Ll_transcript_429376

• Id Trinity: TRINITY_DN52170_c1_g2_i1
• Name Transcript: Ll_transcript_429376
• Sequence: AACAACCCCTTCATTCATTTTTCTCTATTTTATTATGTAAAAGCTTCGATTTTTATTGTTAAACTTTCATTTTTAGTGCTTATTCACCCAATTTCGATCT TTGTTGTTGTAGTTGAAGTGAATTAACCTTTACAGTTGCGTGAGTATTAGTAATTTATGCATATTTTTTTTATTGTTTTATTCACTCACTAACCTAATTA GCTTAGGAATGTGTGGGTGCTTTATTCTTCTATTTTCTCTCTCTTTTTTTATGTTTTTTGTTCATGTTGATATCTTTAACCTCAGTACCACATGTCAGTA AAAAATTAAAAGTGTTATAAATCTGAAGTTCTGAACTTCCAAGTTTCATATATTTAAATCAGAATCTAAATACAATTTCTGTTTCTCTTATATAACTATT GTTTGAAGCTTTTGAATTGTGTTATATGCTTTTTAATGAAGTTTCAAATCCTCAACAAAACAAAAACTTGTAGGATATTTGGAACACAACCTGGTATCCA AAAGCTGCAGATCATGTGAATACAGAGAAAACATGGTATGTTGTTGATGCTACAGACAAAGTTCTTGGAAGGCTCGCGTCAACGATTGCTATTCATATCA GAGGAAAAAATCTAGCAACCTTTACTCCCAGTGTTGACATGGGTGCATTTGTAATTGTGGTATGTATTTGTAGATAACATCAGTGTTGACATGGAAGCTC TGTTGATATAGACACATTTTATAAAAATGTTATTGTTGTTTACTTAATTTATATAATAATGTCCTAATTGAGAAAGAAGCATGTATTACATTTTACATTT TTGTATGTTGATTCTTATCGATGTCTTGTGTTCAATGTATGGTTTTGTACGGTGTTTGGGAATGCCTTAACTATGTCCTGAA
• Tissue: pods
• Gene name: LI_gene_190622;
• Additional information: -

Expression of Ll_transcript_429376

FPKM

• PAB: 0.4
• PNAB: 0.6
• PS1: 0.5
• PS2: 0.2
• PS3: 0.4
• PW1: 0.9
• PW2: 0.2
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_429376

• Blastp: -
• Blastx: 50S ribosomal protein L13, chloroplastic from Arabidopsis with 80% of identity
• Eggnog: This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly (By similarity)(COG0102)
• Kegg: Link to kegg annotations (AT1G78630)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413784.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;