Id Trinity | TRINITY_DN52124_c0_g1_i23 |
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Name Transcript | Ll_transcript_430892 |
Sequence | TGATCATGTCTTGTCACTCATGTGTATGAAATGTGGAGTGAGCAAAAGACAACTAAAAAATAATGTAGTAAAATATTTTTAACCTTTTTATAAAATTAAT TCATAATTTTATTATTGAAAAGAAAAATAAGTATTTGTGTCTAGCACAATCATATCGTGAATCTTTCCTATAAGATTGGATTTCAGAAGAATGAAACCAT ATAAATGAATGCATTGGCTATTTGTTCATTAAAAAGAAGAAAAAAATTGGAGCAAAAACATTGAAACTTTGTTACTAATTTGGCATTTCTCAATTTCAGG TGCATAACACAAACAATGTGTCTGGGCAGTAACAATAACAGCAACAACCCTGTTAAGAAAATGGTGCCATTGTCAATGGATGATGTCCTTCTAGCTTTAG GTGAAACCACTGAAGAGAGGGAACTTCGTATCCGGGGCCAATTCAATTTCTTCGATGTCGCAAAAAATGGGTACTTGGACTATGCTCAAATTGAAGCTGG CTTGTCTGCACTGCAAATACCCCCGGAGTACAAGTATGCCAAGGACCTCTTCAAGGTCTGTGATGCCGACAGCGATGGCAGGATCGATTACCTTGAGTTT CGCCGATACATGGATGATAAGGAATTGGAGCTTTACCAAATCTTTCAATCCATTGATGTTGAACAAGATGGCAGCATTCAAACTGAAGAGCTTTCAGATG CACTTGGCAGGGCTGGGATTGAAATGAGTGAGGGGGATCTTGCTCGTTTTGTGGAGCATGTTGATAAGGATAACAATGGAATTATCACTTTTGAAGAATG GAGAGATTTTCTTCTACTTTATCCTCATGAAGCAACTATTGAAAACATATATGAACATTGGGAGAGGGTGTGCCTTGTAGACATTGGAGAGCATGCTGTC ATTCCTGAAGGCATCAGCAAGCATGGAAACGCGATCAAATATTTCATCGCGGGGGGAATAGCAGGAGCTATTTCTCGTACCGCAACCGCTCCTCTTGATC GTCTGAAGGTGGTCTTGCAAGTTCAGACTACAAATGCTTCTATTATGCCAGCAATAATGAAGATAAGGCAGCAAGATGGTTTATTAGGATTTTTCCGGGG CAATGGATTGAATATTGTGAAAATAGCACCAGAAAGTGCCATAAAGTTCTATGCTTATGAAATGCTGAAAAAAGTACTTGGAGATGTTCAAGGCAATAAA TCTGACATTGGTCTTACCGGAAGGCTTTTCGCAGGTGGTATGGCCGGTGCAATTGCGCAGGCTTCTATCTTTCCACTTGAAGTTATTAAAACTAGGTTAC AGACTTGTGCTAATGAGGGTGGAACCGGTCCGAAGCTCATAACACTGACAAAGAGCATGTTAGTTCAAGAGGGACCTCGGGCATTCTACAGAGGGCTTGT TCCATCTCTTCTCGGCATGATTCCTTATGCAGGCATTGATCTCACTGCTTATGACACCTTGAAAGATATGTCAAAGAGATATCTTCTTGACAGCGAACCC GGTCCTCTAGTACAACTGGGATGTGGGACAATCTCAGGAGCTGTTGGAGCTACCTGTGTCTATCCACTGCAGGTTATTCGTACAAGACTGCAGGCACAGC CCTGCAACTCTTCTACTGCTTACAAGGGAATGTCTGATGTGTTTTGGAAAACTCTTAAGGATGAAGGCCTCAGAGGTTTCTACAAGGGACTTGTTCCAAA TCTCCTCAAAGTTGTGCCTGCTGCAAGCATTACTTATATGGTCTATGAAAGTATGAAGAAGAATCTAGATCTAGATTAGATTTCTTATAGTTTTTGCCTA GACAACTGAACTGATGTCAAATATTATAGGAAGTCTTTAATTGTTGATGATGATGAAAAAGAAAAGAGTTAACTAGTCCTTTAGGCATTATTGCAAATAG TCATTCTTCTGAGGATATCATCTTTACTCAGAAAGTTTTTCCCCATGTTTATCTACACTAAATGTTGAGGAAGTAGGGTTGTATTATATTATTCCTAGAT ATACCAAGGTATAGCTGTTACCCTCATGAATATGTGTACTGTGTGTGCTATATTCTAGAGTGAACAGTAAAAATTCTAACTTTTCTCCTCTCTATTTTCA TGCTATTATAAGCAGTACTATAGTACCACTAACATACAAATTGACGTGTGGATTTTGAGTGAATAATAGTGATGTATGGCATCCTTTTGTGGTTGAGGAA ACAAAGACAAAAATGTTTGGAATTCCTGTTGGGCGAATGAAGTAATATATGGCACTCTAAAACTGTGGGTTTTGTCTTCTCTGTTATTGTAAAGGTCAAA AAAATCTTGCTTGTTTAGCCATGTGGATTCCAAGAGTTGCTTGATTTTCATTTCTATAAGATTGCACTGTCTTGTGTTGTATTTGGGCAGAGAAATCTAT AATGAAATATCTATCTTTGATGAGTGAGAGAAAATATGTTAAGCT BLAST |
Tissue | pods |
Gene name | LI_gene_190258; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_430892
Blastp | Calcium-binding mitochondrial carrier protein SCaMC-2 from Silurana with 40% of identity |
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Blastx | Calcium-binding mitochondrial carrier protein SCaMC-2 from Silurana with 40% of identity |
Eggnog | Solute carrier family 25 (Mitochondrial carrier(ENOG410XQ4P) |
Kegg | Link to kegg annotations (496462) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019415324.1) |
Pfam | EF hand (PF13202.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |