Ll_transcript_431904

• Id Trinity: TRINITY_DN52142_c0_g2_i1
• Name Transcript: Ll_transcript_431904
• Sequence: CGTTTCTTCTCCAAAAATCATCTCTTTCTCTCTCTACTTTCTCTCTCTACTTTCTACTTTCACTCCCAAAAATTCACTTCATTTCAATTTCAATTGGGTT TTTCTGGAATTGGGTTTTTCTTTATCCGATTTGAGGATCAATTCTCTCGATTCTTTAGGGAATTGATCGGGTTTTGTTGAATCTATTTATCTGATTCATG CGATGCTATTAGTTCTGAGATGAAGTTGAAGAGAAAGAGGGCACTTGAAGTGCCTCCAAAAATTAAAAGCTTCATCAGCAATGTTACTTCAGTTCCTCTT GAGAAGATAGAAGAACCTTTAAAAGACTTTGTTTGGGAGTTCGATAAGGGAGATTTTCATCACTGGGTTGATCTTTTTAACCATTTTGATTCATTCTTTG AGAAGTTTATAAAATCAAGGAAGGATCTACAGATTGATGATGATTTTCTGCGCTCGGATCCTCCCTTCCCTGGACAGGCTGTACTTCAGATTCTTCGTGT CATTAGAATAATTTTGGATAATTGCACAAATAAACATTTCTATAGTTCCTTTGAGCAGCATCTCTCGGCATTGCTTGCTTCTACTGATCCAGATGTGGTT GAGGCCAGCCTGGATACTCTTGCGACCTTTTTGAAGAGAACAGTTGGGAAGTACTCCATAAGAGACACGTCTTTGAATTCAAAATTGTTTGCACTTGCAC AAGGATGGGGTGGAAAGGAAGAGGGACTTGGATTAATTGCATCAGCTGTGCCTAATGGCTGCGATTCTCTTGCTTATGAGTTGGGTTGTACCCTTCATTT TGAGTTTTATGCAGCAAATGACTCAGAAAGTGACATCAAAGTGGCTGAACCCTTGGTACAAGGGTTACAAATTATTCACTTATGCAACACTAACAAATGT GTGGAAACTGATCTTGAGATTTTGCACAAGTTAGTTACAAAATATAAGGTACCTGCCAGTTTCAGATTTTCTTTATTGACAAGATTGCGGTTTGCTAGGG CTTTTGGTTCTTTGGCTTCTAGACAGCAGTACACATGCATTCGTCTGTATGCTTTCATAATTCTGATTCAAGCATGTGCTGATGCTGATGACCTGGTTTC GTTTCTTAATGCTGAGCCTGGTTTTCTCAATGAATTAGTGTCATTACTGAGCTATGAAGATGCAGTCATGGAAAAAATCCGGATTTTATGCTTGCATTCA TTAGCTGCTCTTTGCCAAGATCGATCCCGTCAATCTTCAGTACTGACTGCGGTTACATCTGGTGGGCACCGTGGCATTTTATCTAGCCTGATGCAAAAAG CCATTGACTCCGTTGTTAGTGGTGACACCTCAAGATGGTCTGTTCATTTTGCAGAAGCTCTATTATCTCTTGTCACCGTGTTGGTTTCATCATCATCTTC TGGGTGCTCTGCCATGCGTGAAGCAGGATTTATTCCTACTCTGCTACCTCTCCTTAAAGATATAAATCCACAACATTTGCATCTGGTTGAAAAAGCAGTG CGTATTTTGGAAGCTTTTATGGATTACAGTAATCAAGCTGCTGCATTGTTCAGAGATTTGGGAGGTTTAGATGATACTATCTCTCGCCTAAAGATTGAGG TCTCCCATGTAGAAACTGGTGGAAAGCAGCCAGATGAAAATTCTGAGTCTAGTGCCAGGAGTGCACATATGAAAGAAGGTTCTTCAACTAGCCAAGATGA CATGCAACCTTTGTATTCTGAGCCATTAATTGCATATCATCGGCGGTTGCTGATGAAAGCTTTATTGCGTGCTATATCCCTGGGAACTTATGCCCCTGGA