Ll_transcript_431046

• Id Trinity: TRINITY_DN52149_c2_g1_i24
• Name Transcript: Ll_transcript_431046
• Sequence: AGGGCATCAAAATCAAATTCACCACATTTTCCACTCTTCTCTCTCTCTCTCTCTCTCATTACTCTTCATCTTTCTCTCTCAGGTTAATTAATTCACAATG GCTGAACCTTCCAAGGTCATTCATGTTCGAAATGTGGGGCAGGAGATAACTGAAAATGATTTGCTTCAGCTGTTTCAGTCTTTTGGAGTCATAACAAAGC TAGTGATGCTGCGAGCAAAGAATCAGGCTCTTATCCAAATGCAAGATGTTGATACGGCAGTTAGTGCTTTACAATTTTATGAAAATGTTCAGCCAAATAT AAGGGGAAGGAATGTTTATATCCAGTTTTCCTCACATCAGGAACTAGCACCAATGGATCAAAATCAAGGACGGGGAGATGAGCCAAACCGAATTCTCTTA GTTACAATTCATCATGTGCTTTATCCTATGACAGTGGATGTGCTCCATCGAGTATTTTCTCCCCATGGATCTGTGGAAAAGATTGTAACATTTCAGAAGT CAGCTGGCTGTCAGGCTCTCATTCAGTATCAATCACGTCAGAGTGCTGTTACAGCGAAAAATGCACTTCAGGGACGCAATGTTTATGATGGTTGCTGTCA GCTGGACATTCAGTTCTCAAACCTTGATGAATTACAAGTGAACTACAATAATGACCGTTCAAGAGACTTCACGAACCCAAATCTTCCTGTTGAGCAGAAA GGCAGACCTTCACAACTCGATACCGGAAACATGTATGGGTCTGTGGGCAGGGCAGCTGGACCTCCGCACGTGAGTATTGTTTTTGCATCACGTTGAAGTC CCATCTGAGCTTATTTTTTAATAGTGGAATGCACGAGGGAGTTAAATTTATTTTTATATCTTACGAAAACTAGCATTACATATGTATGATGATTGATCTC TTTTACTTATCCTTTTAAATATGAATGTACAGAACATCAGGTTTGTATGATTGTAACCATTGATTTGTAGGAATATTTGTTGACCTCCAACAAAGTAACT CAATGATAAGGCTTTATTTTCTTAATTTGGGATGTGTTGGATTTTTGCTACTTGAACTGTGTGATTTTCTTTCATTTTGAGATAAATGACATAATAGTAT GAGCATAATATTATGATTTTTTCCGTAAAACCGAGTGCAGACATACATGCAAATGATTTTCTTTTCGATGTCTATATATTTGTTATTTATTTATTGAATT GTAGATGGGCAATGCTGATGCTATTATAGCTGCCTTTGGGGGAAATTTGCCTCCTGGAATAACGGGGGGAAATGACAGGTGTACTATTCTTGTCTCAAAT CTGAATCCCGATAGAATAGATGAGGATAAACTGTTCAACTTGTTCTCCATTTATGGGAACATTGTGAGAATTAAACTTCTTCGGAACAAACCAGATCATG CACTTGTCCAGATGGGAGATGGTTTCCAATCTGAATTGGCAGTACACTTTCTGAAGGGAACATTACTGTTTGGGAAGCAGTTAGAGGTGAACTTCTCAAA ACATGCAACAATACTCCAAGGTGCTGACACGCGCGAGTATGGCAATTCAAACCTGAATCGATTCAATCGTAATGCTGCAAAGAATTACCGATACTGCTGC TCTCCGACGTGGATGATCCATTTGTCCACTCTCCCTCAAGACATCACTGAAGAGGATATTGTTAGCCTGGTAGAGGAGCACGGAGTCATTCTGAATTGCA AGGTCTTCGAAATGAATGGGAAAAAGCAAGCTCTTGTTCAGTTCGAAAACGAGGAGCAAGCTACTGAAGCTCTTGTGTGCAAGCACGCAACATCTCTTTC GGGCTCAGTAGTCCGGATCTCCTTCTCTCAACTACAGAACATATGAGATTTTCGTTAAGTACTTGAGGACAACCTTAATGGTTGATTAAAGCACAATAGT GAGAATGATTCTGGATATAGGAGTGGATATTTTTTATGCAGATGATGAACTTGTTTATTATCTTTTACTCATATCTATGACATGCTCTTTGACTTTTTCT TTCAATCACTTCCTTCTCATATACATCACTGGTTCTTCAGGTTAGTGGTGGTAGATTAGTCTTGAAGAATATAGGTTAGCAAATGAGAGATTACATTTTG AACTTGTTGTATAGTGTCTTGAAATTCAGGCTAAGTTTCTATTATATTCTGAATCCTTATAAAAAGTTTGTTGTCCAACTGAGCAAAATGAGATTTCAAG AAATGGCAGATCTATT
• Tissue: pods
• Gene name: LI_gene_190454;
• Additional information: details;

Expression of Ll_transcript_431046

FPKM

• PAB: 4.5
• PNAB: 6.9
• PS1: 5.6
• PS2: 6.9
• PS3: 8.1
• PW1: 9.1
• PW2: 6.8
• PW3: 5.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_431046

• Blastp: Polypyrimidine tract-binding protein homolog 3 from Arabidopsis with 79.26% of identity
• Blastx: Polypyrimidine tract-binding protein homolog 3 from Arabidopsis with 76.44% of identity
• Eggnog: polypyrimidine tract binding protein(ENOG410XPMZ)
• Kegg: Link to kegg annotations (AT1G43190)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452744.1)
• Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF13893.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;