Id Trinity | TRINITY_DN52157_c0_g1_i3 |
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Name Transcript | Ll_transcript_431395 |
Sequence | GGAATAAAGGAGAGGAGGCGTTCAAAGCAATTGACCATTGTATTTAAGTGTGAGTGGTTCCTTTTGTCGCAATTGTCGAAGCCTCCAACGTAGTCGCGCA GCCACCCAATCCTCTTTCTCCTTCTCCTCTCATAGGTAAATAAACCCTTCTCTCTTATCTTCTCTTTCAGATCTATTACTTTCTTTCACACTCTTTCTCA CACCCTTTTTATCTCTTTGTTTTTTTATCTAAGGTATACTCTACACACCTTTCATTCCCTTTTCACTTAGATCTGTCTTTCTTTTTGTTCTTCTTGTAAG ATCTGATCTCAATTTTGCTTCTTCTCTAAGCTAAATCTCTTTTTTCTAACTGGGTTTTCCAAAGTTCTTTCCTTTTTCCAATTTTTTATTCGGATCTGTC TATGAATTTCTTATTTTTTATGAAATTGTTGAAAATATATGAGTCGATCCTTTAAATATCTGTGCTCAGATTTCCTCTTTTGATCCTGTGTTTTGCTAAT CTGTGTATTTTTTGGTTCAGATTTGGTTTCTTATATCATGGTTATGCTTAATCCTTCTGTGAAATAGTGGCACTTATTTGGAGAAAAAAAAAATCAATAT CTGTTTTCAAATCCTTAGATTGTTGTTTAATACCTTGGTTGATTTAAGATTTGTGTTATATTGTTAGTATTTTTTAATATGAAAAAACGAAGCCTGGTAT AGCATTTGATATTTTATTTACTATTCTGTGTTTTTGGATGGCATATTATCTTGTTTGTGACTCATGGATTGTTGTTTTAGTTACTGTTTTGTTGGATTTG TTTTTTTGGGTATTATTCTAGTCGTCAACGAGTACCGTTCATTATAATTTGTAAAATGAATGATTCCTGGCATATATGTTGTGATTCCCCATATTAATGT TTAGAAATTGTTGAGTTGTACCATGATATGTTTCATTTTATTATGGTAAAGTTAATATTTATTTCTACAATTATTTGGAAATAGAACTTCTCAATGATGG TATGATACAATTTAAACCTAGTTAGTTCGTGCTTTTCTGATTCCAATATATTTAGATCTGTTTATTTGCTTTGTGATTTTGCATGTGGGGTTGGTGGGAT GTTGTAGACGTAAACTACGGTTGTCTTGTGCTCCATTTTCTTATTGTTTTGGATCCTCTTCATATTTGTTAGTGATGTCTTTGCCACAGCAAGATGTTAT GGTCACCTTTGCTCGACTTATCAACTGTATTTGACATTGGGTCCTTGTATTCTTCAGGAAAGTCATCATGGTTGAGCAGGTTCAGCACCCTACAATCATG GACAAGGTTGCCAGCCAGCTCCATCGCCGGTCCAGTCTTTCTTCTGATGTTCAGAATTATGATGCAGCTTTCCGCAGGCCTGCTGTATATCAAAGGCGGT CATTTGGGAATTACTCAAATGCTGCATTGCAGTATCCACTGATGCCATCATGCGGAGCTACAAGTGATTTGTCTTCTGTCGCAACAGCCTCCCCTGTGTT TGCTGCTGCTCCTGCAGAGAAAGGACACTTTCTTATTGACTTTCTCATGGGTGGAGTTTCAGCTGCTGTGTCCAAAACTGCTGCTGCTCCCATTGAACGT GTTAAACTTTTGATCCAGAACCAGGATGAGATGATCAAAACTGGTAGACTTTCTGAGCCCTACAAGGGTATTGGCGATTGTTTTAAGCGAACCACGGCAG ATGAGGGTGTGGTTGCCCTATGGAGGGGTAACACCGCCAATGTCATTCGTTATTTCCCTACTCAGGCTTTGAACTTTGCATTTAAGGACTACTTCAAGAG GCTTTTCAACTTCAAGAAGGATAGGGATGGTTACTGGAAATGGTTTGCCGGAAACTTGGCCTCAGGAGGTGCTGCTGGTGCCTCATCCCTTTTATTTGTG TACTCCCTCGACTATGCTCGTACTCGTCTCGCTAATGATGCAAAGGCTGCAAAGAAGGGTGGAGAAAGACAATTCAATGGTCTTGTCGATGTCTACAAGA AGACATTGGCAACTGATGGTGTTGCTGGTCTTTACCGTGGTTTCAATATTTCATGTGTTGGAATCATTGTGTATCGTGGTCTCTACTTCGGAATGTATGA TTCTCTGAAGCCAGTTCTTTTGACTGGTAATTTGCAGGTTGGTTGCACTCTCTTTTTCTATGTGTTCATACTATCTTACTGGCTATATTTGATTTATTTC AGCTACCAAGTTATTTTAATTTGGCTAACTCAAGTGTGTTAGTATCTCATAGTGCTGGGTATTCCGATGTTTTGATCATTTGATTCCACCTTCAGCAGAA CCATATATTTCACCTTTTTATCTCATGTAGACATGTAGTCATGTCCTTTGCTGTTCTACTTATAAAATATATTTCAAACATAATATAATCCATATGTTCG GTGGCTTGACATGTCTCTATCAAATGGTTGTGTTTTTTTGCTGGTGTTTTATCGCAAAGGTGTTCTTTTAATTTTTCTGGAACGTTTCAAACATTTCCTA ACGACTACTGTGGTTTGTGTTGATGATTACAGGATAGCTTTTTCGCTAGCTTTGGTCTTGGATGGCTCATCACCAATGGTGCTGGTCTTGC BLAST |
Tissue | pods |
Gene name | LI_gene_190521; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_431395
Blastp | ADP,ATP carrier protein 1, mitochondrial from Gossypium with 79.61% of identity |
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Blastx | ADP,ATP carrier protein 1, mitochondrial from Gossypium with 78.64% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | egu-MIR172e (MI0020571) |
Ncbi protein | Link to NCBI protein (XP_019449581.1) |
Pfam | Mitochondrial carrier protein (PF00153.26) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |