Ll_transcript_431907

• Id Trinity: TRINITY_DN52142_c0_g2_i4
• Name Transcript: Ll_transcript_431907
• Sequence: TGAGGACAATAATTTGATGTTGCCTGATAACAGGGAATCATCCAAGGCAGATAGTGCAGAGCAAATTATTGAGCCATCTGATGCTTCAGTAATGAATATT GAGTCCTTTCTTCCAGATTGTGCTAACAATGTTGCTCGTTTACTTGAGACAATTCTTCATAATGCTGATACGTGTCGAATATTTGTTGAGAAAAAGGGGA TTGAAGCTGTTCTCCAGTTATTTACCTTGCCATTGATGCCTCCTATTGTTTCTCTTGGGCAGAACATATTTGTTGCTTTCAAGAACTTCTCCCCACAACA TAATGTTTCTCTTGTTCGCACTCTATGCTCCTTCTTGAGGGAACATCTGAAATCTACCAATGAGTTTTTAGATTTGGTGGGAGGAACTCAGATTGCTCTA GTTGAATCTGCAAAGCAGACAAAGGTGTTGAAATATCTTTCTAGTCTTGAAGGTCTCCTATCTCTTTCTGCATCTTTGTTAAAGGGAGCAGCAATTACTG TGGTCTCTGAACTAAGCACTTCAGATGCAAGTGTTTTGAAAGATATTGGGAGATCCTACAAAGAAATAATTTGGAAAATATCTTTGTGTAATGATTCCAT GGCAGAGGAAAATAACACTGATCAAGAACCCGAGATGTCACAGGTACCCTCACCTGATACTGTTGAAAGAGAGAGTGATGATGATGGAAATGTTCAGACA ATGAGATACACAAATTCAGTTTTTGCTGGGAGTGGTTCACATTCCATGTGGAGTGGAGAACGTGACTTTGTTTCTGTAGTTCGTTATGGAGAAAGTTTGC ACCGCCGTAGTCGGCATGGATTATCCCGTTTAAGAGGTGGATGGACTGGTAGTCACTTGGAAGCTTTAAACATTAATTCTGAGCCATCTTCAAGTTTGGT GGAGGTATCTTTATCCCATAATTTGATAAAGAAAAGCCCTGATGTTCTTGCCCTAGAGATTCTTAACAAGTTGGCTTCAACCATGCGCTCTTTCTTCAAT GCTCTGGTAAAGCGGTTCACTTCACCGAATCGCCGAAGACCTGACCCAGGGCCACCGAGCTCAGCTTCAAAGACTCTCAGAATTGTGTTAGCTACAAGTT TTCTTGAGGCTCTTAGTTTTTATGGGCACTATACTTATGCTGGACTTGAGATGTCACTTTCTGTAAAATGTAGATATCTTGGGAAAATTGTGGATGATAT GGCAGCTCTCATATTTGACAGCAGGCGTCGGAGTTGTTATACTGCCATGGTTAATAATTTTTATGTCAATGGGACGTTTAAAGAGATACTCACAACATTT GAAGCTACTAGTCAGTTGTTATGGACTCTTCCATGTACGTTTCCATCAGCAGACATTGATATTGGAAAGAAAGGGGATGGGAGTAAACTGTCCAATAACA TCTGGCTACTTGATACATTACAAAGCTATTGTCGTTTGCTTGAATATTTTGTAAACTCATCTTTACTTTTGTCCCCAATCTCAACATCTCAGGCAGAGCT TCTTATTCAACCAATTGCAGTTGGCCTGTCAATTGGACTCTTTCCACTTCCTAGAGACCCAGATGCATTTATTCGTATGTTGCAATCTCAGGTTGTGGAT GTGATACTACCGGTCTGGAATCATCCAATGTTTTCTAATTGTAGTCCTGGTTTCATTTCATCTATTATTTCACTTGTTACACATGTATACTCTGGTGTTG GAGATGTCAAGCAAAATCATGGTAACATTGTGGGAGGTGCAAACCAAAATTTCATGCCCCCACCACCTGATGAGACAACCATTGCCACCATTGTTGAGAT GGGATTTTCTAGGGCAAGGGCTGAGGAAGCACTGAGAAGAGTTGAAACAAATAGTGTTGAGATGGCCATGGAGTGGTTGTTTAGTCATGCTGATGATCCG GTCCAGGAGGATGATGAACTTACAAGGGCACTGGCTCTGTCCCTAGGAAATAGTTCTGAAAGTACTAAAGTTGATAGTGATGACAAGACTATAGATGTGC TAAATGAAGAGGGGCATGTGAAGAAACCTCCAGTTGATGATATACTTGTTGCCTGTGTCAAGTTGTTTCAGGGTAGTGGTTCTGTGGTATTTCAGTTAAC AGATTTTTTTGTTACACTTTGCAGTCAGAACAAAGGTGAAGGTCGTCCTAAAGTAATATCTTATCTTCTGCAGCAGCTAAAACTTTGTCCGTTGGATTTT TCGAAGGATAACTGTCAATTGAGTGTGTTAGCACATATTATAGCACTGCTTCTTTGTGAGGATGAAAGTACACGTGAAATTGCTGTTGAGAATGGCATCA TATCTACCACCATAGATATCTTGACAAACTTCAAAGGCACACATGATTCAGAGAAAGAACTATTGGCACCTAAATGCATTAGTGCTTTACTACTTATATT GGACCAGATGCTGCAGTCACGGGCAAAAACTGAGAGTACAGGTGGAATGCAAACTAGTTTTATACCTAATTCATCCGGGGACCATGGTTCCTTGCAATTT GCAGGTGCAGTTGTACATAGGGGGGACAAAATAGATGGGAATGAGAAAGAACCTGGTGTTGCCTTAGAGAACATACTGGTTATGTGGCCAGTTAACAAAA ACCCATGCTTTGGCTTTGCAATTCCTTGAAAATGGAGATCTGGATGCTCTTTTTGGTCTTCCAAAGAATTGCTTTTTTCCTGGGTATGACACTGTTGTTT CAGCTGTTGTCCGACATCTCCTTGAAGATCCTCAAACACTACAAACTGCCATGGAATTAGAGATACGACAAACTTTAAGTGGAAATCGCCATTTTGGACG TGTTTCTCCTCGATCATCTTGGCTTCCCAGCAAGCTCAATCTGTTCAACCACCAGCTTATGCACCACCTTCTGCTGAAGAAATTGATCCCGAGTTTTTAG CTGCTCTTCCTCCAGATATTGAAGCAGAGGTTTTGGCCCAACAAAGAGC
• Tissue: pods
• Gene name: LI_gene_190407;
• Additional information: details;

Expression of Ll_transcript_431907

FPKM

• PAB: 0.2
• PNAB: 0.4
• PS1: 1
• PS2: 0.5
• PS3: 0.6
• PW1: 0.5
• PW2: 1
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_431907

• Blastp: E3 ubiquitin-protein ligase UPL1 from Arabidopsis with 57.47% of identity
• Blastx: E3 ubiquitin-protein ligase UPL1 from Arabidopsis with 57.47% of identity
• Eggnog: ubiquitin protein ligase(COG5021)
• Kegg: Link to kegg annotations (AT1G55860)
• CantataDB: Link to cantataDB annotations (CNT0000539)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463243.1)
• Pfam: Domain of Unknown Function (DUF913) (PF06025.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;