Ll_transcript_431796

• Id Trinity: TRINITY_DN52140_c0_g1_i8
• Name Transcript: Ll_transcript_431796
• Sequence: CTGAAAGTGTACGAGGGACTATACTGCATGTCAACTAGAAATTTCAAGAAGGCTGCTGATCTGTTCTTGGATTCTATTTCTACCTTTACAACCTATGAGC TTTTCCCCTATGATACATTTATATTTTACACGGTTTTGACAAGCATTATATCTTTGGATAGAGTTTCTTTGAAGCAAAAGGTAGTGGATGCTCCTGAGAT CTTAACAGTTATTGGCAAAGTCCCATATCTTTCAGAGTTTTTAAACTCTTTATATGATTGTCAATACAAGTCTTTTTTCACAGCATTTGGTGAGCAGAGA TAGTAATATTTTTATGTTATATATTGATTTTCTTTAACTCATTTGATGTAGAAAAGGGTATGAGCGAAATGCTGGGAAATAGCTAATCTCTATGTATTTG AATCCAGAATGATAGTCTTGTTTCATTAAATGTATTTCAGCTGGCTTGACGGAGCAAATTAAGTTGGACCGCTATTTGCATCCGCATTTCCGGTATTACA TGAGGGAGGTCCGGACTGTTGTTTATTCCCAGTTTTTGGAATCATATAAGAGTGTTACAATTGAGGCTATGGCAAAAGCCTTTGGAGTAACAGTGGGTTT CATTGATGTGGAGCTATCACGTTTTATCGCAGCTGGGAAACTTCATTGCAAGATCGACAAAGTTGCCGGTGTTCTGGAAACTAACCGCCCCGATGCTAAG AATGCTCTTTACCAAGCTACTATTAAGCAAGGAGACTTCCTACTAAACCGGATCCAGAAATTATCACGAGTGATTGACCTTTGAAGTCATCTCTTATGAT CCTAAATGTTACCTTTTCCCATTGGGAAAACACAGGGGATAAGGAGAATTTGAAGGGTTTCATGTTGAATGCATTGTATTTGGTGGATATGGCATTTCTA TAGTCTATTTGATTTCCAAATTAAGGAACTCTCAAGCTTGGTGAATCCAAGATGTGTCAATTCAATTTCTAACTAGTTTAAAACAGATTAGATAACTAGT ATTTTTTGTTTGACAATATACTTGTGTTTAAATCAGTGTTATTAAACTCGGACCGGTCATCGACTCGGTCACACTATTGGGTCAATGGGTCACTGGTCGA ACCAGTGAGTCATTGGTTGAACCGGTTAACTCGGTTTTCATCATATATTCATAATAATATCAATAACAAACATTATTTTGTAGAAAGGTCTTTCAAACTA TCACACAAGTAACTTCGTTATGTATGTAATTTTAATATATTACTTTTATTTAGTTAATGCAATATTAGTTCAGGAGGTTTACAATTTGCTTTTTTCTTTC AAAAACC
• Tissue: pods
• Gene name: LI_gene_190392;
• Additional information: details;

Expression of Ll_transcript_431796

FPKM

• PAB: 0.7
• PNAB: 0.5
• PS1: 0.3
• PS2: 0.4
• PS3: 0.2
• PW1: 0.1
• PW2: 0
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_431796

• Blastp: 26S proteasome non-ATPase regulatory subunit 6 from Oryza sativa with 91.67% of identity
• Blastx: 26S proteasome non-ATPase regulatory subunit 6 from Oryza sativa with 92.11% of identity
• Eggnog: Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 6(COG5187)
• Kegg: Link to kegg annotations (4336206)
• CantataDB: Link to cantataDB annotations (CNT0000653)
• Mirbase: lja-MIR7524 (MI0024399)
• Ncbi protein: Link to NCBI protein (NP_001242671.1)
• Pfam: 26S proteasome subunit RPN7 (PF10602.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;