Id Trinity | TRINITY_DN52182_c0_g1_i10 |
---|---|
Name Transcript | Ll_transcript_430914 |
Sequence | CTTTCAAAAATCCTTCACTTTCATCTTTCCTCTCCAATCTTCTCTTATTTATTTACATATCATTTTCCATTGCAAATCCATCTTTTTATTACCCTAATGG AGTGGAATCCTAACACTCTCCAATTTCTCTCAGAAACTTTCCTCAACACTCTCTCTCCGGTGCCGGAGCCCCGACGCCGCCGCTACCATCATCAGATCCG CTAAGCCGCCGCTGTCAACTTCAAAAACCACCTCCGTCACCGTTGGTCCCCTTCCGACGACAACGCCGCTACCATCATCGCCTCCGAGAAGGTGCAACTC AAATCCCTAATTGTTCTCCTAATGCTTTCGGCATCCCACAAAATCCAAAGCCAGCTCAGCGAAGCGTTAGCCTTAATCAGCAACCACGATTTCCCCAAAT CGTGGCCCGATTTGTTACCTGAACTCGTTGCTAACCTTAAGAACGCGTCGCAGGCTTCCGATTACGCCTCCGTTAACGGTATTCTCGGTACTGCTAATTC TATTTTCAAGAAATTTCGATTCCAGTATAAAACCAATGATTTGTTGCTTGATTTGAAATACTGTCTCGATAATTTCGCTGCTCCTTTGCTTGAAATATTT CTCAAAACTGCGTCCTTAATTGACTCGTCTGCGAACTCTGGCGTGATCCTGCGACCCCTATTTGAGTCGCAGAGGTTGTGCTGTAGAATATTTTACTCAT TGAACTTTCAGGAGCTCCCTGAGTTCTTTGAGGATCACATGAAGGAGTGGATGACCGAGTTTCGGAAATATCTTACGGCTAGTTATCCTGCTCTTGAGGG GAGTGGTCCTGATGGTGTTGCTGTTGTTGATGAGCTTAGGGCTGCAGTGTGTGAGAATATTAATCTTTACATGGAAAAGAATGAGGAGGAGTTTCAAGGT TACCTGAATGATTTTGCACTTGCTGTGTGGACATTACTCGGCAATGTGTCACAGTTGTCTAGTCGTGATAGGCTGGCTATCACTGCAATTAAGTTCCTTA CCACGATTAGCACCAGTGTTCACCATGCTTTGTTTGCTGGCGAAGGGGTTATACCACAGATTTGCCAGGGCATTGTGATTCCGAATGTGAGGTTGAGGGA TGACGATGAGGAACTCTTTGATATGAATTATATTGAGTTTATTAGAAGGGATATGGAAGGTAGTGATATTGATACTAGGAGGAGGATTGCTTGTGAGCTA CTTAAGGGAATTGCTATGCATTATGGAGATGCTGTCAGAAGCATAGTTTCTGCTCAAATACAAATTTTATTAAGTTCGTTTGCTGCAAATCCGGCGGAGA ATTGGAAGGACAAGGATTGTGCTATATACTTGGTAGTCTCTCTGGCAACCAAGAAGGCTGGTTCCAGTTATGTCTCCACTGAACTGGTTGATGTTCAAAG CTTTTTTGAATCTGTAATTGTCCCTGAGCTGCAAGGTCCTGATGTGAATGGGTATCCTATGCTTAAGGCCGGTGCATTCAAGTTTTTTACTATGTTTCGG GCTCAAATATCAAAGCATGTGGCGTTGAGGTTTTTTCAAGATTTAGTTCGCTTTCTTGCTGCAGAATCAAATGTTGTTCATTCTTATGCTGCCAGTTGTA TTGAAAAACTTTTGTTGGTAAAGGATGATGGTGGTAAAGCACGTTATACTTCAGCAGATATCAATCCAATTTTCCCGATGCTGATGAACAACCTTTTCAA TGCCTTGAAGCTCCCCGAGTCTGAAGAAAATCAATATGTGATGAAATGTATTATGAGGGTTCTTGGAGTTGCAGATATATCTGTTGATGTTGCTCGAGTC TGCATTGAGGGATTGGCCTCTCTTCTTGGTGAAGTTTGCAAAAATCCAAAAAATCCAGTCTTCAATCACTATATCTTTGAGTCTGTAGCCATTCTTGTGA AGCGGGCTTGTGAGAGGGATTTGTCTCTTATATCTGTCTTTGAAGCAAGCCTTTTTCCCAGGCTTGAAATAATATTGGCAAATGGTGTAACTGAGTTTTT CCCATACACATTTCAGTTGCTTGCTCAGCTTGTTGAGTTAAACAGACCACCCATCCCACCAATCTACATGCAGATATTTGAGATTCTTTTGTCACCTGAG TCATGGGAAAGAGGGGCAAACGTTCCTGCCCTTGTGCGTCTACTCCAGGCCTTCCTTCAAAAGGCACCGAATGAGATCAGCCAAGGGGATAGACTGACCA AGGTGCTTGGCATATTTGACAAACTTATAAAATCTAAAAGCACATCTGAACAAGGATTTTATGTGCTAAACACCGTCATTGAAAATCTTCAGTATGATGT TATTAAACCTTATATTTCTCACATATGGGCTGCCCTTTTTAGTGTGCTTCAGCAAAGCCGGACAGTGAAGCTGATCAAGTCTCTCTTGATTTTTATGTCA CTCTTTTTGATCAAGCATGGTGCTTCAAATGTTGTTGATTCTATGAACAGCGTACAGCCTGGTATCTTTATTGTGATCATGAATCAGTTCTGGATACCTA ACCTTAAGCTGATTACTGGAGCTATTGAGCTCAAGTTGACTGCAATTGCTTCAACTAGACTCATCTGTGAGTCTCCCGTCCTTTTGGATCCTGCCGCTTC TGAGTCCTGGGCTAAGATGGTGGACAGCATCATCACACTTCTTTCCCGGCCTGAACAAGATAGAGTTGAGGAGGATCCCGACATGCCAGATATTACTGAA AATGTGGGTTATACTGCCACCTTTGTTCGTCTTCACAATGCTGGAAAGAAAGAAGAAGATCCACTAAAAGATATAAGAGATCCCAGGGAATTTTTTGTTG CCTCATTGTCCCGTCTTTCTGCACTTTCTCCTGGGAGGTACCCCAAGGTCATCAGTGAAAATGTTGACCCTGCTAACCAAACAGCATTGCTTCAGCTTTG CAACACTTATAATCTCCAAATAGTTTGAGTACGTACTTGAGCTGCTGTTCTGTTTTTTGATCTTGCTTGTTGAATCTGTGTCAGTGAATTTTCCGTAATT CACTTTAGATATATATCTTGGTATCAATGATGTTGTCGAGTGTTCTAAAACTATTTGTTGCACAAGTTATATCTGTTTTTTTTTTGTATTCGTCTGAGCT CTTTTGGTCTATATACCAATGTATCTTCTTGACGCATTTACTTGGGTGGAATTTTAGTTGTTGCAATTTTTATACTTGACAGAGTGACTCCCTAGATGCT TTTTGCGCAATTTGATTAGGATAATTTCTTTAGTCTAT BLAST |
Tissue | pods |
Gene name | LI_gene_190700; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_430914
Blastp | Exportin-2 from Arabidopsis with 70.61% of identity |
---|---|
Blastx | Exportin-2 from Arabidopsis with 68.21% of identity |
Eggnog | Importin(COG5657) |
Kegg | Link to kegg annotations (AT2G46520) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019456149.1) |
Pfam | Cse1 (PF08506.9) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |