Ll_transcript_430872

• Id Trinity: TRINITY_DN52124_c0_g1_i4
• Name Transcript: Ll_transcript_430872
• Sequence: CTTAAAATCAACTATTACCCTAAAAAAGATATATTTTTTAGTCTATTTGAAGCCTTATAACATAATAATAAGAAAGATGATGCTTTTAAACGCATGATAG CTAAATAGGAATATTCATTAATATCCCTTCTTCTCTAGATCTCAACCCTTTTACCACTATCAAAAGATTGAGGCATAGCATAAATATTCATCAAATTAAT TTTCCTTAATTTATCTCATTTTATCCTTATCACTCAATTACCTACCCAACCTTCAATCACAATCTCAGATTTTTTTGAGTGTATCTTTCCCCCTAATTAT TACGATTCTGTTTCATCTCTATTATATTTTATTATTTTTCATATTTTCAACACCAATTACGTGACTCAATTTCAGGTACCTTCTTCTCTTTCTTATTATT CATGTTCCTTTTTCACACAGCACTTTTTTCAATTCAATTCAATTGCTATTACCTTTCACTTGGTCTTTTATGATTTCCAGATCTGAACCCAAAGTTAGAA ACTTTCATTCAAATGATTCATTGGGTCAAAATCAAAATCAAATTTTGTTGTGATTTAAGAACCCAAGTTTCAAAATAACCAACATGTCTGGTGCTATAGA CATGGACCACGTTGGGTTTTCCAAATCCACGGCGGCTCCGGCCGCCGGCCACGGCAAGAAAACGGGTCCGGTTTCAATGGATCATGTGTTACTTGCGTTG CGCGAGACGAAAGAAGAGAGAGATATTCGAATTCGGAGTTTGTTCAATTTCTTTGATGCTGTCAACAATGGATACTTGGATTATGCTCAAATTGAAGCAG GGTTATCTGCACTGCAGATACCCCCTGAGTATAAGTATGCTAAAGAGTTGTTCAAGGTGTGTGATGGTGACAGGGATGGGAGGGTCGATTATGGCGATTT TCGGCGGTATATGGATGATAAGGAGTTGGAACTTTACCGGATTTTTCAAGCTATTGATGTCGAACACAATGGCTGCATTCTACCAGAAGAGCTTTGGGAT GCACTTGTTAAGGCTGGGATTGAAATGGATGAGGAGGAGCTTGCTCGCTTTGTAGAGCATGTTGATAAGGATAATAATGGGATCATCACTTTTGAAGAAT GGAGAGATTTTCTTCTACTTTATCCTCATGAAGCAACTATAGAGAATATATATCATCATTGGGAGAGGGTATGCCTCGTAGACATTGGAGAACAAGCTGT CATTCCCGAAGGCATCAGCAAGCATGTGCACAGGAGCAGATATTTTATTGCAGGGGGGATTGCTGGAGCTGCTTCTCGCACAGCAACTGCTCCTCTTGAT CGTCTCAAGGTGGTGTTACAAGTTCAGTCTGAGCGTGCTTTTATTATGCCAGCCATAATGAAGATATGGAAACAAGATGGTTTATTAGGGTTTTTCCGTG GCAATGGATTAAATGTTGTGAAGGTAGCACCGGAAAGTGCTATCAAGTTTTATGCTTATGAAATGCTGAAAAATGTAATTGGAGAGGCTCAAGGGAACAA GTCCGCAGATATTGGTACTGCTGGAAGACTAGTTGCAGGTGGTATGGCTGGTGCGGTTGCACAGATGGCTATATATCCTATGGATCTTATTAAAACTAGG TTACAGACTTGTGCTTCTGATGGCGGAAGGGTTCCGAAGCTAGGAAGACTTACAAAGGATATATGGGTTCATGAGGGACCACGGGCTTTCTACAGAGGGC TTGTTCCGTCTCTTCTCGGTATGATTCCTTATGCAGGCATTGATCTCACTGCTTATGACACCTTGAAAGATATGTCGAAGAGATATATTCTTGACAGAGA ACCCGGTCCTCTAGTACAACTGGGCTGTGGGACTATCTCAGGAGCGGTTGGAGCTACCTGTGTCTATCCACTGCAGGTTATCCGTACAAGATTGCAGGCA CAACCCTGCAACTCTTCAAATGCTTACAAGGGAATGTCTGATGTATTTTGGAAAACTCTTAAGGATGAAGGCTTCAGAGGTTTCTACAAGGGACTCATTC CAAATCTCCTCAAAGTTGTGCCTGCTGCAAGCATTACTTATATGGTCTATGAAAATATGAAGAAGAATCTAGATCTAGATTAGAGTTGTTGTAGTTTTTG TTTAGACAACTGAATTAATCTCAACTGTTATAGGAAGTCTTGAATTGTTGACGACGAAAAAGTGAAGAGATAACTAGTCGTGTAGGCATTATTGCAAATA GTCATTCTTCTGAGGATATCATAGAACATGATTTTGTAGTCAGATAGTTTTTCCCCATGCTTATCTGAACTAAATATTGAGGAAGTAGGATTGTATTATG CCTATATATGTACCAATATAATAGAGTGAAAAGTGAAGATACTTAATTCTCTATCTTCTAGTTTCATGCTATAAGAAATACCACTTACAGATAGG
• Tissue: pods
• Gene name: LI_gene_190258;
• Additional information: details;

Expression of Ll_transcript_430872

FPKM

• PAB: 9.1
• PNAB: 10.2
• PS1: 8.4
• PS2: 6.2
• PS3: 9.2
• PW1: 9.1
• PW2: 9.8
• PW3: 6.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_430872

• Blastp: Calcium-binding mitochondrial carrier protein SCaMC-1 from Mus with 38.23% of identity
• Blastx: Calcium-binding mitochondrial carrier protein SCaMC-1 from Homo with 38.36% of identity
• Eggnog: Solute carrier family 25 (Mitochondrial carrier(ENOG410XQ4P)
• Kegg: Link to kegg annotations (229731)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463022.1)
• Pfam: EF-hand domain pair (PF13499.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;