AATACTACTCGTATCTATGGATCTGAAGAGAATGTGCTGCCTCATTGCTTATGTATAATTTTCAGAAGAGCCAATGAATTTGGTGGTGGAATTTTTTCAC TCGCAGCTACTGTCATGAGTGACTTAATACAAAAGGATCCTACATGTTTTCCTGTCTTAGATACAGCTGGTCTTCCATCTGCCTTCTTGGATGCTATAAT GGATGATGTTCTGAACTCTGCAGAAGCCATTACATGCATCCCCCAGTGTTTGGATGCCTTATGCCTGAATAGTAATGGTCTCCAGGCTGTGAAAGATAAG AATTCTTTGAGGTGTTTTGTGAAAGTGTTTACTTCTAGAACATATTTGCGTGCTCTTACTGGTGACACACCTGCATCTTTGTCTAGTGGATTGGATGAAT TGATGCGACATGCTTCTTCATTACGTGGGCCTGGAGTGGATATGTTGGTTGAGATTCTGGAAACTATCTCAAAAATCGGGTCTGGAATCGATTTGTCGTC CTCGTGTTCTGATCCTTGCTCTTCAACCTCTGTTCCAATGGAAATGGATGGCGAGAACAAAAATTTGATGTTGCCTGATAATAGGGAATCTTCCAAGACA GATAATACAAAGCAGATTACTGAGCCTTCTCCTGATGCTTCAATAATGAATATTGAATCATTTCTTCCAGATTGTGTTAACAATGTTGCTCGTTTACTTG AGACAATTCTCCAGAACGCTGATACGTGTCGAATATTTGTTGAGAAAAAGGGGATTGAAGCTGTTCTCCAGTTATTCACCTTGCCGTTGATGCCTCCTTT TGCTTTTCTTGGGCAGAACATATTTGCTGCCTTCAAAAACTTCTCCCCCCAGCACAACGTTTCTCTTGCTCGCACTGTATGTTCCTTCTTGAGGGAACAT CTGAAATCAACCAATGAGCTTTTAGATTCGGTGGGAGGAACTCAGCTTGCTGTAGTTGAATCTGCAAAGCAGACAAAAGTGTTGAAATATCTTTCTAGCC TTGAAGGTCTTCTAACTCTTTCTGCATCTTTGTTAAAAGGAACGGCAACTACCGTGGTCTCTGAACTAAGCACTTCAGATGCTGATGTTTTGAAAGATCT TGGGAGAACCTACAAAGAAATAATGTGGCAAATATCTTTGTGTAATGATTCCAAGGCAGAGGAAAAGAACACTGATCAAGAACCTGGAATTTCACAGGTA CCCCCATCTGCTGCTGTTGAAAGAGAGAATGACGATGATGCAAATGTTCAGACAGTGAGATACACAAATCCAGTTTTTGCTAGGCATGGTTCGCATTCCC TGTGGAGTGGAGAACGTGACTTTGTTTCTGTAGTTCGTTCTGGAGAAAGTTTGCACCGCCGTAATCGGCATGGATTATCCCGCCTAAGAGGTGGAAGGAC TGGTCGTCACGTGGAAGCTTTAAACATTGATTCTGAGGCAGCTTCAAGTTTGGTGGAGGCACCTTCATCCCAAAATCTGAAAAAGAAAAGCCCTGATGTT CTTGCCTCGGAGATTCTTAACAAGCTGGCTTCAACTTTGCGCTCTTTCTTCACTGCTCTTGTAAAGGGATTCACCTCACCGAATCGTCGTAGAGCTGACC CTGGGCCACTAAGCTCAGCTTCAAAGATTCTCGGAACTGCCTTAGCTACAAATTTTTTAGAGGCTCTTAGTTTTTCTGGGCACTTTACTTATGCTGAACT TGAGATGTCGCTTTCTGTAAAATGTAGATATCTTGGAAAAGTTGTGGATGATATGGCAGCTCTCACATTTGACAGCAGGCGCCGGAGTTGTTATACTGTC ATGGTTAATAATTTTTATGTCCATGGGACATTTAAAGAGCTACTTACAACATTTGAAGCTACTAGTCAGTTGCTATGGACACTTCCATGTTCTTTTCCAT CCTCAGATATTGATATTGGAAAGAAAGGGGATGGGAGTAAATTGTCCCATAACATTTGGCTACTTGATACATTACAAAGCTACTGTCGTTTGCTCACGTA TTTTGTAAACTCTTCTATACTTTTGTCCGCAACCTCAGCATCTCAGGCAGAACTTCTTGCTCAGCCAGTTGCAGTTGGCCTGTCAATCGGACTCTTTCCG GTTCCTAGAGATCCAGATGCATTTGTTAAAATGTTGCAATCCCAGGTTCTGGATGTGATCCTACCAGTCTGGAATCATCCAATGTTTTCTAATTGCAGTC CTGGTTTCATTTCCTCTATTATTTCACTTGTTACACATGTATACTCTGGCGTTGGAGATGTCAAGCGGAATCATAGTAATATTGTGGGAATCACAAACCA ACGTTTCATGCCCCCACCACCTGATGAGACAACTATTGGCACAATTGTTGAAATGGGATTTTCTAGGGCACGGGCTGAGGAAGCACTGAGAAGAGTTGAA ACAAATAGTGTTGAAATGGCCATGGAGTGGCTGTTTAGTCATGCTGATGATCCTGTACAGGAGGATGATGAACTTGCAAGGGCACTTGCTCTGTCCCTAG GAAATAGTTCTGAAACTAGTAAAGTGGATGGTGCTGAGAAGACTATAGGTGTGCTAACTGAAGAGGGACATGTGAAGAAACCTCCAATTGATGATATACT TGCTGCTTCTGTAAAGCTGTTCCAGGGGAGTGATTCTGTGGCATTTCAGTTAACAGATTTGCTTGTAACACTTTGCAGTCAGAACAAAGGTGAAGATCGC CCAAAAATAATATCTTATCTTCTGCAACAGCTAAAACTTTGTCCATTGGATTTTTCGAAGGATAACTGTGCATTGAGTGTGTTAGCACATATTATAGCAC TGCTTCTTTTTGAGGATGGAACTACACGTGAAATTGCTGCTGAGAATGGCATCATATCTACTGCCATAGATATCTTGACAGACTTCAAAGGCAAACATGA GTCAGGGAAAGAACTACTGGCACCTAAATGCATTAGTGTTTTACTACTTATATTGGACCAGATGCTGCAGTCAAGACCAAAAACTGAGAATACAGATGGA ACCCAAACTGGTTCTGTGCCTGAGTCATCTGGGGATCATGGTTCCCTTCAATTTGCAGGTGTGATTGTGCAGAAGGAAAAAAAATTAGATGTAAATGTGA AAGAACCTGGTGCTGCTTTAGATAACATACTGGGGAGCTCTACTGGTTTTGCATCTATTGATGAGAGTCTTAAGTTGCTGAATATTGTTTGTGATTTGAT AAAACAACATGTCCCGGCTGTGGTCATGCAGGCTGTTTTGCAGTTATGTGCCCGATTAACAAAAACACATGCTTTGGCTTTACAGTTCCTTGAAAATGGA GGGCTGACTGCTCTTTTTAGTCTTCCAAAGAATTGTTTTTTTCCTGGGTATGATACTGTTGTATCAGCTATTGTTCGACATCTCCTTGAAGATCCTCAAA CACTACAAACTGCCATGGAATTAGAGATACGACAAACTTTAAGTGGAAATCGCCATTCTGGACGTGTCTCTCCCCGATCATTTTTGACATCATTAGCCCC TGTTATCTCTAGGGATCCAGTGGTTTTCATGAAAGCTGCAACAACAGTTTGTCAGTTAGAGACATCAGGGGGAAGGACAATAGTTGTTTTATCGAAGGAA AAAGAAAAGGAAAAATCTAAAGCATCGAGTACTGAGGCTGGGTTATCCTCTAATGAATGTGTCCGAATACCTGAAAGCAAGTCACATGATGGATCAGCTA AATGTTTGAAAAGCCACAAAAAGGTTCCTGTTAATCTCACTCAAGTAATTGATCAGCTTCTTGAGATTGTGCTAAAGTACCCGCCTATGAATGGGCAGGA AGACTCTGAGTGTGGCTCAACTTTCATGGATATAGATGAACCTGCTATGAAGGTTAAGGGTAAATCAAAGGTTGAAGAGGTGGGAGTGTTAGAGACTGAA TCTGAAAGGTCTACTGGATTGGTGAAGGTAACTTTTGTTCTCAAGTTATTAAGTGACATTCTTCTAATGTATGGGCATGCAGTGGGTGTCATACTCAGAC GTGATTCTGAAATGGGTCAATTCCGTGGATCCAATCAACCATCTGGACATAGTGGTATTATCCATCATGTATTACATCGGTTGCTGCCCCTCTCTGTTGA CAAGTCTGCAGGACCTGATGATTGGAGAAGTAAGTTGTCTGATAAGGCTTCATGGTTCCTGGTAGTTTTGTGTGGTCGGTCTAGTGAAGGGCGTAAGCGA GTGACAAATGAACTTGTTAAAGTATTGATGTCCTTTTCAAACTTGGAGAGCAATTCAACGAAAAATAGTTTACTGCCAGATAAAAGGCTTTTTACTTTTA TTGACTTAGTATACTCTATTTTGTCAAAAAATTCATCAGCTGGTAGCCTACCGGGTTCTGGATATTCGCCTGACATTGCGAAAAGCATGATAGATGGTGG AATCATTCAGTGTTTAACTAGTATCCTGCAAGTGGTTGATCTGGATCATCCCGATGCACCCAAGATTGTGAATCTTATACTAAAAGGTTTAGAAGGTCTT ACAAGAGCTGCTAATGCTAGTGAGCATATCATTAAATCTGATGGGATTGAAAAGAGAAGATCTGCTGGTTCAAATGATAGACCTGATGATCAAATAAGAA CTTCATCTGCAGCTGAAACAGTAAGAGATGATCAGAATGCAAGCAGTCAAGAGGCACATGGATATACAATGGATAATGCACATGATCAAGGGACTTCTCA AGGTAATCATCACACTGATAATCCAAATCAAACAGTGCAGGGTATGAGAGTTGAAGGGGAGACTCAAAACCCGTCAATGGAACTCGGAGTGGACTTTATG CCTGAAGAGATTGGAGAGGGTGCTGTCTTGCATAACCCAGATCAAATTGAGATGACTTTTCATGTTGAGAATAGGGCAGATGATGACATGGGTGATGAAG ATGATGATATGGGTGATGATGGTGATGATGATGAAGATGATGAAGATGGAGAGGATGAAGAAGAGGATATAGCAGAAGATGGTGGGGGTATGATGTCTTT
• Tissue: pods
• Gene name: LI_gene_190407;
• Additional information: details;

Expression of Ll_transcript_431904

FPKM

• PAB: 0.5
• PNAB: 8.3
• PS1: 14.1
• PS2: 8.2
• PS3: 10.3
• PW1: 6.7
• PW2: 8
• PW3: 7.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_431904

• Blastp: E3 ubiquitin-protein ligase UPL1 from Arabidopsis with 62.44% of identity
• Blastx: E3 ubiquitin-protein ligase UPL1 from Arabidopsis with 62.21% of identity
• Eggnog: ubiquitin protein ligase(COG5021)
• Kegg: Link to kegg annotations (AT1G55860)
• CantataDB: Link to cantataDB annotations (CNT0000583)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448026.1)
• Pfam: Domain of Unknown Function (DUF908) (PF06012.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;