Id Trinity | TRINITY_DN52158_c0_g1_i3 |
---|---|
Name Transcript | Ll_transcript_431846 |
Sequence | TGAAAAGAGACATAAAACGCAGCGTTTTAATGTTCTCATCATTTCCCAAATCCTCAATTTAGGGTTCTTCTTCTTATTCTTCAATCAATCTCATTCTCAC TGCATCACCATTCTCTCTCTTCTCTCCTCTAGCAATTTTGCAAATGAATGGATCAACTGGCCGGGGTGCTGGTGGAGGTGTGGACCTGTTTCTACCAAAT TATAAGTTGGGAAAAACACTTGGCATTGGGTCCTTTGGCAAGGTCAAAATTGCTGAGCATGTATTGACTGGTCATAAAGTTGCCATAAAAATCCTTAATC GCCGCAAGATAAAGAATATGGACATGGAAGAAAAAGTGAGAAGGGAAATCAAAATTTTAAGATTATTCATGCATCCTCATATTATACGACTTTATGAGGT CATAGAAACCCCAACTGACATATATGTGGTTATGGAGTATGTGAAATCTGGAGAGCTCTTTGATTATATAGTTGAGAAGGGTAGGTTGCAAGAAGATGAA GCCCGCAATTTTTTTCAGCAGATAATCTCTGGTGTGGAGTACTGTCACAGGAATATGGTGGTTCATAGAGACCTGAAGCCTGAGAATTTACTTTTGGACT CTAAATGTAATGTCAAGATTGCTGATTTTGGCTTGAGCAACATCATGCGTGATGGTCACTTTCTTAAGACAAGTTGCGGAAGCCCTAACTATGCTGCTCC AGAGGTCATCTCTGGGAAATTGTATGCTGGACCTGAAGTTGATGTCTGGAGTTGTGGTGTAATTTTATATGCTCTTCTCTGTGGCACTCTCCCCTTTGAT GATGAAAACATTCCGAACCTCTTCAAGAAAATAAAGGTCTCATTGTTCTTCATTTAAATATTATTTTTCCTTTTTTCTTGTGGGTTTGAAATGATTGATA GTTTACCTACCATTGTTCTAAACCATTTTCTTAACTGGTTTTGAGCTTGGCATTGTTCTGGTTTGAGTTTAACTAGGCCATAAATGCTTAAAGCCTAATA CTTTTTTGGTCCAAACTTATCATATTTTCTTTAGCTGTCCTTGTTTTCATTGAGATAGATGGGTGTTCCTACCTTGTTGCAAAGATAAGTTGGTCTAGCT AACATTGGTATGCATAAAAAGTTGCACATCAAAGCAGTAAATTACCATTAAAATCCCAAATAAAACAATTATCAACTTTGACGAGTAAATAATATATAAT GTTACAAGTCCCAAGATAACATATATTAGTAACCCTAACAAAAGGTGGAATTGTACTGCTTCATGGAGATCAATAACAACAGATGAAGATGACCATATTC CAACATTTCATCGTCATAAATTCATGATTCCAGTGGGATTCATCATCTGATAGATGAGTGAGAGGGAAATTGCCATTTGCATGGTTGAGAAGATCCCTGG TCAAAGGACAAATTACTGATTGCAATTTGCAGGGATGCTAGTGAGTCAAGGCGGTTGGGTCCATAAGGAACGAAAATTGTGCCATAGTTTATGCCACTAA GCCAGTTTCTTCAACCTGCCGGACTAGTGGAAATCGTCTAAGCCTGCACATCTTATGATCTTGTACTCATTCAAGTCATGATCTCAGGACTTTCATCTTT CTGAGATCTGATGTATTACCACTCTGGTAATTTCAGCCTGTAAGAAAGTCCAATCTTATGCATTAAAGTGAAACTTTGACAACTTTAAACTGTTTGGTGA CATTAATAATTCTTTCTGCCATTCAAATAAGATATATCTCTTCAAAGGTGTTATCTGCAAAGAGATTTAATTTTGCCTGTGAACTATGTCTCTACTTGTT GTTTCTTATAGGGTGGGATATACACTCTTCCAAGTCATCTGTCACCTGGTGCTAGAGATTTGATACCAAGGATGCTTGTGGTGGATCCTATGAAGAGGAT GACCATACCTGAGATACGTCAACACCCTTGGTTCCAAGCACGTCTTCCGCGATATTTAGCAGTGCCACCACCAGATACAATGCAACAAGCTAAAAAGATT GATGAGGAGATTCTTCAGGAAGTGGTTAATATGGGATTTGACAGGAATCAGTTAGTTGAATCTCTTTGCAACAGGCTACAAAATGAGGGTACTGTTGCAT ACTATTTGTTATTGGACAACCGGTTCCGTGTTTCTAGTGGCTATCTTGGAGCTGAGTTTCAAGAGACATTGGTTGGTTTGTTTTCTCTTTAGTTGCTGAA GATTTCATGAGTTGTCAAATAAATTGACTTAGCTTATATAATATTAAAGACATATTGGGGAATTTTTATCTATTTGGTTCTGGTACTCGTGTGTCTAATC TAAACACACTATTGCATTTATAATTACATGAATGCGGTATAATATTTTTACATAGTAAATGCTAATAAATCCTTATTGATACGTACATGTGCTGAAAGTC TGAAACTAATTTTGACATGTGGTAAATGCAACAAACTAGCTACATCTAACACTCCCCCCTCAAGCTCATATGTGCTAATCTCATTAAAATATATTCAACT CGGGATCCATTGAGGAATTTGGTGTGCATGTCAACAAGCTGATCACTGGAATGGACAAAGTCGGATGTATGAGGCATTGCAATGGCAGTTTTCAGCTGAA TGTATTCATTATATTCAGCAGCATCAGAAACAGTCACCTCCTCTAATGGAATAGGAGAAGCGACCTTGGTAATATTAGCTAACGTGTTTTGTTGAAGGGT CTTGGTGCGGCACTGTTCCTCAATATGACCAAAGTGGTTGTTGTAATTGCAGCATGGTCGTGAACAGTTATCACCACCTACGACCACCTCCTCTACTTCC ATGTTGGGGTGATTGGGTGACAAGTTATCTAGAGTCCACAGAGATAGAGAGAGGCAGAGTAGTCAATTGGGTGAATCATAGCAATTGTTCACTAGCACTA TCTTAGGATGGTACTGAAGGGCTGGGTAATGTCTAATTATGCAATGAATCAAGGCCAGGCAAAGCATGGACCATATAGAATTTGTTGTGTTGCTCCGAGT GCTTCTGTGCATTATCAATGAAGGTATAAGTGCTTCAAGGTCAGCAATGAAACTATCAAGCTTACCAGGTATTTTTTCATGTCCATGGCATCTTTCCTCA GATTAACGAGATTTGAAACGGTATAGAAACAATACACGAGAGTAACCTCCATGGAGGAAGTGTCGGCAAGTGAGTGTGGATGGAAAAAGCTCACACGCTG GGAAGAGGCAGAAGTGTAGGTCGCACGCTAGGAGAGATGCAACACGTGGAGGTGTGCGGCTGCGGCTGGAGGGTTGTCTGCTGTGTCTGTCAGGGATGGT GGCTGCACACCAGTGAATGCATGGTGGTGGGCTACAGAGGGCCAGGTTGCTGTATGAGTGGCTGAGGCAGAGTGGGGTGGTGGAAAAGGGAGAAGGGCTA TCTCGATGGAACCCTAAACTAGTACTGATACCAAATTAGGTTTTCATAATTGTGTCTAATGTTGACCATACACTAGTGTGTTTATACATGAATGGGGCAC AATATTATTACATGGTAAATGCTATTCAATCCCTAATGGTGTGTACGTATGCTGAAACTATTTTTGACATGTGCTAAATGTGCTACATTTAATGGTATCC CCATTGAAATGAGCAGCAGCTTCAATTATCTGCTACTGTGTATTAGAGCTATTGTTTGAGTTTCCATGTGATTGAATTTGTCTTTCTAGCTTATGGATTT TGCACCTCTGAAATTTCTGGCTTTCCGTCGATGATTTTTTCTTTTTTTTTCTCTTAGTTTTGGTTTTATAATGTTAATGTTAGGATTCTGGCTTCAATCG CATTCATTCCAGTGAAGTTGCTTCTCCAGTTGTTGGGAACCGCTTTCCAGGGTATATTGATTATCAAGGAGTGGGAATGAGGCCACAGTTCCCTGTTGAG AGAAAGTGGGCCCTTGGGCTTCAGTCTCGAGCCCATCCTCGTGAAATAATGACCGAGGTCCTTAAAGCTCTACAAGAGTTGAATGTTTCTTGGAAGAAGA TTGGACACTACAACATGAAGTGCAGATGGGTTGCTGGCATTCCTGGTCATCACGAAGGAATGATTAACAATTCTGTTCATAATAATCCTTACTTTCGAAA TGATTCCAGCATTATTGAGAATGATGCTGTTTCTAAATCAAATGTGGTCAAGTTTGAAGTACAGCTTTACAAAACTCGAGAAGAGAAGTATCTGCTTGAT CTTCAAAGGGTTCATGGTCCACAGTTTCTTTTCTTGGAACTGTGTGCCGCTTTCCTCGCGCAGCTTCGCGTTCTGTAGAGCAAAGATCATAAACAAACTC ACTAGGAAGACTTAGAGATGTGCCTTATGTTGCATGTGAATAAGCTTACAATGTAAATATAAGCTCTCTTTCAGCATGATTATGAGGCAATGCTAAATAT TATGTTAGCTCTTAATCATGTTCATTGACTAGGTCTACTTTTTTCATGGTGAATTAATTTGTATGAATCCCATGAAATTCTGTGGGAATTTTAATGAAAG AATTAGTCCCTAGCAGACAATACTATTTATGGTGTTGTAAATGATTGTTTTTACCCCTTTTTTGTGAGGGTATGTATGCATGCATGCATTATATTTAACA CTAATTCTGTATTGAATAACATTATTACATTACTTCCATTATGTTATAATTCATAGATGGTAGCAAAATGATAATGATAATGC BLAST |
Tissue | pods |
Gene name | LI_gene_190524; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_431846
Blastp | SNF1-related protein kinase catalytic subunit alpha KIN10 from Arabidopsis with 91.91% of identity |
---|---|
Blastx | SNF1-related protein kinase catalytic subunit alpha KIN10 from Arabidopsis with 92.92% of identity |
Eggnog | Serine Threonine protein kinase(COG0515) |
Kegg | Link to kegg annotations (AT3G01090) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_020989308.1) |
Pfam | Protein kinase domain (PF00069.24) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |