Ll_transcript_430255

• Id Trinity: TRINITY_DN52187_c1_g8_i2
• Name Transcript: Ll_transcript_430255
• Sequence: CAAAAAGTTGTCATTCTTATTCTTCTTCTTCCATTGGTTCATCGTCTCTAGGGTTTAGCATGGGTTCACTTTCACAGCACAGCCAATGAATTCAACCTCC AAATGATGCCATCCTTTCACACTTGTCACATTGCATCCATCAATTCTGCAAAATATCCTGCAACTCGGTACTCTATTTTCCCCATTCATTTTTTCTCATT CTTCTAAGTTCAATATTTTATTGGCGAACCCATCGTTTCTACAGTGCAATGAGCTTCTCAAAGCTTATACTCCAAACAAATAACGCCGAATTGCTGCGAA AAACGTGTTTTTTGCTTATTTCGGAGTTGCAGAGATGATGGAACCGAATTCAAACTATGAATTCAATAATAGCCCTTTTAGGTCGAAGGGTGGTTAAATT TTATTCCCCTTTTTGGGTCATTTCGCGGAAATTTTGTGATCACAGGTTTGGTAGTGATCACGAGTTTGAATGTGTTGAGGAACCTTTGAAGAAAATGGTG TCAGATTATGATTCAAATTCGGAGGATAATGATAGGTTTCATTCTAATGAGGATTGGAGCAGTAACCAAAAACAATATTATTCACTTAGAAAGGTATTTT TGGATACTGTGAAGTTAGATGCTAAGAAGGTCCTTGAGGTTCTTCGGCAAGATGGTCCCGGCCTTGATGCAAGGTCGGGTTTAGATGAGTTGCATGTAAG GCCATCGGGGCTTCTTGTGAGGGAAGTTCTCTTCGGAATATTGAAGAGGATAAATGGCGAGAATAAGACGAGGTGTGCAAAGTTGGCATATAAGTTTTTC ACATGGTGTAATCAGCAGGAGAGTTACCAGCACACTGCGAATGGTTATGACTTAATTTTGGACATATATGCTCAATGTGAAGAGTTTAAGGCTTTGTGGA GGTTGGTTGATGAGATGATTGAGAAAGGGTTCCCAACTACTGCTCGTACTTTCAATATTTTGATTCGGACTTGTGGTGAGGCAGGCTTGGCAAAGAAATT GGTGGAGAGGTTCATTAAATCGAAGACGTTTAACTATCGGCCTTTTAAGCACTCATACAATGCAATTCTCCATGGTCTTCTAGTTTTAAAGCATTACAAG TTGATTGAGTGGGTTTATCAACAGATGTTGCTAGAGGGTTTTTCCTCGGATGTTTTAACTTATAATATTGTCATGTATGCCAAGTACAGACTCGGGAAGT TGGATCAGTTTCACAGACTGCTTGATGAAATGGGTGGAAATGGATTTTCTCCAGATTTTCATACGTACAACATTCTTCTTCATGTTCTTGGTAAAGGAGA CAAACCGCTTGCGGCTCTTAATCTTTTAAATCACATGAGAGAAGCAGGCATTGAGCCTGCTGTACTTCATTTCACCACTTTGATAGATGGACTCAGCAGG GCTGGGAATCTGGATGCTTGCAAATATTTTTTTGATGAGATGATAAAGAATGGGTGCATGCCAGATGTGGTGGCTTACACTGTAATGATAACCGGATATG TAGTGGCTGGTGAGCTTGAGAAAGCTCAGGAATTGTTTCATGAGATGATTTCTAGAGAACAAGTTCCAAATGTGTTTACATATAATTCCATGATTCGGGG ATTATGTATGGCAGGAAAGTTTGATGAAGCATGCTCTATGCTCAAGGACATGGAGACCAGAGGTTGTAGCCCAAACTTTGTTGTCTATAATTCATTAGTG CGTAGTTTACGGAATGCTGGAAAGGTTGCTGATGCTCATGAAGTGATACAACAGATGAATGAGAAGGGGAAGTATGCCCACATACTTTCGAGGTTTAAAG GGTATAAGGTATAGTCATATGGTTGATTGTCAAATTGGATGTTTTAACTCAAGGGGCATCAATGTTATCTGGTTAATTGAGACCAATTATCTGCTACTCC AACTGGTCAGAAGCTGGAGAAATAAAAACAAGGAATAGCAGCTTGAGATATTGTCAAGAGCCAGAGAGGCAATAGTTTGTTATGTTGTTTTCCACACGCA TTCTTAAGTCGGTTGATCTGCTTTAGTTGTGGCTTCAAAGGCAGCCATTACTCTGCCGCCATGTTCCAGACGTAGACTGAAAAGCAAGTCCCTTCTTGCT GTCTGGTTATTGCCATGGTTCATTTGTTGGCTTGATATGTTGCTGTGTTCATGCATGATAGGCATGTTCTGTTATCATGCAGAATGGAATCAGAGACCAA ACAAATAGGATGCTATCCAATAAGCAATATTCTCCAGGCCTGATTGTTTTATTTAAGATGCCTGTGATGTTGTTGGGCAAATGGAACTTTTTTGTAGACA GCAATTCTTCGTATACTACAAAACACTCCCTTGTGTTTAATTAATGGCATCAAAGAAACTAAGCACATGCTCTATTTTCACGCTGGAATGCCGTTTTCTG AATTCGTACTTCTGGTAATCTTTAGTGTTTTTACTTCTGGCAACTAATTGCAGTTGTTTTAGTTGTACGCCAATCTCTTCCTCCATTATTCGTTTGAAGT TTTCCTAGCTAAAAACAACAATTGTCAGATTTGTGTATATTTTTAGGAAGGGTTTTCTGGATAAACTTTTATCCCTCGCCAATTTATTGTGCTAATGATT CTTGCAAAGGCCAAATTGTCATTAACATAGTTTTTCCTGGTTTTGTTCAGTTACAATTACTTTTGAATATACTGCATAATAAAGTATATATCTTTGCT
• Tissue: pods
• Gene name: LI_gene_190735;
• Additional information: details;

Expression of Ll_transcript_430255

FPKM

• PAB: 1.4
• PNAB: 2.7
• PS1: 3
• PS2: 2.2
• PS3: 3.2
• PW1: 2.4
• PW2: 2.4
• PW3: 1.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_430255

• Blastp: Pentatricopeptide repeat-containing protein At1g55630 from Arabidopsis with 61.98% of identity
• Blastx: Pentatricopeptide repeat-containing protein At1g55630 from Arabidopsis with 61.98% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT1G55630)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019427282.1)
• Pfam: Pentatricopeptide repeat domain (PF13812.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;