Id Trinity | TRINITY_DN52182_c0_g1_i2 |
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Name Transcript | Ll_transcript_430904 |
Sequence | CTTTTTCCTTATTGGTCCATTAGCTACTCCTCTTAAATCCTTCAAAATCCCTCCAATTTCTATTCACTCTTCAAAGTTCACACACACTCTTTCAGAATCT CTCACTTTCTTCTTTCACTCTAGAATCTTCTGTTATTATTCACAAACCCTAATGGAGTGGAATCCTCAGACTCTCCAATTTCTCTCTGAAACCTTCCTCC ACACTCTCTCTCCGGCGCCAGAGCCCCGCCGCCGCGCTGAATCCGCCCTCGCAGACGCCGCCGACCGCTCTAACTTTGCCCTTGCCGTCCTCCGCCTTAT CGCCGAACCCTCGATCGATGAACAGATACGCCAAGCCGCCGCTGTCAACTTTAAAAACCACCTCCGCCACCGGTGGTCACCTTCCGATGACAACGCCGCC TCCATCATTGACTCCGAGAAGGGGCAGATCAAATCGCTAATTGTTCCTCTCATGCTCTCGGCTTCCCCGAAAATTCAAAGCCAGCTCAGCGAAGCCCTAG CCCTAATCAGCAACCACGATTTTCCAAAATCGTGGCCCGATTTGCTCCCGGAACTCGTCGCTAACCTCCAGAAAGTGTCGCAGGCCTCTGATTATGCTTC TATTAACGGTATTCTCGGCACTGCTAATTCTATTTTCAAGAAATTTCGTTACCAGTATAAAACCAATGATTTGTTGCTTGATTTGAAGTACTGCTTGGAT AATTTCGCGGCTCCTTTGCTTGAAATTTTCCTCAAAACTGCTTCCTTAATTGACTCGGCTGCAAATTCTGGTGCGAACCTGCGACCCCTGTTTGAGTCAC AGAGGTTGTGCTGTAGAATATTTTACTCATTGAACTTTCAGGAGCTCCCTGAGTTCTTTGAGGATCACATGAATGAGTGGATGACCTAGTTTCGGAAATA TCTGACCAATAGTTATCCTGCTCTTGAGGGCAGTGGTCCTGATGGGGTTGCGGTTGTTGATGAGCTTAGGGCTGCTGTGTGCGAGAATATTAATCTTTAC ATGGAAAAGAGTGAGGAGGAGTTTCAAGGTTACTTGAATGATTTTGCACTTGCTGTGTGGACTTTGCTTGGCAATGTGTCCCAGTTGTCTAGCCGTGATA GGCTGGCTATCACTGCGATCAAGTTCCTGACCACAGTTAGCACCAGTGTTCACCATGCTTTGTTTGCCGATGATCGGGTTATACCACAGATTTGCCAGGG CATTGTGATCCCGAATGTGAGGTTGAGGGAAGATGATGAGGAACTCTTTGAAATGAATTATATTGAGTTTATTAGAAGGGATATGGAAGGTAGTGATCTT GATACTAGGAGGAGGATTGCGTGTGAGCTTCTTAAGGGTATTGCCATGCATTATGGAGATGCTGTCAGAAGCATTGTTTCTGCTCAAATACAAAATTTAT TAAGTTCATTCGCGGCAAATCCCGGGGAGAATTGGAAGGACAAGGATTGTGCTATATACTTGGTAGTTTCTCTGGCAACTAAGAAGGCTGGTTCTAGTTA TGTCTCTACCGAACTTGTTGATGTTCAAAGCTTTTTTGAGTCTGTATCCCTGAGCTGCAAAGTCCAGATGTGAATGGATATTCTATGCTTAAGGCAGGTG GACTCAAGTTTTTTACTATGTTTCGGGCTCAAATATCAAAGCATGTAGTGTTGAAGTTTTTTTTCAAGATTTGGTTCGCTTTCTTGCTGCAGAATCAAAT GTTGTTCATTCTTATGCTGCCAATTGTATTGAAAAAATCTTGTTAGTAAAGAATGAGGGAGGTAAGGCACATTATACTTCCGAAGATATAAATCCAATTT TCCCAATGCTAATGACAACCTTTTCAATTCCTTGAAGTTGCCTGAATCTGAAGAGAATCAATATGTAATGAAATGTATTATGAGGGTTCTTGGAGTTGCA GATATATCTGTTGATGTTGCTCGGGTCTGCATTGAGGGGTTGTCTTCTCTTCTTGGTGAAGTTTGCAAAAATCCAAAAAATCCTGTCTTTAATCACTATA TTTTTTAGTCTGTAGCCATTCTTGTGAAGCGGGCTTGTGAGAGGGACTCATCTCTTGTATCTGCCTTTGAAGCAAGCCTTTTTCCTAGGCTTGAAATGAT ACTGGCCAATGATGTAACTGAGTTTTTGCGTTACACATTTCAGTTGCTTGCTCAGCTTGTTGAGTTAAACAGACCACCCATTCTACCAATATACATGCAG ATATTTGAGATTCTTTTGTCACCTGATTCATGGGAAAGAAAGCCAAATGTTCCTGCTCTTGTGCGTCTACTCCAGACTTTCCTTCAAAAGGCACCAAATG AGATCGGCCAAGGTGATAGACTCACCAAGGTGCTTGGCATATTTGAAAAACTTATACAATCTTCAAGACTGAACAAGGATTTTATGTGCTAAACACTGTC ATTGAAAATCTCAGATATGATGTTATTAAACCTTACATTTCTCACATTTGGGCTGCCCTGTTTAGGGAGCTCCAGAACAGGCGAACAGTAAAGCTGATCA AGTCCCTTTTGATATTCATATCGCCTTTTCTGATTAAGCATGGTTCTTCAAATGTTGTTGATTCTATGAACAGCGTACAGCCTGGTATATTTATTGTGAT TATGAATCAGTTCTGGATACCTAATCTTAAGCTGATTACTGGAGCTATTGAGCTCAAGTTGACTGCCGTTGCTTCAACTAGACTAATCTGCGAGTCTCCA GTCCTTTTGGATCCCGCAGCTTCTATGTCCTGGGGTAAGATGGCGGACAGCATCATCACACTTATTTCCCGGCCTGAACAAGATAGGGTTGAGGAGGAAC CCGACATGCCAGATTTTTCAGAAAATGTGGGTTATACTGCCACCTTTGTTCGTCTTCACAATGCTGGAAAGAAAGAAGAAGATCCACTGAAAGATATTAG AGATCCAAGGGAATTTTTTGTTTCTTCATTGGCCCATCTTTCTGCACTTTCCCCTGGGAGGTACCCTAAGGTCATCAGCGAAAAGGTTGATCCTGCTAAC CAAACAGCATTGCTTCAGCTTTGCAACACTTACAATCTCAAAATAGTTTGAGATCTTATTTTGGAATTGGACAGGAAATTACTATCTTGGGTCCTCAATC ATTGACAACATTTATGGGTTAACTGAGGTCATTTCTTGCATTGCTATGAAGTTGTTTTATCATAGCATCATCCATTTTGTGATTGCTATGGTCTTGTTCA GTGAACTGGGGTTTCTATTCCCGTCCCCCCTTCTTTTGTTGCAACTTCTCGTTCAGCATGCATCTGAGCAAATTGTAATGAATATTAGCAGGGAGTTGTG TAAAACTTCTTAGTGAAGAACTTGAATATGCAGGTATTTTGTTTTTGCGGTTAAGCTTCAGCTCTTGTCAATGTGATGGTTCAATTTTATTCAAGGTTTC ATTAGGGCTGAGATCTTATCCAGTACTGGAGGGTCCAATATTGGAATGTGAAACCCAGAAACAAGTTATCCTGCTTGATACCTTTGCTTCATATTTGGGG CTACGTTTGCAGCACCCAAACCCCATTTGCATGGCTCCGAAAGAGATTTTGCCCTTTATGTTTGAATATTTTACTTTGCTTTTTCAAAGGTGATTTGAGG TTTCAAATATGATATTGACAAAATAATTTTTTCCCCTATTTTGCGTTTAATGAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_190700; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_430904
Blastp | Exportin-2 from Arabidopsis with 72.43% of identity |
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Blastx | Exportin-2 from Arabidopsis with 65.96% of identity |
Eggnog | Importin(COG5657) |
Kegg | Link to kegg annotations (AT2G46520) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019459402.1) |
Pfam | Cse1 (PF08506.9) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |