Ll_transcript_429364

• Id Trinity: TRINITY_DN52167_c1_g1_i12
• Name Transcript: Ll_transcript_429364
• Sequence: AAAAATTTAATTGGGGTTAATGTGTATCAGTAATTAGGCATCCATTAATCAACAAGTTGTGAAGATTCGCAGACCGATACCAAATCCTTGCAACTACGAA CCTCATTTCACTCCATTCCACTCAACGTAACCAATTCCCTTCAGATCTGAGAAAACCACAACCAAACCCTAATTCCCTCACTTCGCAATTGAACCCGATT CATTCCTTTTGAATCGCAATGTCGAGTTTCCACGTTGGTGGCAAGGTGGTTGACAGAGTCGATTTGTTAAGGAAGAAGCAATGGTTTTGGCGCGTGGATA TTACGCCCTTCGCCGTTCTTTTTGGCGCGTGGGTCGCTGTGATTTGTCCTAGCCTCGATTTCATTGATGCTGCTATTGTTTTCGGTGCGCTCGTTTCTCT TAACATCCTCGTTTTGCTGTTTACCGGTTGGTCCGTTGATTTCAAGTGTTTCGCTCATTATAGCAAGGTTAAGAATATTGACCAGGCTGATTCTTGCAAG ATAACTCCGGCGAAGTTCTGTGGTTCGAAAGAAGTTGTGCCGCTTCATTTTCGAAAAATACCTGCAGGTTCTTCATTGGCCGTGGATTTGGATGAGATTT ACTTTGAGTTTAGGAAACAATGTTTTGTCTATTCAAAGGAGAAGGTGACTTTTTGCAAACTTTCTTACCCTACCAAGGAAACGTTTGGACATTATCTCAA GAGTAGTGGTCATGGCTCTGAAGCTAAAGTCCTTGCTGCTACTGAGAAATGGGGTCGGAATGTATTTGATTATCCTCAGCCTACATTTCAGAAATTGATG AAAGAGCACTGCATGGAACCTTTTTTTGTATTTCAGGTTTTCTGTGTTGGTCTCTGGTGTTTGGATGAATACTGGTATTACAGTCTGTTTACTCTATTTA TGCTGTTTATGTTTGAGTCGACCATGGCAAAAAGTCGATTGAAGACTCTAACTGAGTTAAGACGTGTTAGAGTGGATAGTCAGATCCTAATGGTACATCG CTGTGGCAAGTGGATAAAACTCTCTGGTACGGATCTATTGCCTGGGGATGTTGTCTCTATAGGTCGCTCTTCTGGTCAGAACGGAGAGGAGAAGTCTGTA CCGGCGGACATGCTTATATTGGCTGGAAGTGCAATTGTGAATGAAGCTATTCTCACAGGCGAGTCTACTCCTCAATGGAAGGTTTCAATCATGGCTCGGG GGATTGAGGAGAAGTTGTCAGCAAAGCGAGATAAAAGCCATGTCTTATTTGGTGGTACTAAAATACTGCAGCACACTCCAGATAAGACTTTTCCTTTAAA AACGCCTGATGGTGGCTGCTTGGCTGTTGTCTTGAGGACGGGGTTTGAAACAAGTCAAGGAAAGCTGATGCGAACAATCTTATTCTCTACAGAAAGGGTG ACTGCAAATAGCTGGGAAAGTGGACTGTTCATTTTATTCTTGGTTGTATTTGCTCTAATCGCTGCTGGTTATGTGCTTATTAAGGGGCTAGAAGATCCCA CAAGGAGCAAGTATAAACTTATACTTAGTTGTTCACTTATTGTTACTTCTGTGATACCTCCTGAGTTACCAATGGAATTGTCAATAGCTGTTAATACTTC TCTGATTGCACTGGCTCGGCGTGGAATTTTTTGTACAGAACCTTTTCGAATACCATTTGCTGGGAAGGTTGATATATGTTGTTTTGACAAGACTGGGACT CTTACATCTGATGACATGGAGTTTTCAGGAGTTGTTGATTTGATGGGAACAACAGATTTAGAATCTGATATGAGTAGAGTGCCTGTTCGAACTGTAGAAA TCCTGGCTTCTTGCCATGCCTTGGTGTTTGTTGAGAATAAGCTGGTTGGTGATCCTCTTGAGAAGGCTGCGCTTAAGGGAATTGATTGGAGTTATAGATC TGATGAGAAGGCTGCTCCAAAAAAGGGAAATGGCAATCATGTCCAAATTGTTCAGCGGTACCATTTTGCATCTCATTTAAAACGAATGGCGGTTGTTGTT CGCATTCAGGAGGAATTTTTTGCCTTTGTTAAGGGTGCCCCAGAAATTGTTCAAGACAGGCTAATTGATATACCACCATCATATGTTGAAACCTACAAAA AACATACACGTCAGGGGTCTCGTGTTCTTGCTCTGGCTTACAAGTCTCTTCCTGACATGACAGTAAGAATGTTGTGGGATTTACATTGAGTTTTATGAAC CTGTTTCCATCATATATTGAATTATGCACAGGGAACCGGAATGATGGTCAAAGTTTCCTGCCTTGCCATTTGAGTTTTATGAATCTGTTTCCATCATATA TTGAGTTATGAACAGGGAACCAGAACGCTGGTCAAAATTTCCCACCTTGCCGTTTGAGTTATTCAAAGAGGATAAACTTTCATTGATAGATAGTATTTTC AAATTGTTTCTATTTATGATTTAATTCCTAATCACACTTATTTGTGTAGAACTATAGATCCTTTGACATATAACCAAATTAACTTTCCCTTTTGTATACA ACAACACAATCACATTGTTCATGTTGTAGAGATTCAATAAGATTTTACATTGGCTGTCAGCAGCCTAACACAACCGTAGATAGTTTTCCCCTGTAGTATC ATTTTGTTTTATTAAACTTGGTCCCATACACTTAAGTGTAATTGGGAACTACACTTGAGTGTAATTGGGAACTGCATTACTTTTTCTCTTTGTTCCCGAA GAATGCTTAGTTTCCTTCCTCTCCCACCATTTGTTGCATCATCTATTACCACTTTGCTATTTTTATTTGAATTTTTAACATAAGCATGTTTACTGTTAAA TGCTTGAAGGTCAATGAAGCTAGAAGCTTGGATAGAGATTTAGTAGAGAGCAAACTTACTTTTGGTGGTTTTGTGGTATTTAATTGTCCTATCAGATCAG ACTCAGCCACGGTTTTATCTGAATTGAAAGGATCCTCACATGACTTGGTGATGATTACTGGTGACCAAGCTTTGACAGCTTGCCACGTTGCTAGACAAGT TCATATTATATCTAAACCTACGTTAATCCTTGGTTCAGCAAGTAATGGTGGCGGATATACTTGGGTGTCCCCGGATGAGACTGAAAATATTCGCTACAGT GCGAAAGAGGTTGAGTCTTTATCGGAGACTCATGATCTGTGTGTTGGAGGTGATTGCTTTGAGATGTTGCAACAGACATCAGCTCATCTTCTGGTCATTC CTTATGTTAAGGTGTTTGCTAGAGTTGCTCCTGAGCAAAAAGAACTTATCATGACCACTTTCAAAACAGTGGGACGAATAACATTGATGTGTGGGGATGG AACCAATGATGTTGGAGCACTGAAGCAGGCTGACGTAGGAGTTGCTCTTCTAAATGCTTTGCCCCCAACTCAAAGTGGAAACTCATCCGGGGAAGAAAGT TCCAAATCTGTCAAGCCAAAGAAATCTAAGCCTGCACCAGAAGCATCTGGAAAGACTGTTAGCCCAATTAGAGAAGGCACTTCAAACTCCAAGATTGTTT CAAAATCAGATTCTACCAACTCATCTGTTAACCGTCATCAAGCAGCGGTTGACATGCAACGAAAGAAGCTTAAGAAGATGATGGACGAGCTTAATGAGGA AGGAGATGGCCGTGCACCCATTGTCAAGCTTGGTGATGCCTCAATGGCATCCCCATTCACTGCAAAACATGCATCTGTTGCTCCCACCACTGACATTATT CGTCAAGGTCGCAGTACCCTAGTGACAACCCTCCAAATGTTTAAAATTCTGGGTCTCAACTGCCTTGCTACCGCATATGTGTTGAGTGTTATGTATCTGG ATGGTGTCAAGTTAGGTGATGTGCAAGCCACAATAAGTGGTGTCTTCACTGCTGCCTTTTTCCTCTTCATCTCACATGCCCGCCCTCTTCCCACTCTTTC AGCCGAACGTCCCCACCCCAATATCTTCTGTGCTTATGTATTGCTTTCCCTCTTGGGACAATTTACCATTCACCTGCTGTTTCTTATTTCATCTGTGAGA GAAGCTGAGAAATACATGCCAGATGAATGCATTGAACCAGATGCAGATTTTCATCCCAACTTGGTGAATACTGTTTCCTACATGGTGAGCATGATGCTTC AGGTGGCCACTTTCGCCGTGAACTACATGGGCCACCCCTTCAACCAGAGTATTTCTGA
• Tissue: pods
• Gene name: LI_gene_190599;
• Additional information: details;

Expression of Ll_transcript_429364

FPKM

• PAB: 0.2
• PNAB: 0.2
• PS1: 0.3
• PS2: 0.4
• PS3: 0.3
• PW1: 0.2
• PW2: 0.1
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_429364

• Blastp: Probable manganese-transporting ATPase PDR2 from Arabidopsis with 78.35% of identity
• Blastx: Probable manganese-transporting ATPase PDR2 from Arabidopsis with 78.35% of identity
• Eggnog: P-type atpase(COG0474)
• Kegg: Link to kegg annotations (AT5G23630)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415297.1)
• Pfam: E1-E2 ATPase (PF00122.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;