| Id Trinity | TRINITY_DN52124_c0_g1_i15 |
|---|---|
| Name Transcript | Ll_transcript_430884 |
| Sequence | ATTATACAGAGAATATTGAATGGTTGCGTAAGTTGAAACCGTCCTCAACACCAATTACAAGTTACTCAATTCCCTTCTCAATTTCAGGTACCTTCTTCTC CGTCTTATTCTCCACGTTCTTTTTTCGCACTGCACTCTTATCAATTCAATTCGATTGCTGTTTATCTTTTCAGTTGCTCTTTAATGACTTCCAAATTTTG ACCCTTCAAACCCCACAACGTTAAAGCTCAGATCTGAACTCAAAGTTAGATACTTTCCTTCAAATGCTTCATTGGGTCATAATCAAAATCATTTTTTGTT GTGATTTTTAAAACCCAAGCTTCAAAAAGGCCAAACATGTCTGGTGCCATAGACATGGACCACGTGGGGTTTTCAAAAGCCAAATCCACGGCGGCTCCGG CCGCCGGTCACGGCAAGAAAACGGCCCCGGTTTCAATGGATCACGTGCTACTTGCATTGCGTGAGACGAAAGAAGAGAGGGATCTTCGAATTCGGAGTTT GTTCAATTTCTTTGATGCTGCAAACAATGGGTACTTGGACTATGCTCAAATTGAAGCAGGGTTATCTGCACTGCAGATACCTCCTGAGTATAAGTATGCT AAGGAACTGTTCAAGGTGTGTGATGCTGACCGCGATGGGAGGATCGATTATGGTGATTTTCGACGATATATGGATGATAAGGAGTTGGAACTTTACCGAA TTTTTCAGGCTATTGATGTTGAACACAGTGGCTGCATTCTACCTGAAGAGCTTTGGGATGCACTTGTTAAGGCTGGTCCAAGTGGAAGATGTTTAGGCCC CTCTAGCATGTGGTCCTGGGTTTGATCCCATGATTATGTGTATGGAAGAAAACATTGGGAGGGGTCCTTGCTTATGCACTTGAACTATCCAAGAGATTAG TCTCTAAACTATTTGGTGAGAGATTTTCTAGAAAAACCAAAAAGGAACTGAGTAGCCTTTCTGAAGACTTGTTTATAATCAAACACAATAGTATTTCTTG ATAAATATAGTCGACTCCACTTAGTGGGAAAGGGTCTTTTGTTGTTGATTGCTAAGTTAGTATTCTCTTCATCCTTCTATAATATTATTACTTTTCAAGT GACATGAACTTGTTGTTGGCTATATTGCTTACATTTTCCATTTCCATGAGTGGTCCAAGTAAAGACATATTATCATTCTCCATGGGTTGACTGTGGTTTT GGTTATAACAACCTTGCCCTCAGAAACTTATAGAGCAAGCTTGTAGTTTAGGATTACTATCCTCTATAATTGACTAGAAGGTCTTATTTTTTAGGAACAG CACATTTGTTGCCATAGTTATAATAATTGTGTTAAAAACGTTTTGGAGGCTTGGAGGTTTTGCAATCTTTCATATCTTTTGTTTACTGTTGTTAATATGT GTCTCCTTCTAGGATGTAGTGATGTACTCCTGTGTTGGTTGTAGAGATCTAAAAAAATGGCAATAATTCTATGGACCTGCATGGTGCTTGGTATTTGTGT AGTATGTTTCAACTTAAATCTTCGATGGTGGATTCTATTGTGATATTGTCAGTCCTTTTATAAATTATATAGATAGGTGCTCAAGATGGTATTCTCTTGT GCCATTTCTGGAAGCTTTTGTCATTCTCAATTTCCAGTTTTTCCCTTAGTTTTATCATAAGCATATGCAGCTTCTATGCTGCAGGGATTGAAATGGATGA GGAGGAGCTCGCTCGCTTTGTAGAGCATGTCGATAAGGATAATAATGGGATCATTACCTTTGAAGAATGGAGAGATTT BLAST |
| Tissue | pods |
| Gene name | LI_gene_190258; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_430884
| Blastp | Calcium-binding mitochondrial carrier protein SCaMC-1 from Mus with 28.71% of identity |
|---|---|
| Blastx | Calcium-binding mitochondrial carrier protein SCaMC-1 from Mus with 28.71% of identity |
| Eggnog | Solute carrier family 25 (Mitochondrial carrier(ENOG410XQ4P) |
| Kegg | Link to kegg annotations (229731) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463607.1) |
| Pfam | EF-hand domain pair (PF13833.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |