Id Trinity | TRINITY_DN52126_c2_g1_i3 |
---|---|
Name Transcript | Ll_transcript_429865 |
Sequence | ATTTATAAAAAAGCTAAAATAAAAGACACTTGTGTGTTATAACTTATAGTTATTAACTTATTTTCTTTACATGCAGTGAATCCATGGCTACCTCTTCGGT CCTCACCCATTAATGAATATAGACAAAGATCTTGAATTTGCTTTGTTCTGAAAATGGGTTCAAAAATTAAGCTTCTGGGTATGTGCATATGGCTATTTTA CTTGCCAAGTTTCACCTTCATTGTTGTGAATACACAAGATAATGAAAGTGGAAGAAGTGCAACTTTGAAGGGTAGTGTTGTCATTAATGGAAGATCTGTG ATTGGAAATATTGATGATGATTTTGTTTGTGCAACCCTTGATTGGTGGCCACCTCAGAAATGTGACTATGGGAGATGCAGTTGGGGTCTTGCTTCTCTTC TCAATTTGGTATTGTTGTTATTTTTCTTTTTATCCAAATTGTTTTTGATTCTTTTAAGGTTTTTTTTAAGAATGTTTAACTGCTGCAAATTTTTCTATGA CAACGTAAGTATAAGTAGTTTTTATTGTTTGTTAACTAGAAGTGATGTTTTTTCTATTTTCCTAATGCTTGCTTTGGATCTATTGGTACAGCTGCAAAAT AATTACTGTATAAAATTTAATCTTTTAATTTTATTGTTTTCTTAAAAATATATGTCATTATCTACTCATTGGTGAGGATCTGAGGCCAAGTTGATAATTT TATCACCACATAATGGTGAGATAATTGCATACTTTTTTTTTGCCTTTGGTAGATTATGTTTAACAAAAGGATAATTGAAATTAACTTTTGCTGAAATTTC ACATATTTGATATAAAGGAAAGAATGAAAGAGTTTATAATTGACAAAGTCTATGAGACCATTACCTTAAGGTTTTTGTTTCAAGATATGGTGTCTCATTA TAACTCTTTACTCTTTCCAATGCCCCGATGGGACTCTCGGTCGTTGGAGGTTCCCCAGTTGTGAATGGGCCGAACAAGTGGTATTAGAGCCGAGATGGCT CGACTGGGACATGGTGAACTCAAGGTGAAGTAAGTGTGTTGTGTGTGGTACCCACACTTGAGGTGGGAGATTGTTAGTTATATTCAAGTGTGAAGTCTCA CATTGGATATGAGAAATAATTGGAAGAGTTTATAAGTCAAAAAGACACATGAAACTATTGTCTTAAGGTTTTTGGTTCAAGATGTGGTGTCCCACCTCTG GCTGACTCTTCACTCTTCTCATGCTCGATAACAATGGAACCAACTGGTAGTTGGAGGCTCTTTTGTCGCAGTCGGGTCCAACAGATTAATTAATTGTTTT AATAATATATTGTACAGTTTGTAAAGGGAAGAGAGAACTCAAATCTTATAAATATTATCTCATGCAGGACCTCAACAACAAGATTTTGTTGAATGCAGTG AAAGGTAAGAGACAATGTTGCACCTCTACAATTGTCATTAGCAAGGTATGACTAATTGTCTTTGAATGTTTTGCAGCCTTTTCACCTTTGAAACTTAGAT TAGGTGGAAGTTTGCAAGACAAGGTCATATATGAGACAGAAAATGATCAACAACCATGTACTCCTTTTCATGCTGACACTTCTCAAATGTTTGGTTTCTC ACAAGGGTGCCTCCCAATGAAAAGATGGGATGAGCTAAACAACTTTTTTGAAAAAGCAGGAGTTAAGATTGTCTTTGGATTAAATGCTCTTGTTGGAAGA ACTGTATCTGGCTCTGCAGTTGGACCTTGGAACTACACGAATGCAGAATCTTTTATTCGTTACACTGTCTCAAAGAACTATGCCATCGATGGATGGGAAC TTGGCAATGAATTGAGCGGGAGTGGAGTTGGAACTAGTATTTCAGCAGACCAATATGCTTCTGATCTAACCGCTTTACGAAACATAGTTTACAATGCATA TGAAGAGATTGATCTTAAGCCACTAATCATTGCACCTGGAGGTTTCTTCTCTGCGGATTGGTTCAAGGAGTTTATAAGCAAATCCGGCACATCTTTGGAT GTGGCCTCCCACCACATTTATAACCTTGGACCAGGAGTTGATGAGCACCTTGTGGAAAAAATTCTTAATCCTTCCTATCTTGATGGAGTGGCAAGCACAT TTAGAGACCTAAAAAATGTACTTGAAAGTTCAGGAACCGCAGCAACCGCATGGGTTGGTGAGTCAGGAGGGGCTTACAATAGTGGCCATCATCTTGTATC AGATGCATTTGTGTACAGTTTCTGGTTAGTGGTAACTCCCTCCGATGTATATGCCGTAGTTTCGAGGGTTCCTTAAAACTATTACTAATGTTACTATATC ACAAACAGGTATTTGGATCAGCTTGGTATGTCAGCTGCATATGATACTAAAACTTATTGCAGACAGAGCTTGATAGGAGGAAACTATTGTTTACTTAATA CCACTAATTTCATGCCAAATCCGGATTATTATAGGTACCGAATATTGAATTTCATAGTTGCTTAGGTCATTCATTAGTTGGTAAAGTTGAAAAACAAATT TCCAAGCAAGACGTGCATTTTTCCGTCGGATAAATTTGTTGTTTCCGTCGGATAAAGTTGAATGAAATGCTTTATTAGACGCCATTTCAAATAGATCCAC AATGTTTCACGGCGAGGATTATAAAATCTGTGGTAATGTGCTTTGTTTGCAGTGCTCTTCTTTGGCATAGACTCATGGGAAGACATGTACTATCAACTAC CTTCTCTGGGACAAAGAAGATAAGAGCTTATGCACACTGTTCAAAGCAATCTGTGAGTAAAACTTGTGTCACTATGATTATGAAATGCATATTTATGTTG GAGATTAATTTAAATGTAGTTTTAGGTTAATGTTTTTTATACTATAACCAATCATACATCATACTTTCGAAGTAGTCATCGTGTAAGCCAAATATCGTTT TTTTTCCGTTATTGAATGACAGTGTAAAAATCTTTTACATTGCCGAATGCATGCAGAAAGGAATCACAATACTATTGATCAACCTGGACAGCAGCACGAC CGTTGAAGCCGATGTGACCTTGAGCAGCACCAAGAATTTCTTGCATAGAAAAATGTCTGATGATTCAAAGCTAGTGAAGCTACCTCTCCATTATGCAA BLAST |
Tissue | pods |
Gene name | LI_gene_190272; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_429865
Blastp | Heparanase-like protein 3 from Arabidopsis with 64.65% of identity |
---|---|
Blastx | Heparanase-like protein 3 from Arabidopsis with 57.7% of identity |
Eggnog | Heparanase(ENOG410YDJW) |
Kegg | Link to kegg annotations (AT5G34940) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019417502.1) |
Pfam | Glycosyl hydrolase family 79, N-terminal domain (PF03662.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |