Id Trinity | TRINITY_DN52188_c0_g1_i14 |
---|---|
Name Transcript | Ll_transcript_429743 |
Sequence | ATAATTATGAAAAAATGAATCTGCCCCAAATCCGCGAGTAGGTTTTCACTCACACACTCTTCCTTTCAATCTCTACAAAACCACACGCATCTGAGCAACC CAAACCAGAAGCTAAGGGTTTTTTCTGAACCATCATAGGGTTTCTCTAACTTCTCTTCTCCCTTCGCTTTTATACGCAATTCACTTTCGATCTCAGCATG GAAAATCGAGATTCATCATCGTCTTCTCCGTCTTCAACCGCTAACCGTGATTCTTCTTCCGTCACTGACAACGACAACGCCGTTTTTGCTGTCACTGTCT CGCTCGCCAAAGACGCTGTGTTGCATTTCCAGTCTGGCAAGTTCGCCGAATGCGTTGAGGTTTTGAACCAGCTGTTGCAGAAGAAGCAGCACGATCCCAA GGTCCTTCACAATATTGCAATTGCTGAATTCTTCCAAGATGGCTGTTCAGATCCCAAAAAGTTGCTTGAAGTACTTAATGGCGTCAAGAGGAAAAGTGAA GAGCTTGCTCTGGCTTCTGGAGATCAGGAAGAGTCATCTAATAATGTTGGAAACAAAGTTGTTTTGCGATCCAAAGGAAGTAATTCTTTGTCATATCAGT TTTCAGGTGCAAATAGCACCACTGCAATGTATACAGATGAATTTGACTCCTCTGTGGCAATCCTAAATATTGCTATCACCTGGTTCCATCTTCATAATTA TGCAAAGACATTATCTGTTTTGGAACCCCTATTCCAAAATATTGAACCCATAGATGAGACAACAGCTCTACATATTTGCCTTCTGCTACTTGATGCTAGC CTTGCCTGCCATGATGCATCAAAATCAGCCGATGTGTTGACTTATCTGGAAAAGGCGTTTGGTGTTAGTAGTGCACGTCAAGGAGACAATGGGAACACAA CACAACAACAATCAGAAAATCTTATTACAAAGTCTACACCTGTTGCTATTTGTGCATCGGCTGCTAATGCATCTAGTTCAGATTTTAGTTCAAATGTCAA TGCCTCTGAAAATATTCTATCTGGATCTGAAGACACACTTGATTATGAAGCAATGCTTTTGCATATGGGTGGACAAAATTTAGCAAGGCCAACAGGCCCA TCAGCAAATGATCTCTCAAGGGCTCTGCTTGATAGGTTCTCGACTGTTGATTTAAAGCTTAAGTTGCAACTTTACAAGGTCCAGTTTCTACTTCTTACGA GGAACTTGAAGCTAGCGAAACGTGAAGTCAAGCTGGTTATGAATATTGCACGTGGAAGAGATTCATCCATGGCTCTTCTTTTGAAATCTCAGCTTGAATA TGCTCGTGGTAACCACGGGAAAGCTATAAAGCTATTGATGGCATCAAGTAATCGGACAGATACAACATTTTCAAGCATTTTCAACAACAATCTTGGGTGC ATTTATTATCATCTCGGGAAATATCAGACGTCCTCATTATTCTTCTCAAAGGCATTAACTAATTATTCATCCATGCGGAAGGACCAACCATTGAAGCTTG CCACTTTCTCTCAGGACAATTCTCTCCTTATAATTTATAATTGTGGTGTGCAGTACTTGGCTTCTGGGAAACCCACACTTGCTGCGCACTGTTTCCAGAA GGCCAGTTTGGTGTTTTACAAACAGCCTCTCTTGTGGCTCCGACTTGCAGAGTGCTGTCTGATGGCTTTTGAAAAGGGCCTAATTAAATCAGACGGGGTT CCTCCAAAGAAGTTGGATGTTGGAGTTTGTGTTGTTGGGACGGGAAAATGGAGGCAACTTGTTGTGGAGGATCAGATTCCAGGAAATGTACATATGGACT CACCTGAAAAGGATAATTGTCAAAGCAATGATGGGCAGCTGAACTTATCGATGTCCATGGCCCGGCAGTGCCTCGCAAATGCTCTGCACTTGCTTGAAGC CTATAGTACAAATTATTTGAAGTCAGGATTGCCCACTAATTCTTCTGTGGAGGAAAATGATACAAGTGAATCTCCATCTTCAAAGAATTCAAATCTGAAG AACTTACATGTCATTGATTCAAAGGCATTATCAGTAGCAGGAGGTTTAGGTCAGGTTGATTCAAATGGGGACACAAAAGAGCAAAAGGGCGTATCTAGTC AAGAACTTGTTCTGAACTCTCTGTCCTATTATGAAGATGTCTGTAGAAGAGAAAACCAATTGGTCAAGCAAGCTGTTCTTGCTAATTTAGCATATGTGGA GCTGGAATTGGACAATCCCGAGAAGGCACTGTCAGTTGCAAAATCTCTCTTAGAACTTCCTGAGTGTTCCAGAATTTACATCTTTCTTGGCCATGTTTAT GCAGCAGAGGCTCTCTGCTTGCTGAAAAGACCAAAGGAAGCTGCTAAGCTCTTGTCATTTTATCTGTCTGGGGAACACAATGTTATATTGCCTTTCAGTC AAGAGGACTGTGAGAAATGGCGAGTGGAGAGGACTTGCGAATGTGAAGAGGTAAATGGAGGACCCATTGCAGCCAAGAATTATTGTCCTAAGGACAAAGG TATTGTTTTCCTCAAGCCAGAGGAGGCACGAGCAACAATTTATGCAAATTTTGCAGCAATATCGGCGATGCAGGGCGACTTTGAGGAAGCCAGTATATTG ATTTCACAGGCATTATCCATATCACCAAACAGTCCAGAAGCCATACTTACTGCAGTTTATGTGGATCTCTTGCTTGGTAAGCCACAGGAAGCTCTAGCGA AGTTAAAACGTTTTAGCCGTATTAGGCTCCTTCCCAGTGGAATAGTATTGAATAAATCTTCTTGAGGGGTGTATTCTGCGGTTTTACATGCCTGGCCCAC CTCTCAGCAATAGTTAGCAGGTAGCTTAATCATTCCATAGCATTTGTAACATATATTAGTTCAATTCAGAGAATAATTTTTGTGATTCATTTTCTTTATA ATTCTCAAATTTAGGGTCACTTATAGGTGGTGGCTGTGTTTTGGTTAGTGCTGATGCTGCCCACCTTTGAAATTTGAGGTGTAGCGTAGTTCTGATTCGG ATTGTGTTTTTAGAGGCTATTTTAGTTTTTGTTTCAAAAATAGAGGTCATGTGCTTAAATTCGGAAAACTGAAAAGTTGAGTTACTTTGGAATTCCATTT TTAATCTGATATCCATTTCAAATATAAACCTTATCCGGTGGGAGCACATCTTATGTCTCAAATATTGTATCATG BLAST |
Tissue | pods |
Gene name | LI_gene_190738; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_429743
Blastp | CCR4-NOT transcription complex subunit 10 from Mus with 28.06% of identity |
---|---|
Blastx | CCR4-NOT transcription complex subunit 10 from Danio with 30.05% of identity |
Eggnog | Ccr4-NOT transcription complex, subunit(ENOG410XQQJ) |
Kegg | Link to kegg annotations (78893) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019464220.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |