Ll_transcript_429365

• Id Trinity: TRINITY_DN52167_c1_g1_i13
• Name Transcript: Ll_transcript_429365
• Sequence: AAAAATTTAATTGGGGTTAATGTGTATCAGTAATTAGGCATCCATTAATCAACAAGTTGTGAAGATTCGCAGACCGATACCAAATCCTTGCAACTACGAA CCTCATTTCACTCCATTCCACTCAACGTAACCAATTCCCTTCAGATCTGAGAAAACCACAACCAAACCCTAATTCCCTCACTTCGCAATTGAACCCGATT CATTCCTTTTGAATCGCAATGTCGAGTTTCCACGTTGGTGGCAAGGTGGTTGACAGAGTCGATTTGTTAAGGAAGAAGCAATGGTTTTGGCGCGTGGATA TTACGCCCTTCGCCGTTCTTTTTGGCGCGTGGGTCGCTGTGATTTGTCCTAGCCTCGATTTCATTGATGCTGCTATTGTTTTCGGTGCGCTCGTTTCTCT TAACATCCTCGTTTTGCTGTTTACCGGTTGGTCCGTTGATTTCAAGTGTTTCGCTCATTATAGCAAGGTTAAGAATATTGACCAGGCTGATTCTTGCAAG ATAACTCCGGCGAAGTTCTGTGGTTCGAAAGAAGTTGTGCCGCTTCATTTTCGAAAAATACCTGCAGGTTCTTCATTGGCCGTGGATTTGGATGAGATTT ACTTTGAGTTTAGGAAACAATGTTTTGTCTATTCAAAGGAGAAGGTGACTTTTTGCAAACTTTCTTACCCTACCAAGGAAACGTTTGGACATTATCTCAA GAGTAGTGGTCATGGCTCTGAAGCTAAAGTCCTTGCTGCTACTGAGAAATGGGGTCGGAATGTATTTGATTATCCTCAGCCTACATTTCAGAAATTGATG AAAGAGCACTGCATGGAACCTTTTTTTGTATTTCAGGTTTTCTGTGTTGGTCTCTGGTGTTTGGATGAATACTGGTATTACAGTCTGTTTACTCTATTTA TGCTGTTTATGTTTGAGTCGACCATGGCAAAAAGTCGATTGAAGACTCTAACTGAGTTAAGACGTGTTAGAGTGGATAGTCAGATCCTAATGGTACATCG CTGTGGCAAGTGGATAAAACTCTCTGGTACGGATCTATTGCCTGGGGATGTTGTCTCTATAGGTCGCTCTTCTGGTCAGAACGGAGAGGAGAAGTCTGTA CCGGCGGACATGCTTATATTGGCTGGAAGTGCAATTGTGAATGAAGCTATTCTCACAGGCGAGTCTACTCCTCAATGGAAGGTTTCAATCATGGCTCGGG GGATTGAGGAGAAGTTGTCAGCAAAGCGAGATAAAAGCCATGTCTTATTTGGTGGTACTAAAATACTGCAGCACACTCCAGATAAGACTTTTCCTTTAAA AACGCCTGATGGTGGCTGCTTGGCTGTTGTCTTGAGGACGGGGTTTGAAACAAGTCAAGGAAAGCTGATGCGAACAATCTTATTCTCTACAGAAAGGGTG ACTGCAAATAGCTGGGAAAGTGGACTGTTCATTTTATTCTTGGTTGTATTTGCTCTAATCGCTGCTGGTTATGTGCTTATTAAGGGGCTAGAAGATCCCA CAAGGAGCAAGTATAAACTTATACTTAGTTGTTCACTTATTGTTACTTCTGTGATACCTCCTGAGTTACCAATGGAATTGTCAATAGCTGTTAATACTTC TCTGATTGCACTGGCTCGGCGTGGAATTTTTTGTACAGAACCTTTTCGAATACCATTTGCTGGGAAGGTTGATATATGTTGTTTTGACAAGACTGGGACT CTTACATCTGATGACATGGAGTTTTCAGGAGTTGTTGATTTGATGGGAACAACAGATTTAGAATCTGATATGAGTAGAGTGCCTGTTCGAACTGTAGAAA TCCTGGCTTCTTGCCATGCCTTGGTGTTTGTTGAGAATAAGCTGGTTGGTGATCCTCTTGAGAAGGCTGCGCTTAAGGGAATTGATTGGAGTTATAGATC TGATGAGAAGGCTGCTCCAAAAAAGGGAAATGGCAATCATGTCCAAATTGTTCAGCGGTACCATTTTGCATCTCATTTAAAACGAATGGCGGTTGTTGTT CGCATTCAGGAGGAATTTTTTGCCTTTGTTAAGGGTGCCCCAGAAATTGTTCAAGACAGGCTAATTGATATACCACCATCATATGTTGAAACCTACAAAA AACATACACGTCAGGGGTCTCGTGTTCTTGCTCTGGCTTACAAGTCTCTTCCTGACATGACAGTCAATGAAGCTAGAAGCTTGGATAGAGATTTAGTAGA GAGCAAACTTACTTTTGGTGGTTTTGTGGTATTTAATTGTCCTATCAGATCAGACTCAGCCACGGTTTTATCTGAATTGAAAGGATCCTCACATGACTTG GTGATGATTACTGGTGACCAAGCTTTGACAGCTTGCCATGTTGCTAGACAAGTTCATATTATATCTAAACCTACGTTAATCCTTGGTTCAGCAAGTAATG GTGGCGGATATACTTGGGTGTCCCCGGATGAGACTGAAAATATTCGCTACAGTGCGAAAGAGGTTGAGTCTTTATCGGAGACTCATGATCTGTGTGTTGG AGGTGATTGCTTTGAGATGTTGCAACAGACATCAGCTCATCTTCTGGTCATTCCTTATGTTAAGGTGTTTGCTAGAGTTGCTCCTGAGCAAAAAGAACTT ATCATGACCACTTTCAAAACAGTGGGACGAATAACATTGATGTGTGGGGATGGAACCAATGATGTTGGAGCACTGAAGCAGGCTGACGTAGGAGTTGCTC TTCTAAATGCTTTGCCCCCAACTCAAAGTGGAAACTCATCCGGGGAAGAAAGTTCCAAATCTGTCAAGCCAAAGAAATCTAAGCCTGCACCAGAAGCATC TGGAAAGACTGTTAGCCCAATTAGAGAAGGCACTTCAAACTCCAAGATTGTTTCAAAATCAGATTCTACCAACTCATCTGTTAACCGTCATCAAGCAGCG GTTGACATGCAACGAAAGAAGCTTAAGAAGATGATGGACGAGCTTAATGAGGAAGGAGATGGCCGTGCACCCATTGTCAAGCTTGGTGATGCCTCAATGG CATCCCCATTCACTGCAAAACATGCATCTGTTGCTCCCACCACTGACATTATTCGTCAAGGTCGCAGTACCCTAGTGACAACCCTCCAAATGTTTAAAAT TCTGGGTCTCAACTGCCTTGCTACCGCATATGTGTTGAGTGTTATGTATCTGGATGGTGTCAAGTTAGGTGATGTGCAAGCCACAATAAGTGGTGTCTTC ACTGCTGCCTTTTTCCTCTTCATCTCACATGCCCGCCCTCTTCCCACTCTTTCAGCCGAACGTCCCCACCCCAATATCTTCTGTGCTTATGTATTGCTTT CCCTCTTGGGACAATTTACCATTCACCTGCTGTTTCTTATTTCATCTGTGAGAGAAGCTGAGAAATACATGCCAGATGAATGCATTGAACCAGATGCAGA TTTTCATCCCAACTTGGTGAATACTGTTTCCTACATGGTGAGCATGATGCTTCAGGTGGCCACTTTCGCCGTGAACTACATGGGCCACCCCTTCAACCAG AGTATTTCTGA
• Tissue: pods
• Gene name: LI_gene_190599;
• Additional information: details;

Expression of Ll_transcript_429365

FPKM

• PAB: 0.9
• PNAB: 5.3
• PS1: 3.5
• PS2: 3.2
• PS3: 4.3
• PW1: 3.1
• PW2: 2.5
• PW3: 1.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_429365

• Blastp: Probable manganese-transporting ATPase PDR2 from Arabidopsis with 76.86% of identity
• Blastx: Probable manganese-transporting ATPase PDR2 from Arabidopsis with 77.07% of identity
• Eggnog: P-type atpase(COG0474)
• Kegg: Link to kegg annotations (AT5G23630)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019433909.1)
• Pfam: E1-E2 ATPase (PF00122.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;