| Id Trinity | TRINITY_DN52132_c3_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_430559 |
| Sequence | CTTTATGCCCTTTAACTCATTTTGTGTGGACTTTTTTAATATATTTTGTGTCTCTATTTCTGTTTTATACATTGAGTACTGGTCTCTGCAGGATGACCAG TATTCATCCCTTGAGAAGGAAACTGATTTTAGAATGTTGTTTCTTCTTCCATGTTCTCTGGTCTGATCTTTTTGCTGTTCAAAGAAATTTCTGACCATCT TTTGTTTATTCCTTGAAGGGAATGCTCTAGATGATTTTCTCCCCTTTTCTGCAAAGGAGTCCGAGAAGGAGGTGAAAACTTGGAACAAGTTTGTTACAAT TGCAGCCCCTAGGTCTCATGGGAAAGAGGGTGTTTCCACTCACTATCAAAATGATGGCTCTCCCCTGTACCTATTAACACCTAATATTTTGCCTCCTTCT GCAGTTAGTGTGCATAGATGGCTAGATGAGAGAGATCAAATGCTTAAAGAAACTGATTCGGAGGACAAGTATGTACCTGAATGTGCTTCTGGGCCTCCTC TTGGGCCTATGCTGTATCAAGATGCTGGTGCAGAAAAGAAATCTCCACACGGTCATGGGGGACAAACAGAAAGAGTGAAGGCATGCCTAGATGGCTCAGA AGATATTTCTCAGATATCAGGCCCTAGTAGGAAATCAAGTTTTACCCCTCTAAGTCAAATTGGATTTCGAGACCCTGCCAGTGCTGGATGTGGACAACAA TTGACATTACTTAGTATAGAGGTTCTTGCAGAATCAAGAGGAGAATTTTTACCAGATCCTCAGTTTGATGCCATCAACATTGTAGCTCTAGGTTTTCAGA ATGATAATGAGCCTACTGTTGAAGTTCTTGTTCTTTTGCGTAGTAAACTTGAACCTTGTCATAGACATTTTGATGGCTTATCAGGCTGCAAAGTATTGGT CTTCACTGATGAAAAGCACTTGTTAAAAGAATTTATCAAGTTCATCTCTTCATCTGACCCAGATATTTTGATGGGTTGGGATATTCAAGGAGGTTCTCTT GGTTTTCTAGCGGAAAGGGCTTCACATCTTGGTCTAGGATTACTTAATAGTTTGTCTCGCACTCCTTGTCAGTCTTGGGTTGCTTCTGAGGATACCAAAA CTTCTGGAATAGCTATCTTGGAACTGGACATTCCTGATAGCCCTACTTTAGATTCTTGTGTACAAGAAAATTCAATAATTGAGGATGAATGGGGACGAAC ACATGCAAGTGGAGTTCATGTAGGTGGCAGAATTGTCCTTAATGTATGGCGATTGATCCGTGGAGAAGTTAAGTTGAATTTATATTCAGTTGAAGCTGTA GCTGAAGCTGTACTGAGGCGGAAAATCCCTTTAATTCACCACAAGGTGCTGACAAAATGGTTTTCTAGTGGCCCTGGACAAGCCAGATATCAGTGTATCA AGTATGTTACAGAGAGATCAAAGCTGAACCTTGAGATATTAAACCAACTTGATATGGTGAATCGGACATCAGAACTTGCTCGTGTCTTTGGTATAGACTT CTTTTCTGTTCTCTCTCGAGGCTCACAATACCGTGTTGAATCCATGTTTTTGAGGTTGGCTCATACACAGAATTATCTTGCTATCTCACCTGGAAAGCAA CAGGTTGCTTCTCAACCTGCCATGGAGTGCCTGCCTCTAGTAATGGAACCAAAATCAGGATATTATTCAGATCCTGTGGTTGTATTGGACTTCCAGTCTC TTTATCCATCCATGATAATTGCATACAACCTTTGCTTTTGCACATGTCTTGGTAAAGTTGTGGCATCAAAGGCTAACACGCTTGGGGTTAGTTCATTTTC ACCGGAGCAACATGTTCTACAGAATTTGAAAGATCAAATCTTGCTCACCCCAAATGGTGTTATGTTTGTACCATCCAAGATTCGCAGAGGTGTGTTGCCC CACTTATTGGAAGAAATATTGTCAACTAGAATAATGGTGAAACAGGCAATAAAAAAATTGGCTCCTTCGGAGCAAGTTCTTCAGCGGATATTTAATGCGA GACAACTTGCTTTGAAGCTCATATCAAATGTAACATATGGTTACACTGCTGCTGGATTTACTGGTCGCATGCCTTGTGCAGAACTTGCTGACAGTATTGT TCAATGTGGCCGTAGTACACTGGAAAAGGCTATATCATTTGTAAATCTGCACGAAAAGTGGAATGCTAAAGTTATTTATGGAGACACTGATAGGTATAGA TGTGCAAAATCTCTAATTACAGTGAAGTATACAAACCTCTCCTGAGATTTACCTGAATTACATCCAATACTTCTTTTATTTCACAAAGTACACCGACTTT CTGTATTTTCAGCTTTTCACCTATATCGAAGGCCTGCATATAGGCTATTTGTGCCTGGAAAAAGTTTTGCTGTGGTACTTGTCTTAGAAAGTAAAAAAAT GGGAGGTAACTGTAACTTAAGGCAAACCCTGGGCCTAGCGGAGGTTGATGTAACTATACCCG BLAST |
| Tissue | pods |
| Gene name | LI_gene_190340; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_430559
| Blastp | DNA polymerase zeta catalytic subunit from Arabidopsis with 70.36% of identity |
|---|---|
| Blastx | DNA polymerase zeta catalytic subunit from Arabidopsis with 58.4% of identity |
| Eggnog | DNA polymerase(COG0417) |
| Kegg | Link to kegg annotations (AT1G67500) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419410.1) |
| Pfam | DNA polymerase family B, exonuclease domain (PF03104.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |