| Id Trinity | TRINITY_DN52188_c0_g1_i16 |
|---|---|
| Name Transcript | Ll_transcript_429745 |
| Sequence | GTCACACCTACCTGCACCAACATATATGCATGCACCAAAAAATCCCCTTAGAAAAAAAAATTAAGAATTATGAAAGAAGAAAAAAACTCACTCTATCTCA TGAGCATTTCTCTTTCTATCTGAATCTGCCCCAATTCGGCGAGTAGGTTTTCACTCTCTCACTGCAAAACCAGAAGCAAGTGGTTTTCCTTCATTTTTCT CACCTATTACATTTCTCTAACTTCTCTCGTCACTTCGATTTTCAATTCATTTCACTTTCATTCTACTTCGCTTCTCTCAATTTTAGGTTTCTTCTTCTCT TCACCAAAACCCTTCACAATTCAATTTCTATCCTGATTACTCGATCTCAGCATGGAAAACCGAGATTCATCATCGTCTTCTCCGTCTTCAACCGCTAACC GTGACGCTTCTTCCGCCGCAGAAACCGACCACGGCGTTTTCACTGTCACTGTCGCACTGGCCAAAGACGCTGCGTTGCATTTCCAGTCAGGAAAGTTCGC AGAATGCATCGAGGTGTTGAATCAGCTGTTGCAGAAGAAGCAACACGATCCCAAGGTCCTTCATAATATTGCAATTGCTGAATTCTTCCGTGATGGCTGT TCAAATCCCAAAAAATTGCTTGAAGTACTTAATGACGTCAAGAGGAAAAGTGACGAGCTTGCTCTGGCTTCTGGGGAACAGGAAGAGTCAGTTAATACTG TTGGAAACAAAGTTGTTTCAGGATCCAAAGGAAGCAATTCTTTGACACATCAGCTTTCAGGTGCAAATAGCACCATTACAATGTATACAGATGAATTTGA CTCCTCTGTGGCAATCCTAAATAATGCCATCATCTGGTTCCATCTTCATGATTATGCGAAGACACTATCAGTTTTGGAACCCCTATTCCAAAATATTGAA CCTATAGATGAGGCAACAGCTCTACATATTTGCCTTCTGCTGCTTGATGCTAGCCTTGCATGCCATGATGCATCAAAATCAGCTGATGTGTTGACTTATC TGGAAAAAGTATTTGGTGTTAGTAATGCGAGTCAAGGAGACAATGGGAACACAGCACAACAACAATCTGCAAATCTAATTGCGAAGTCTGCATCTGTTGC TATTAATGCATCAGCTGCTGATACATCCGGTTCAGATTTAGGTTCAAATGTCAATGCCTCCGAAAATCATCTATCTACAGCTTTGGCTGAAGACACACTT GATTATGAAGCAATGCTTCTGCATATGGGTGGACAAAATTTAGCAAGGCCAACAGGTTCATCATCAAATGATCTCTCAAGGGCTCTGATTGATAGGTTCT CTACTGTTGATTTAAAGCTCAAGTTGCAACTTTACAAGGTTCGGTTTCTGCTTCTTACTAGGAACTTGAAGCTAGCGAAACGTGAAGTCAAGCTGGCTAT GAATATTGCACGTGGAAGAGATTCATCCATGGCTCTTCTTTTGAAATCTCAGCTTGAATACGCTCGCGGTAACCACCGCAAAGCAATAAAGCTATTGATG GCATCAAGTAATCGGACAGACACAGCATTTTCAAGCATGTTCAACAACAATCTTGGGTGTATTTACTATCATCTTGGGAACTATCAGACATCTTCATTAT TCTTCTCAAAGGCATTAACTACTTGTTCGTCCATGCGGAAGGACCAGCCATTAAAGCTCGCCACTTTCTCACAGGATAATTCTCTCCTTATAGTTTATAA TTGTGGTGTGCAGTACTTGGCTTGTGGGAAACCCATACTTGCTGCTCACTGTTTCCAGAAGGCTAGTTTGGTGTTTTACAAACAGCCTCTCTTGTGGCTC CGACTTTCAGAGTGCTGTCTGATGGCTTTAGAAAAGGGCCTAATTAAATCAGGTGGGGTTCCTTCAGAGAAGATAGAGGTAGGAATTTCTGTTGTTGGGA CGGGAAAATGGAGGCAACTTGTTGTGGAAGATCAGATTCCCGGAAATGAACGAATGGACTCAACTGAAAGGGATAATTCTTGTCCAAGCGATGATGGGCG GCAGCTCAAGCTATCAATGTCCCTAGCCCGACAGTGCCTCACAAATGCTCTGCACTTGCTGGACTCCTATAGTACCAATTATTTGAAGTCTGGATTGCCC TCTAATTATTCTGTGGAGGAAAATGATACAAGTGAATCACCATCTTCAAAGAATTCAAATCTTAAGAAATTACATGGCACTGATTCAAAGGCGTTTTCAG TACCAGTAGGTTTAGGTCCGGTTAATTCAAATGGGGACACAAAAGAGCAAAAGGGAGGAACTAGTCAAGATCTCATTCAGAACTCTCTCTCCTATTATGA AGATGTCTGTAGAAGAGAAAATCAATTGGTTAAGCAAGCTGTTCTTGCTAATTTAGCATATGTGGAGCTGGAATTGGACAATCCTGTGAAAGCACTGTCA GTTGCAAAATCTCTCTTAGAACTTCCTGAATGTTCCAGAATTTACGTCTTTCTTGGCCATGTTTATGCAGCAGAGGCTCTCTGCTTGCTGAAAAGACCAA AGGAAGCTGCTAAGCTCTTGTCATTTTATTTGTCTGGGGGACACAATGTTATATTGCCTTTCAATCACGAGGACTGTGAGAAATGGCGAGTGGAGAGCAC TTCTGAATTTGAAGAGGTAAATGGAGGATCCGTGGCAGCGAAGAATTCTTGTCTTGAGGACTCTCAAAGTATTGTTTTCCTCAAGCCAGAGGAGGCACGG GCAACAATTTATGCAAATTTTGCCACAATATCTGCGATGCAGGGTGACTTTGAGGAAGCCAATATACTGGTTTCACAGGCATTATCCATATCACCAAACA GTCCAGGAGCCACTCTTACTGCAGTTTATGTGGATCTCTTGCTTGGTAAGTCACAGGAAGCTCTAGCAAAATTAAAATGCTGTAACCGGACTAGGTTCCT TCGCAGTGGAGTAATATTGAATCAATCTTCTTGAGTGATGTATTCGGCAGTTTGACATCCCTGGCCCACCTCTCAGCATTTGTTAGCAGGTAGCTTAATC ATTCCATAGCCATTTGTAACATATATAAGTTCAATTCAGACTTCAGAGAATAATTTGTGATTCCTTTTCTTTATAATTCTCAAATTCCGGGTTCAATTAT AGGTGGCGGCTATGTTTTGGTTAGTGCTGGTGCTGCCCCCACCTTTGAAATTTGAGGTGTAGAGTAGGTCTGATTCAGATTGTGTTTTTAGAGGCTATTT TAGTTTGTTTCAAAAATAGAGGTCATGCATGTGCTTATATTCGGAAAACTGAATAGTTCATAGTTACTTCGGAATTCCATTTTTAATCTGGAGTTTATTG TACTCTAATTCTCACTCCCATGAAAGATCTTGTGACATGTTTTATGTCTCTACTAAGGGTATGTGGTAGATGTCCTGTTTTTCTTTTCATTATTTTTAGA TTTTTTTTTAATTTCTTCATTATTGGAATGAAGCATCGAGTTGCAAATAATGCAACGATTATGTTTAGGTACCTGATACGGAAAACCTTTTACATTTTAT CACTCAGGATTCAAATATCCATCTGTTATTGTATTGAAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_190738; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_429745
| Blastp | CCR4-NOT transcription complex subunit 10 from Danio with 29.86% of identity |
|---|---|
| Blastx | CCR4-NOT transcription complex subunit 10 from Danio with 30.03% of identity |
| Eggnog | Ccr4-NOT transcription complex, subunit(ENOG410XQQJ) |
| Kegg | Link to kegg annotations (449918) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440592.1) |
| Pfam | Tetratricopeptide repeat (PF13181.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |