Ll_transcript_431908

• Id Trinity: TRINITY_DN52142_c0_g2_i5
• Name Transcript: Ll_transcript_431908
• Sequence: GTTTAATGTATACAAAACATAAATTTATTTACATTATTCTTTCTCTTCACACCTTCTTCCCTCAGCTCAGCTTTCTTCTCCAAAATTCTTTGTTTCTCTT TCTCTCTACTTTCTCTCTCTTTCTTTCTCTCTCTCTACTTTCAACATTCACTCATAGAATTCACTTCAATTCTATCATATCATTCATTTCAGCAATTCGA TTTTTCTGTACCGATTGGAGGATCAATTCTCCATTGTGAGGGGATTGATCGAGTTTCGCTGAATCAATTTCTATTATCCCTGCGACACTGTCACTTCCGA AATGAAGTTGAAGAGAAAGAGGACACTTGAAGTGAGAACAGTTGGGAAATACTCCATAAGAGACACTTCTTTGAATTCAAAATTGTTTGCATTTGCACAA GGATTTGGTGGAAAGGAAGAGGGACTTGGATTAATTGCATCAGCTGCACCTAATGCCTGTGACCCTCTTGCTTATGAATTGGGTTATACCCTTCATTTTG AGTTTTATGCAGCAAATAAATCAGAGTGTGACATCAAGGTGTCTGAACCCTTGGTACAAGGATTGCAAATTATTCACTTATGTGACATCAACAAATGTGT GGAAACTGATCTGGAGCTTCTGCGTAAGTTAGTTACAGAATATAAGTTACCTGCCGGTTTAAGATTTTCTCTATTGACAAGATTGCGGTTTACAAGGGCA TTTGGTTCTTTGGCTTCTAGACAGCAATACACATGCATTCGTCTTTATGCTTTCACAGTTTTTATTCAAGCATGTAGTGATGCCAATGACCTGGTTTCGT TCCTTAATGCTGAGCCTGGATTTATCAATGAATTAGTGTCATTGCTGAGCTATGAAGATGCAGTCATGGAAAAAATCCGGATTTTATGCTTGCATTCATT AGCTGCTCTTTGCCAAGATCGATCCCATCAAACTTCAGTACTGACAGGGGTTACATCTGGTGGGCACCGTGGCATTTTATCTAGCCTGATGCAAAAAGCC ATTGACTGTGTTGTTAGCGGTGATAACTCAAGATGGTCTGTTCATTTTGCAGAAGCTCTATTATCGCTTGTCACTGTGTTGGTTTCATCATCATCATCAT CTGGGCGCTCTGCCATGTGTGAAGCAGGATTTATTCCTACTCTGTTACCCCTCCTTAAAGATACAAATCCACAGCATTTGCATCTGGTTGAAAAAGCTGT GCATATTTTAGAAGCTTTTATGGAATACAGTAATCAAGCTGTTGCATTGTTCAGAGATTGGGGAGGTTTAGATGATACTATCTCTCGCCTATATATTGAA GTCTCCCATGTAGAAAGTGGTGGAAAGCATCCTGATGAAAATTCTGAGTCTTGTGCTAGGAATGTACATATGAAAGAAGGTTCTTCTACTGGCCTAAATG GCATGCAACCCTTGTATTCTGAGCCATTAATTGCATATCATCGGCGGTTGCTGATGAAAGCTTTATTGCGTGCTATATCCCTTGGAACTTATGCCCGTGA AAGCATTGCTCATATCTATGGGTATGAAGAGAATGTGCTACCTTATTGCTTATGTATAATTTTCAGAAGAGCCAAAGATTTTGGTGGTGGAGTTTTTTCG CTCGCAGCTACTGTCATGAGAGACTTAATACAAAAGGATCCGACATGTTTTCCTGTATTAGATACAGCTGGTCTTCCGTCAGCCTTCTTGGATGCTATAA TGGACGATGTTCTGAACTCTGCCGAAGCTATCACATGCATCCCCCAGTGTTTGGATGCCTTATGTCTTAATAGTAATGGTCTCCAGGCTGTAAAAGATAA GAACTCTTTGAGGTGTTTTGTGAAAGTGTTTACTTCTAGAACATATTTGCGTACTCTTACAGGTGATACACCTGCATCTTTGTCTAGTGGATTGGATGAA TTAATGCGCCATGCTTCTTCGTTACGTGGGCCTGGAGTTGATATGTTGGTTGAGATTTTGGAAACTATCTCAAAAATTGGGTCAAGAACCGATTCACCGT CCTTGCCTTGCTCTTCAATCTCTGTTCCAATGGAAATGGATGGTGAGGACAATAATTTGATGTTGCCTGATAACAGGGAATCATCCAAGGCAGATAGTGC AGAGCAAATTATTGAGCCATCTGATGCTTCAGTAATGAATATTGAGTCCTTTCTTCCAGATTGTGCTAACAATGTTGCTCGTTTACTTG
• Tissue: pods
• Gene name: LI_gene_190407;
• Additional information: details;

Expression of Ll_transcript_431908

FPKM

• PAB: 0.2
• PNAB: 0.6
• PS1: 1.2
• PS2: 0.2
• PS3: 0
• PW1: 0
• PW2: 0.4
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_431908

• Blastp: E3 ubiquitin-protein ligase UPL1 from Arabidopsis with 63.72% of identity
• Blastx: E3 ubiquitin-protein ligase UPL1 from Arabidopsis with 63.72% of identity
• Eggnog: ubiquitin protein ligase(COG5021)
• Kegg: Link to kegg annotations (AT1G55860)
• CantataDB: Link to cantataDB annotations (CNT0001488)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463235.1)
• Pfam: Domain of Unknown Function (DUF908) (PF06012.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;