACCATCAAGGAGTCATAATATCAGCAAGGCTTCTACAATGTCTC CACCTCTGCCACCCTCTCCTTTAGGTCGTAACACTAATAATGCTACTATCCCGACTCCACCCCAACCCCCTCCGATACCTATGCAACTAGGTTCAGCTCC CCCACCTCCACCTCCACCTCCACCTCCACCACCCATAGGTCACAATGCTAGCAACATTTCTATGGCACCTCCGCCTGTAAGTGGTAATGCCAACAGTTCT CCTACTCCACCTCCGCCTCCTCCAGGACCTGTAAGTACAGGTTCAGCCCCTACACCTCCACCTCGTCCTGGACCTGTACACACAAGTTCAGCCCCACCAC CTCCACCTCCACCTCCCCCAGGATCCAGGCAAACAGGGTCTGCCCCTCCACCTCCACCTCCCCCAGAATCTAGGCAAACAGGGTCAGCCCCACCACCTCC ATCAGGATCTCGACAGACAGGTTCACCCCCACCGCCTCCACCTCCACCTCCACCTGGATCTCAACAAACAGGGTCAGCCCAACCGCCTCCACCTCCTTCA GGATCTCGACAAACAGGGTCAGCCCCACCGCCTCCACCTCCTCCAAGATCTCGACAAATAGGGTCAGCCCCACCGCCTCCGCCTCCCCCAGGATCTCGAC AAGCTGGGTCAGCCCCACCGCCTCCACCTCCCCCAGGGTCTCGACAAACAGGTTCAGCCCCGCCAACTCCTCCAGGCCTACAAATGGGTTCAGCTCCACC ACCTCCACCACCAGCACCAAGGTCTCTGAGTGCTCCTCCTCCTCCACCTGGTCGTGGTGCAATGCCAGTGCCACCACCCCCACTTGCAGGAAGGACCCCC GGTGTGCCACCACCACCAAGCAAAGCTTCTTTAGCAACAACAAATGTTGGAAAAGGTCGTGGGACCGCTGTTGCTCCAAAGAAAACTCTGTTAAAGCCCT TGCATTGGGTGAAGGTTGCTCGAGCAGTAAAAGGGAGTCTATGGGCTGATTCACCGAAACAAGATAATGAATCAAGGGCCCCTGAAATAGATATATCAGA ACTTGAGAGCCTGTTTTCAGCAGCATCTGTTTCTGATGGGAGCAGTATTAAAGGTGGAGGTCGACGAGGTACTAACATCAACAAACCTGAGAAAGTACAA TTGGTTGACTTACGTAGAGCATATAATTGTGAAATTATGCTCTCTAAAATCAAAATTCCTTTGCCCGATATGCTTAATGCAGTTATGGCATTGGATTCTT CTGTTCTGGATATCGACCAGGTTGAGAATCTGATCAAATTCTGTCCCACAAAAGAAGAGATGGAGATGTTGAAGGTACTCCCTCCTTACCCCCTGTGCAG GAACTGATGGCAAATTGTGTGAACTTTAATGCATGATACTATTTAATCTGATAGCATTGTGATAGTTCAGTTAATTGAATCTCGGTTTTGATGTTTTAGT CCTTCTGTTTTTTATGCTTGGTTCCAGGTACAAACGCTTGAATCATATCATTGTAAATTTGTTTGTATAGATGAAGATTTTCACCATTGCACCGATCAGC ATTTATTTTGTTAGGAAGAACATAGAGCAGATATTCCTGTAGAGTTAAAGTATTAATATTAATGCATTGTGTTGACTTGTTTCGTGTTGGTCAAAAGAAT CTGTCAGTCATGATGGATTTTTTTTCTTTTATTTATTTATAATATTAATACGGCATTATATGTGGAAAATTTAAGCTTAAACCTTTTAAATAAATTAAAC TGTGAACCTTTATAATGCTACATATAATTTGTTGAAAATTTGCTTCAAATTTAATCTAAAGGAATTCTGAAACATGTATGACATGCTACCTTTTTTAATA GGAATAAAGGGAATTGTACTTTCTTTTTCCTGACTAAAAATCACTGCTTTTAGAATTATACAGGGAACAAGGAAATGCTTGGGAAGTGTGAACAGGTTCT CTCAATACTTTTAGTCAATGAATTGTTGCAAGTCCCAATTGTCGGTATTGATTAATTTTTTATATGGATATCTTTATCAGTTCTTTATGGAGCTGATGAG TGTTCCACGTGTAGAAGCCAAGTTAAGGGTGTTTGCTTTTAAAATCAGCTTTTCTTCTCAGGTATATTATCTGGATTATGATTATCTGTATATGGTTTTG TGTTCTATTGCTATTAATAAGATTTCGTGCTTAAAGGCTTGTTTCTTCAGGTGAGTGATCTAAGGGTATATTTGAATACTATCAACGATGCAGCCAGAGA GGTGAAAGAATCTGTAAAATTGCGTCAAATAATGCAGACTATTCTTAATCTAGGAAATGCCTTGAATCAAGGAACAGTACGGGGATCAGCAGTGGGATTC AAATTGGATAGCCTTCTTAAATTATCTGATACTCGTGCAAGAAATAATAGAATGACTTTAATGCATTATCTGTGTAAGCTTCTCACTGACCGAATGCCGG AATTGCTAGATTTTGACAAGGATCTTACCCATTTGGAAGCAGCTTCTAAG BLAST |
Tissue | pods |
Gene name | LI_gene_190234; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_430799
Blastp | Formin-like protein 14 from Arabidopsis with 73.22% of identity |
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Blastx | Formin-like protein 14 from Arabidopsis with 73.22% of identity |
Eggnog | actin cytoskeleton organization(ENOG410XT5Z) |
Kegg | Link to kegg annotations (AT1G31810) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019421745.1) |
Pfam | C2 domain of PTEN tumour-suppressor protein (PF10409.8) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |