Ll_transcript_430918

• Id Trinity: TRINITY_DN52182_c0_g1_i14
• Name Transcript: Ll_transcript_430918
• Sequence: CTTACATAATACCCTGTTTCAAAACTACTCACTCCCCCTCTCTTCTTACACGCTCGATTTTCTGTCATCCTCAATTCTAAACCCGATATTCCATCACAAA CCCTAATAATGGACTGGAACCCTCAAACTCTCCAATTCCTCTCCGAAACTTTCCTCCACACTCTCTCTCCGGCACCGGAGCCCCGCCGCCGCGCCGAATC CGCCCTCTCCGAGGCTTCCGACCGCCCTAACTTCGCCCTCGCCGTCCTCCGCCTTATCGCTGAGCCTTCCGTCGATGACCAAATCCGCCAAGCCGCCGCT GTCAACTTCAAAAACCACCTCCGCCTCCGGTGGTCCCCTTCCTCCGATGAAGCCGCCGCCACCATCATCGACTCTGAGAAGGCTCAGATCAAAGCCCTAA TCGTTCCTCTCATGCTCTCGGCTTCCCCCAAGATTCAAAGCCAGCTCAGCGAAGCCCTAGCCCTAATCAGCAACCACGATTTTCCAAAATCGTGGCCCGA TTTGCTCCCGGAACTCGTCGCTAACCTCCAGAAAGTGTCGCAGGCCTCTGATTATGCTTCTATTAACGGTATTCTCGGCACTGCTAATTCTATTTTCAAG AAATTTCGTTACCAGTATAAAACCAATGATTTGTTGCTTGATTTGAAGTACTGCTTGGATAATTTCGCGGCTCCTTTGCTTGAAATTTTCCTCAAAACTG CTTCCTTAATTGACTCGGCTGCAAATTCTGGTGCGAACCTGCGACCCCTGTTTGAGTCACAGAGGTTGTGCTGTAGAATATTTTACTCATTGAACTTTCA GGAGCTCCCTGAGTTCTTTGAGGATCACATGAATGAGTGGATGACCTAGTTTCGGAAATATCTGACCAATAGTTATCCTGCTCTTGAGGGCAGTGGTCCT GATGGGGTTGCGGTTGTTGATGAGCTTAGGGCTGCTGTGTGCGAGAATATTAATCTTTACATGGAAAAGAGTGAGGAGGAGTTTCAAGGTTACTTGAATG ATTTTGCACTTGCTGTGTGGACTTTGCTTGGCAATGTGTCCCAGTTGTCTAGCCGTGATAGGCTGGCTATCACTGCGATCAAGTTCCTGACCACAGTTAG CACCAGTGTTCACCATGCTTTGTTTGCCGATGATCGGGTTATACCACAGATTTGCCAGGGCATTGTGATCCCGAATGTGAGGTTGAGGGAAGATGATGAG GAACTCTTTGAAATGAATTATATTGAGTTTATTAGAAGGGATATGGAAGGTAGTGATCTTGATACTAGGAGGAGGATTGCGTGTGAGCTTCTTAAGGGTA TTGCCATGCATTATGGAGATGCTGTCAGAAGCATAGTTTCTGCTCAAATACAAATTTTATTAAGTTCATTTGCTGCAAATCCGAGGGAGAATTGGAAGGA CAAGGATTGTGCCATATACTTGGTTGTCTCTCTGGCAACGAAGAAGGCTGGTTCCAGCTATGTGTCCACTGAACTTGTTGATGTTCAGAGCTTTTTTGAA TCTGTAATTGTCCCTGAGCTGCAAAGTCCAGATGTAAATGGGTTTCCTATTCTTAAGGCAGGTGCACTCAAGTTTTTTACTATGTTTCGGGCTCAAATAT CAAAGCATGTGGTGCTGAGGTTTTTTCAGGATTTGGTTCGCTTTCTTGCTGCAGAATCAAATGTTGTTCATTCTTATGCTGCCAGTTGTATCGAAAAACT CTTGTTGGTAAAGGATGAGGGGGGCAGAGCACGGTATACTTCTGAAGATATCACTCCAATTTTCCCTGTGCTGATGAACAACCTTTTCAATTCCTTGAAG TTCCCTGAGTCTGAAGAGAATCAATATATAATGAAGTGTATTATGAGGGTTCTTGGGGTTGCAGATATATCTGTTGATGTTGCTCGAATTTGCATTGAAG GATTGGCCTCTCTTCTTGGTGAAGTTTGTAAAAATCCTAAAAATCCCGTATTCAATCACTATATCTTCGAGTCTGTAGCCATTCTCGTGAAGCGGGCTTG TGAGAGGGACTTGTCTCTTATATCTATCTTTGAAGCAAGCCTTTTTCCTAGGCTTGAAGTAATACTAGCCAACGGTGTAACTGAGTTTTTCCCATACACA TTTCAGTTGCTTGCTCAGCTTGTTGAGTTAAACAGACCGCCCATCCCACCAATCTACATGCAAATATTTGAGATTCTTTTGTCACCTGATTCATGGGAAA GAGGCGCAAATGTTCCTGCCCTTGTGCGTCTTCTCCAGGCCTTCCTTCAAAAGGCACCGAATGAGATCAGCCAAGGGGATAGACTGACCAAGGTGCTTGG CATATTTGACAAACTTATAAAATCTAAAAGCACATCTGAACAAGGATTTTATGTGCTAAACACCGTCATTGAAAATCTTCAGTATGATGTTATTAAACCT TATATTTCTCACATATGGGCTGCCCTTTTTAGTGTGCTTCAGCAAAGCCGGACAGTGAAGCTGATCAAGTCTCTCTTGATTTTTATGTCACTCTTTTTGA TCAAGCATGGTGCTTCAAATGTTGTTGATTCTATGAACAGCGTACAGCCTGGTATCTTTATTGTGATCATGAATCAGTTCTGGATACCTAACCTTAAGCT GATTACTGGAGCTATTGAGCTCAAGTTGACTGCAATTGCTTCAACTAGACTCATCTGTGAGTCTCCCGTCCTTTTGGATCCTGCCGCTTCTGAGTCCTGG GCTAAGATGGTGGACAGCATCATCACACTTCTTTCCCGGCCTGAACAAGATAGAGTTGAGGAGGATCCCGACATGCCAGATATTACTGAAAATGTGGGTT ATACTGCCACCTTTGTTCGTCTTCACAATGCTGGAAAGAAAGAAGAAGATCCACTAAAAGATATAAGAGATCCCAGGGAATTTTTTGTTGCCTCATTGTC CCGTCTTTCTGCACTTTCTCCTGGGAGGTACCCCAAGGTCATCAGTGAAAATGTTGACCCTGCTAACCAAACAGCATTGCTTCAGCTTTGCAACACTTAT AATCTCCAAATAGTTTGAGTACGTACTTGAGCTGCTGTTCTGTTTTTTGATCTTGCTTGTTGAATCTGTGTCAGTGAATTTTCCGTAATTCACTTTAGAT ATATATCTTGGTATCAATGATGTTGTCGAGTGTTCTAAAACTATTTGTTGCACAAGTTATATCTGTTTTTTTTTTGTATTCGTCTGAGCTCTTTTGGTCT ATATACCAATGTATCTTCTTGACGCATTTACTTGGGTGGAATTTTAGTTGTTGCAATTTTTATACTTGACAGAGTGACTCCCTAGATGCTTTTTGCGCAA TTTGATTAGGATAATTTCTTTAGTCTAT
• Tissue: pods
• Gene name: LI_gene_190700;
• Additional information: details;

Expression of Ll_transcript_430918

FPKM

• PAB: 1
• PNAB: 0.9
• PS1: 1
• PS2: 1.3
• PS3: 1.5
• PW1: 1.3
• PW2: 2.2
• PW3: 1.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_430918

• Blastp: Exportin-2 from Arabidopsis with 70.22% of identity
• Blastx: Exportin-2 from Arabidopsis with 70.16% of identity
• Eggnog: Importin(COG5657)
• Kegg: Link to kegg annotations (AT2G46520)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456149.1)
• Pfam: Cse1 (PF08506.9)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;