| Id Trinity | TRINITY_DN52126_c2_g1_i18 |
|---|---|
| Name Transcript | Ll_transcript_429882 |
| Sequence | ATTTATAAAAAAGCTAAAATAAAAGACACTTGTGTGTTATAACTTATAGTTATTAACTTATTTTCTTTACATGCAGTGAATCCATGGCTACCTCTTCGGT CCTCACCCATTAATGAATATAGACAAAGATCTTGAATTTGCTTTGTTCTGAAAATGGGTTCAAAAATTAAGCTTCTGGGTATGTGCATATGGCTATTTTA CTTGCCAAGTTTCACCTTCATTGTTGTGAATACACAAGATAATGAAAGTGGAAGAAGTGCAACTTTGAAGGGTAGTGTTGTCATTAATGGAAGATCTGTG ATTGGAAATATTGATGATGATTTTGTTTGTGCAACCCTTGATTGGTGGCCACCTCAGAAATGTGACTATGGGAGATGCAGTTGGGGTCTTGCTTCTCTTC TCAATTTGGTATTGTTGTTATTTTTCTTTTTATCCAAATTGTTTTTGATTCTTTTAAGGTTTTTTTTAAGAATGTTTAACTGCTGCAAATTTTTCTATGA CAACGTAAGTATAAGTAGTTTTTATTGTTTGTTAACTAGAAGTGATGTTTTTTCTATTTTCCTAATGCTTGCTTTGGATCTATTGGTACAGCTGCAAAAT AATTACTGTATAAAATTTAATCTTTTAATTTTATTGTTTTCTTAAAAATATATGTCATTATCTACTCATTGGTGAGGATCTGAGGCCAAGTTGATAATTT TATCACCACATAATGGTGAGATAATTGCATACTTTTTTTTTGCCTTTGGTAGATTATGTTTAACAAAAGGATAATTGAAATTAACTTTTGCTGAAATTTC AGGTTTCAATCTTTCATTTTCCTGTGTTCTTTAATGAATTAGGTTGAGTATATAAGTGAGAAGTCACATATTTGATATAAAGGAAAGAATGAAAGAGTTT ATAATTGACAAAGTCTATGAGACCATTACCTTAAGGTTTTTGTTTCAAGATATGGTGTCTCATTATAACTCTTTACTCTTTCCAATGCCCCGATGGGACT CTCGGTCGTTGGAGGTTCCCCAGTTGTGAATGGGCCGAACAAGTGGTATTAGAGCCGAGATGGCTCGACTGGGACATGGTGAACTCAAGGTGAAGTAAGT GTGTTGTGTGTGGTACCCACACTTGAGGTGGGAGATTGTTAGTTATATTCAAGTGTGAAGTCTCACATTGGATATGAGAAATAATTGGAAGAGTTTATAA GTCAAAAAGACACATGAAACTATTGTCTTAAGGTTTTTGGTTCAAGATGTGGTGTCCCACCTCTGGCTGACTCTTCACTCTTCTCATGCTCGATAACAAT GGAACCAACTGGTAGTTGGAGGCTCTTTTGTCGCAGTCGGGTCCAACAGATTAATTAATTGTTTTAATAATATATTGTACAGTTTGTAAAGGGAAGAGAG AACTCAAATCTTATAAATATTATCTCATGCAGGACCTCAACAACAAGATTTTGTTGAATGCAGTGAAAGGTAAGAGACAATGTTGCACCTCTACAATTGT CATTAGCAAGGTATGACTAATTGTCTTTGAATGTTTTGCAGCCTTTTCACCTTTGAAACTTAGATTAGGTGGAAGTTTGCAAGACAAGGTCATATATGAG ACAGAAAATGATCAACAACCATGTACTCCTTTTCATGCTGACACTTCTCAAATGTTTGGTTTCTCACAAGGGTGCCTCCCAATGAAAAGATGGGATGAGC TAAACAACTTTTTTGAAAAAGCAGGAGTTAAGATTGTCTTTGGATTAAATGCTCTTGTTGGAAGAACTGTATCTGGCTCTGCAGTTGGACCTTGGAACTA CACGAATGCAGAATCTTTTATTCGTTACACTGTCTCAAAGAACTATGCCATCGATGGATGGGAACTTGGCAATGAATTGAGCGGGAGTGGAGTTGGAACT AGTATTTCAGCAGACCAATATGCTTCTGATCTAACCGCTTTACGAAACATAGTTTACAATGCATATGAAGAGATTGATCTTAAGCCACTAATCATTGCAC CTGGAGGTTTCTTCTCTGCGGATTGGTTCAAGGAGTTTATAAGCAAATCCGGCACATCTTTGGATGTGGCCTCCCACCACATTTATAACCTTGGACCAGG AGTTGATGAGCACCTTGTGGAAAAAATTCTTAATCCTTCCTATCTTGATGGAGTGGCAAGCACATTTAGAGACCTAAAAAATGTACTTGAAAGTTCAGGA ACCGCAGCAACCGCATGGGTTGGTGAGTCAGGAGGGGCTTACAATAGTGGCCATCATCTTGTATCAGATGCATTTGTGTACAGTTTCTGGTTAGTGGTAA CTCCCTCCGATGTATATGCCGTAGTTTCGAGGGTTCCTTAAAACTATTACTAATGTTACTATATCACAAACAGGTATTTGGATCAGCTTGGTATGTCAGC TGCATATGATACTAAAACTTATTGCAGACAGAGCTTGATAGGAGGAAACTATTGTTTACTTAATACCACTAATTTCATGCCAAATCCGGATTATTATAGG TACCGAATATTGAATTTCATAGTTGCTTAGGTCATTCATTAGTTGGTAAAGTTGAAAAACAAATTTCCAAGCAAGACGTGCATTTTTCCGTCGGATAAAT TTGTTGTTTCCGTCGGATAAAGTTGAATGAAATGCTTTATTAGACGCCATTTCAAATAGATCCACAATGTTTCACGGCGAGGATTATAAAATCTGTGGTA ATGTGCTTTGTTTGCAGTGCTCTTCTTTGGCATAGACTCATGGGAAGACATGTACTATCAACTACCTTCTCTGGGACAAAGAAGATAAGAGCTTATGCAC ACTGTTCAAAGCAATCTGTGAGTAAAACTTGTGTCACTATGATTATGAAATGCATATTTATGTTGGAGATTAATTTAAATGTAGTTTTAGGTTAATGTTT TTTATACTATAACCAATCATACATCATACTTTCGAAGTAGTCATCGTGTAAGCCAAATATCGTTTTTTTTCCGTTATTGAATGACAGTGTAAAAATCTTT TACATTGCCGAATGCATGCAGAAAGGAATCACAATACTATTGATCAACCTGGACAGCAGCACGACCGTTGAAGCCGATGTGACCTTGAGCAGCACCAAGA ATTTCTTGCATAGAAAAATGTCTGATGATTCAAAGCTAGTGAAGCTACCTCTCCATTATGCAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_190272; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_429882
| Blastp | Heparanase-like protein 3 from Arabidopsis with 64.65% of identity |
|---|---|
| Blastx | Heparanase-like protein 3 from Arabidopsis with 57.7% of identity |
| Eggnog | Heparanase(ENOG410YDJW) |
| Kegg | Link to kegg annotations (AT5G34940) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019417502.1) |
| Pfam | Glycosyl hydrolase family 79, N-terminal domain (PF03662.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |