Ll_transcript_429350

• Id Trinity: TRINITY_DN52167_c1_g1_i1
• Name Transcript: Ll_transcript_429350
• Sequence: ATTAGGCTTCTCTAGTAACCAAAGAATCGTAGTAATAATCGAAGTTGAGAAACCAAATCCTTGAAAGTGCGAAGTTTTCAACTTTCAACTCATCTCACTC TCTATTCAACTCTGTTCTTTTCCAAAGAACCCGATTCGTTTTGAATCGCAATGTCGAGTTTCCACGTCGGTGGCAAGGTCGTGGACAGAGTCGATTTATT GAGGAAGAAGCAATGGTTTTGGCGCGTCGACATTACTCCTTTCGCGGTTCTCTTTGGCGTGTGGATCGTTGTGATTTGTCCTAGTCTTGATTTCGTTGAT GCCGCTGTTGTTCTCGGCGCTCTCGCTTCTCTTAATATTCTTGTTTTGCTATTTACCGGTTGGTCTGTTGACTTCAAGTGTTTTGCTCACTATAGCAAGG TTAAAAATATTGATCAGGCTGATTTTTGCAAGATAACTCCGGCGAAGTTCTGTGGTTCCAAAGAAGTTGTGCCACTTCGTTTTCGGAGAATACCTGCAGG TTCATCATCAGCGGTGGATTTGGAAGAGATTTACTTTGAGTTTAGGAAACAATGTTTTGTCTATTCAAAGGAGAAAGGGAATTTTTGCAAACTTTCTTAC CCTACCAAGGAAACGTTTGGACATTATCTCAAGAGTAGTGGTCATGGCTCAGAAGCTAAAGTTCTTGCTGCTACTGAGAAATGGGGTCGGAATGTGTTTG ATTATCCTCAGCCGACATTTCAGAAATTGTTGAAAGAGCACTGCATGGAACCTTTTTTTGTATTTCAGGTTTTCTGTGTGGGTCTCTGGTGTTTGGACGA ATACTGGTATTACAGTTTGTTTACTCTATTTATGTTGTTTATGTTTGAGTCAACCATGGCAAAAAGTCGGTTGAAGACCCTAACTGAGTTAAGACGTGTT AGAGTGGATAGTCAGATCCTAATGGTACATCGCTGTGGCAAGTGGGTAAAACTTTCTGGTACGGATCTTTTGCCTGGGGATGTTGTCTCTATAGGTCGTT CTTCTGGTCAGAATGGAGAGGAGAAGTCTGTACCTGCAGACATGCTTATATTGGCTGGAAGTGCAATTGTGAATGAAGCTATTCTCACAGGCGAGTCTAC TCCTCAATGGAAGGTTTCAATTGCGGCTAGGGGCATTGAGGAGAAGTTGTCAGCAAAGCGAGATAAAAGCCATGTCTTATTTGGTGGTACTAAAATACTG CAGCACACTCCAGATAAGACCTTCCCTCTAAAAACGCCTGATGGTGGCTGCATAGCTGTTGTCCTGAGGACGGGATTTGAAACAAGCCAGGGAAAACTGA TGCGAACAATCTTATTCTCTACAGAAAGGGTGACTGCAAATAGCTGGGAAAGTGGACTGTTCATTTTATTCTTGGTTGTATTTGCTCTAATCGCTGCTGG TTATGTGCTTATTAAGGGGCTAGAAGATCCCACAAGGAGCAAGTATAAACTAATACTAAGTTGTTCACTTATTATTACGTCTGTGATACCTCCTGAGTTA CCAATGGAATTGTCAATAGCTGTTAATACTTCTCTGATTGCACTGGCCCGGCGTGGAATTTTTTGTACCGAACCTTTTCGAATACCATTTGCTGGGAAGG TTGATATATGTTGTTTTGACAAGACTGGGACTCTTACATCTGATGACATGGAGTTTTCCGGAGTTGTTGGGTTGGCAGGAACTACAGATTTGGAATCTGA TATGGGTAGAGTGCCTGTGCGAACTGTAGAAATCCTGGCTTCTTGCCATGCATTGGTATTTGTTGAGAATAAGCTGGTTGGCGATCCTCTTGAGAAGGCT GCACTTAAGGGAATTGATTGGAGTTATAAATCTGATGAGAAGGCTATTCCAAAAAAGGGAAATGGCAATCATGTCCAAATTGTTCAGCGGTACCATTTTG CATCTCATTTAAAACGAATGGCGGTTGTTGTTCGCATTCAGGAGGAATTTTTTGCCTTTGTTAAGGGTGCCCCAGAAATTGTTCAAGGTAGGCTCATTGA TGTTCCACCATCATATGTTGAAACCTACAAAAAACATACACGTCAGGGGTCTCGTGTTCTTGCTCTGGCTTACAAGTCTCTTCCTGACATGACAGTCAGT GAAGCTAGAGGTTTGGATAGGGATTTAGTGGAGAGTGGACTTACTTTCGCTGGCTTTGTGGTATTCAATTGTCCTATTAGATCAGATTCAGCCACTGTTT TATCTGAATTGAAAGGATCTTCACATGACTTGGTGATGATTAC
• Tissue: pods
• Gene name: LI_gene_190599;
• Additional information: details;

Expression of Ll_transcript_429350

FPKM

• PAB: 0.6
• PNAB: 2.5
• PS1: 2.4
• PS2: 1.9
• PS3: 2
• PW1: 1.8
• PW2: 1.3
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_429350

• Blastp: Probable manganese-transporting ATPase PDR2 from Arabidopsis with 79.8% of identity
• Blastx: Probable manganese-transporting ATPase PDR2 from Arabidopsis with 79.8% of identity
• Eggnog: P-type atpase(COG0474)
• Kegg: Link to kegg annotations (AT5G23630)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415297.1)
• Pfam: E1-E2 ATPase (PF00122.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;