Id Trinity | TRINITY_DN52158_c0_g1_i6 |
---|---|
Name Transcript | Ll_transcript_431849 |
Sequence | CGAATTTCGAAGAACCCCAAATCTTCATTTCTCATCTTTCATTCTTCTCAATTCTCAATTTTAGGGTTCTTCCTTCTTCTTCATCAATTAATCTTATTCT TTCCTCAATCGCCTCTAGATTCTGGAAATGGATGGATCAACTGGCCGGGGTGGTGGTGGAGGTGTGGACATGTTTCTACCAAATTATAAGTTGGGAAAAA CACTTGGCATTGGGTCCTTTGGCAAGGTGAAAATTGCAGAGCATGTATTGACTGGTCATAAAGTTGCCATAAAGATCCTTAACCGCCGCAAGATAAAGAA CATGGAAATGGAAGAAAAAGTGAGAAGGGAAATCAAAATTCTAAGATTATTCATGCATCCTCATATTATACGTCTTTATGAGGTCATAGAAACCCCAACA GACATATATGTTGTTATGGAGTATGTGAAATCTGGAGAGCTCTTTGATTATATAGTAGAAAAGGGTAGGTTGCAAGAAGATGAAGCCCGCAATTTTTTCC AGCAGATTATCTCTGGTGTGGAGTATTGTCACAGGAATATGGTGGTTCATAGAGACCTGAAGCCTGAGAATTTACTTTTGGACTCTAAATGTAATGTGAA GATTGCTGACTTTGGCTTGAGCAATATCATGCGTGATGGTCACTTTCTTAAGACAAGTTGCGGAAGCCCTAACTATGCTGCTCCAGAGGTCATCTCTGGG AAATTGTATGCTGGACCTGAAGTTGATGTCTGGAGTTGTGGTGTAATTTTATATGCTCTTCTCTGTGGCACTCTCCCCTTTGATGATGAAAACATTCCGA ACCTCTTCAAGAAAATAAAGGTCTCATTGTTCTTCATTTAAATATTATTTTTCCTTTTTTCTTGTGGGTTTGAAATGATTGATAGTTTACCTACCATTGT TCTAAACCATTTTCTTAACTGGTTTTGAGCTTGGCATTGTTCTGGTTTGAGTTTAACTAGGCCATAAATGCTTAAAGCCTAATACTTTTTTGGTCCAAAC TTATCATATTTTCTTTAGCTGTCCTTGTTTTCATTGAGATAGATGGGTGTTCCTACCTTGTTGCAAAGATAAGTTGGTCTAGCTAACATTGGTATGCATA AAAAGTTGCACATCAAAGCAGTAAATTACCATTAAAATCCCAAATAAAACAATTATCAACTTTGACGAGTAAATAATATATAATGTTACAAGTCCCAAGA TAACATATATTAGTAACCCTAACAAAAGGTGGAATTGTACTGCTTCATGGAGATCAATAACAACAGATGAAGATGACCATATTCCAACATTTCATCGTCA TAAATTCATGATTCCAGTGGGATTCATCATCTGATAGATGAGTGAGAGGGAAATTGCCATTTGCATGGTTGAGAAGATCCCTGGTCAAAGGACAAATTAC TGATTGCAATTTGCAGGGATGCTAGTGAGTCAAGGCGGTTGGGTCCATAAGGAACGAAAATTGTGCCATAGTTTATGCCACTAAGCCAGTTTCTTCAACC TGCCGGACTAGTGGAAATCGTCTAAGCCTGCACATCTTATGATCTTGTACTCATTCAAGTCATGATCTCAGGACTTTCATCTTTCTGAGATCTGATGTAT TACCACTCTGGTAATTTCAGCCTGTAAGAAAGTCCAATCTTATGCATTAAAGTGAAACTTTGACAACTTTAAACTGTTTGGTGACATTAATAATTCTTTC TGCCATTCAAATAAGATATATCTCTTCAAAGGTGTTATCTGCAAAGAGATTTAATTTTGCCTGTGAACTATGTCTCTACTTGTTGTTTCTTATAGGGTGG GATATACACTCTTCCAAGTCATCTGTCACCTGGTGCTAGAGATTTGATACCAAGGATGCTTGTGGTGGATCCTATGAAGAGGATGACCATACCTGAGATA CGTCAACACCCTTGGTTCCAAGCACGTCTTCCGCGATATTTAGCAGTGCCACCACCAGATACAATGCAACAAGCTAAAAAGATTGATGAGGAGATTCTTC AGGAAGTGGTTAATATGGGATTTGACAGGAATCAGTTAGTTGAATCTCTTTGCAACAGGCTACAAAATGAGGGTACTGTTGCATACTATTTGTTATTGGA CAACCGGTTCCGTGTTTCTAGTGGCTATCTTGGAGCTGAGTTTCAAGAGACATTGGTTGGTTTGTTTTCTCTTTAGTTGCTGAAGATTTCATGAGTTGTC AAATAAATTGACTTAGCTTATATAATATTAAAGACATATTGGGGAATTTTTATCTATTTGGTTCTGGTACTCGTGTGTCTAATCTAAACACACTATTGCA TTTATAATTACATGAATGCGGTATAATATTTTTACATAGTAAATGCTAATAAATCCTTATTGATACGTACATGTGCTGAAAGTCTGAAACTAATTTTGAC ATGTGGTAAATGCAACAAACTAGCTACATCTAACACTCCCCCCTCAAGCTCATATGTGCTAATCTCATTAAAATATATTCAACTCGGGATCCATTGAGGA ATTTGGTGTGCATGTCAACAAGCTGATCACTGGAATGGACAAAGTCGGATGTATGAGGCATTGCAATGGCAGTTTTCAGCTGAATGTATTCATTATATTC AGCAGCATCAGAAACAGTCACCTCCTCTAATGGAATAGGAGAAGCGACCTTGCATGGTCGTGAACAGTTATCACCACCTACGACCACCTCCTCTACTTCC ATGTTGGGGTGATTGGGTGACAAGTTATCTAGAGTCCACAGAGATAGAGAGAGGCAGAGTAGTCAATTGGGTGAATCATAGCAATTGTTCACTAGCACTA TCTTAGGATGGTACTGAAGGGCTGGGTAATGTCTAATTATGCAATGAATCAAGGCCAGGCAAAGCATGGACCATATAGAATTTGTTGTGTTGCTCCGAGT GCTTCTGTGCATTATCAATGAAGGTATAAGTGCTTCAAGGTCAGCAATGAAACTATCAAGCTTACCAGGTATTTTTTCATGTCCATGGCATCTTTCCTCA GATTAACGAGATTTGAAACGGTATAGAAACAATACACGAGAGTAACCTCCATGGAGGAAGTGTCGGCAAGTGAGTGTGGATGGAAAAAGCTCACACGCTG GGAAGAGGCAGAAGTGTAGGTCGCACGCTAGGAGAGATGCAACACGTGGAGGTGTGCGGCTGCGGCTGGAGGGTTGTCTGCTGTGTCTGTCAGGGATGGT GGCTGCACACCAGTGAATGCATGGTGGTGGGCTACAGAGGGCCAGGTTGCTGTATGAGTGGCTGAGGCAGAGTGGGGTGGTGGAAAAGGGAGAAGGGCTA TCTCGATGGAACCCTAAACTAGTACTGATACCAAATTAGGTTTTCATAATTGTGTCTAATGTTGACCATACACTAGTGTGTTTATACATGAATGGGGCAC AATATTATTACATGGTAAATGCTATTCAATCCCTAATGGTGTGTACGTATGCTGAAACTATTTTTGACATGTGCTAAATGTGCTACATTTAATGGTATCC CCATTGAAATGAGCAGCAGCTTCAATTATCTGCTACTGTGTATTAGAGCTATTGTTTGAGTTTCCATGTGATTGAATTTGTCTTTCTAGCTTATGGATTT TGCACCTCTGAAATTTCTGGCTTTCCGTCGATGATTTTTTCTTTTTTTTTCTCTTAGTTTTGGTTTTATAATGTTAATGTTAGGATTCTGGCTTCAATCG CATTCATTCCAGTGAAGTTGCTTCTCCAGTTGTTGGGAACCGCTTTCCAGGGTATATTGATTATCAAGGAGTGGGAATGAGGCCACAGTTCCCTGTTGAG AGAAAGTGGGCCCTCGGGCTTCAGTCTCGAGCCCATCCCCGTGAAATAATGACTGAGGTCCTTAAAGCTCTGCAAGAGTTGAATGTTTGTTGGAAGAAGA TTGGACACTACAACATGAAGTGCAGATGGGCCACTGGCATTCCTGTTCATCAGGAAGGGATGGTTAACAATTCTGTTCATGATGATCATTACTTTGGAAA TGATTCCACCATTGTTGAGAATGATGCTCTTTCTAAATCAAATGTGGTCAAGTTTGAAGTGCAGCTTTACAAAACTCGCGAAGAGAAGTATCTGCTTGAT CTTCAAAGGGTCCAGGGTCCACAGTTTCTTTTCTTGGATCTCTGTGCTGCTTTCCTCGCGCAACTTCGCGTTCTCTAGAACACAGATTGTAAGCTCACAA GTCACAAGGAAGACTTAAGATGTGCCTTATGTTGCTTGTGAATAAGCTGACAATGTAAATATAAGTTCCCTTTCTGTATGGGTTTTATCTTCTATGTATT GTACTTTTTAGTATACCCTAAGTTTTCATATGGGTTACCATGATCATGAGGCAGTTCACTTCCTTAATCATGGTCTTTGGCTAGGTCTGTCTTTTTCACA GTGAATTGGTTTTTTGTATCAATCCGGTGAAAATCTCTGGGAATTTTATGAAGGAATTAGTCCCCAACAAACATTGCTAATTATGTTGTTAAAACCTATG TTGTAAATTGACTACTCATGCTTGTTGCATGGAAGCAGAAGGGTTGTTTGGCTAGGCTGCATTTAAAATAAGTTTGCAGGTTTAGATTTTTCCATTTGCT CCCAATGCATGAAATTCAACTACAGTTATGCTTTCATGGTTTTGTTTTTTGGAGTAAAAGTATGCATGATGTTTAACAAGTGTATTGAATAGTAATGTTG TTGTGAAGAATTCAATCCCTCCCTCTTTAACCTCATTTTAATTATG BLAST |
Tissue | pods |
Gene name | LI_gene_190524; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_431849
Blastp | SNF1-related protein kinase catalytic subunit alpha KIN10 from Arabidopsis with 92.77% of identity |
---|---|
Blastx | SNF1-related protein kinase catalytic subunit alpha KIN10 from Arabidopsis with 96.24% of identity |
Eggnog | Serine Threonine protein kinase(COG0515) |
Kegg | Link to kegg annotations (AT3G01090) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_020989308.1) |
Pfam | Protein kinase domain (PF00069.24) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |