Id Trinity | TRINITY_DN52140_c0_g1_i2 |
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Name Transcript | Ll_transcript_431785 |
Sequence | CTGAAAGTGTACGAGGGACTATACTGCATGTCAACTAGAAATTTCAAGAAGGCTGCTGATCTGTTCTTGGATTCTATTTCTACCTTTACAACCTATGAGC TTTTCCCCTATGATACATTTATATTTTACACGGTTTTGACAAGCATTATATCTTTGGATAGAGTTTCTTTGAAGCAAAAGGTTTTTTTATCGAGCATTTG TTTCTCTATTTTATCATTTCCCTTTCTGTTTCTTTCAACGTGTTTTGCTTATTATGTTATTAATTTTAGTTGCCTGCATCAGGTAGTGGATGCTCCTGAG ATTTTAACAGTTATTGGCAAAATCCCATATCTTTCAGAGTTTTTAAACTCTTTATATGATTGTCAATACAAGTCTTTTTTCACAGCATTTGGTGAGCAGA GATAGTAATATTTTTATGTTATATATTGATTTTCTTTAACTCATCTGATGTAGAAAAGGGTATGAGGGAAATGCTGGCAAATAGCTAATCTCTATGTATT TGAATCCAGAATGATAGTCTTGTTTCATTAAATGTATTTCAGCTGGCTTGACGGAGCAAATTAAGTTGGACCGCTATTTGCATCCGCATTTCCGGTATTA CATGAGGGAGGTCCGGACTGTTGTTTATTCCCAGTTTTTGGAATCATATAAGAGTGTTACAATTGAGGCTATGGCAAAAGCCTTTGGAGTGACAGTGGAT TTCATTGATGTGGAGTTATCACGTTTTATTGCAGCTGGAAAACTTCATTGCAAGATTGACAAAGTTGCAGGTGTTCTGGAAACTAACCGGCCTGACGCAA AGAATGCTCTTTACCAAGCAACTATTAAGCAAGGAGACTTCCTACTGAACCGGATCCAGAAACTATCACGGGTGATTGATCTTTGAAGTTATCTCTATGA TTCTAAATTTTACCTTTTTTCCATGGGAAAGGCATTTCTATAAAGGGAAATTTTGAAGGGTTTCCCATTGAATGCATGGGTGGTTGTGACATTTCTGTAG TCTATTTGATCTCCAAATTAAGGAACACTCAAGGTTGCTGAATCCAACATGTCTCAATTCAGTTTTCCATTATTTTAGAACAGATTATATAGTTAGTTTT TTGTTGACAATGTACTTGTTTTTAGATGCTAGCATGTAGGATATTCCATGATATTGTGTGACTACCAGTTTGTGTGTGTTTGCCCCCTTCTAAAATATAT TTATATATTGCACATGCTCACTAGGC BLAST |
Tissue | pods |
Gene name | LI_gene_190392; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_431785
Blastp | 26S proteasome non-ATPase regulatory subunit 6 homolog from Arabidopsis with 66.41% of identity |
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Blastx | 26S proteasome non-ATPase regulatory subunit 6 from Oryza sativa with 92.98% of identity |
Eggnog | Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 6(COG5187) |
Kegg | Link to kegg annotations (AT4G24820) |
CantataDB | Link to cantataDB annotations (CNT0000653) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (NP_001242671.1) |
Pfam | 26S proteasome subunit RPN7 (PF10602.8) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |