Ll_transcript_429746

• Id Trinity: TRINITY_DN52188_c0_g1_i17
• Name Transcript: Ll_transcript_429746
• Sequence: GTCACACCTACCTGCACCAACATATATGCATGCACCAAAAAATCCCCTTAGAAAAAAAAATTAAGAATTATGAAAGAAGAAAAAAACTCACTCTATCTCA TGAGCATTTCTCTTTCTATCTGAATCTGCCCCAATTCGGCGAGTAGGTTTTCACTCTCTCACTGCAAAACCAGAAGCAAGTGGTTTTCCTTCATTTTTCT CACCTATTACATTTCTCTAACTTCTCTCGTCACTTCGATTTTCAATTCATTTCACTTTCATTCTACTTCGCTTCTCTCAATTTTAGGTTTCTTCTTCTCT TCACCAAAACCCTTCACAATTCAATTTCTATCCTGATTACTCGATCTCAGCATGGAAAACCGAGATTCATCATCGTCTTCTCCGTCTTCAACCGCTAACC GTGACGCTTCTTCCGCCGCAGAAACCGACCACGGCGTTTTCACTGTCACTGTCGCACTGGCCAAAGACGCTGCGTTGCATTTCCAGTCAGGAAAGTTCGC AGAATGCATCGAGGTGTTGAATCAGCTGTTGCAGAAGAAGCAACACGATCCCAAGGTCCTTCATAATATTGCAATTGCTGAATTCTTCCGTGATGGCTGT TCAAATCCCAAAAAATTGCTTGAAGTACTTAATGACGTCAAGAGGAAAAGTGACGAGCTTGCTCTGGCTTCTGGGGAACAGGAAGAGTCAGTTAATACTG TTGGAAACAAAGTTGTTTCAGGATCCAAAGGAAGCAATTCTTTGACACATCAGCTTTCAGGTGCAAATAGCACCATTACAATGTATACAGATGAATTTGA CTCCTCTGTGGCAATCCTAAATAATGCCATCATCTGGTTCCATCTTCATGATTATGCGAAGACACTATCAGTTTTGGAACCCCTATTCCAAAATATTGAA CCTATAGATGAGGCAACAGCTCTACATATTTGCCTTCTGCTGCTTGATGCTAGCCTTGCATGCCATGATGCATCAAAATCAGCTGATGTGTTGACTTATC TGGAAAAAGTATTTGGTGTTAGTAATGCGAGTCAAGGAGACAATGGGAACACAGCACAACAACAATCTGCAAATCTAATTGCGAAGTCTGCATCTGTTGC TATTAATGCATCAGCTGCTGATACATCCGGTTCAGATTTAGGTTCAAATGTCAATGCCTCCGAAAATCATCTATCTACAGCTTTGGCTGAAGACACACTT GATTATGAAGCAATGCTTCTGCATATGGGTGGACAAAATTTAGCAAGGCCAACAGGTTCATCATCAAATGATCTCTCAAGGGCTCTGATTGATAGGTTCT CTACTGTTGATTTAAAGCTCAAGTTGCAACTTTACAAGGTTCGGTTTCTGCTTCTTACTAGGAACTTGAAGCTAGCGAAACGTGAAGTCAAGCTGGCTAT GAATATTGCACGTGGAAGAGATTCATCCATGGCTCTTCTTTTGAAATCTCAGCTTGAATACGCTCGCGGTAACCACCGCAAAGCAATAAAGCTATTGATG GCATCAAGTAATCGGACAGACACAGCATTTTCAAGCATGTTCAACAACAATCTTGGGTGTATTTACTATCATCTTGGGAACTATCAGACATCTTCATTAT TCTTCTCAAAGGCATTAACTACTTGTTCGTCCATGCGGAAGGACCAGCCATTAAAGCTCGCCACTTTCTCACAGGATAATTCTCTCCTTATAGTTTATAA TTGTGGTGTGCAGTACTTGGCTTGTGGGAAACCCATACTTGCTGCTCACTGTTTCCAGAAGGCTAGTTTGGTGTTTTACAAACAGCCTCTCTTGTGGCTC CGACTTTCAGAGTGCTGTCTGATGGCTTTAGAAAAGGGCCTAATTAAATCAGGTGGGGTTCCTTCAGAGAAGATAGAGGTAGGAATTTCTGTTGTTGGGA CGGGAAAATGGAGGCAACTTGTTGTGGAAGATCAGATTCCCGGAAATGAACGAATGGACTCAACTGAAAGGGATAATTCTTGTCCAAGCGATGATGGGCG GCAGCTCAAGCTATCAATGTCCCTAGCCCGACAGTGCCTCACAAATGCTCTGCACTTGCTGGACTCCTATAGTACCAATTATTTGAAGTCTGGATTGCCC TCTAATTATTCTGTGGAGGAAAATGATACAAGTGAATCACCATCTTCAAAGAATTCAAATCTTAAGAAATTACATGGCACTGATTCAAAGGCGTTTTCAG TACCAGTAGGTTTAGGTCCGGTTAATTCAAATGGGGACACAAAAGAGCAAAAGGGAGGAACTAGTCAAGATCTCATTCAGAACTCTCTCTCCTATTATGA AGATGTCTGTAGAAGAGAAAATCAATTGGTTAAGCAAGCTGTTCTTGCTAATTTAGCATATGTGGAGCTGGAATTGGACAATCCCGAGAAGGCACTGTCA GTTGCAAAATCTCTCTTAGAACTTCCTGAGTGTTCCAGAATTTACATCTTTCTTGGCCATGTTTATGCAGCAGAGGCTCTCTGCTTGCTGAAAAGACCAA AGGAAGCTGCTAAGCTCTTGACATTTTATTTGTCTGAGGGACACAATGTTATATTGCCTTTCAATCAAGAGGACTGTGAAAAATGGAGAGTGGAGAAGAC TTCTGAATTTGAAGAGTTGAATGGAGGAGGGTCCATGGAAACCAAAAATTCTTGTCTTGAGGATACCCAAAGTATTGTTTTCCTCAAGCCAGAGGAGGCA CGTGCAACAATTTATGCAAATTTTGCTGCAATATCCGCGATGCAGGGTGACTTGGAGGAAGCCAGCTTACTGATTTCACAGGCATTATCCATATCACCAA ACAGTCCAGAAGCCATACTTACTGCAGTTTATGTGGATCTCTTGCTTGGTAAGCCACAGGAAGCTCTAGCGAAGTTAAAACGTTTTAGCCGTATTAGGCT CCTTCCCAGTGGAATAGTATTGAATAAATCTTCTTGAGGGGTGTATTCTGCGGTTTTACATGCCTGGCCCACCTCTCAGCAATAGTTAGCAGGTAGCTTA ATCATTCCATAGCATTTGTAACATATATTAGTTCAATTCAGAGAATAATTTTTGTGATTCATTTTCTTTATAATTCTCAAATTTAGGGTCACTTATAGGT GGTGGCTGTGTTTTGGTTAGTGCTGATGCTGCCCACCTTTGAAATTTGAGGTGTAGCGTAGTTCTGATTCGGATTGTGTTTTTAGAGGCTATTTTAGTTT TTGTTTCAAAAATAGAGGTCATGTGCTTAAATTCGGAAAACTGAAAAGTTGAGTTACTTTGGAATTCCATTTTTAATCTGATATCCATTTCAAATATAAA CCTTATCCGGTGGGAGCACATCTTATGTCTCAAATATTGTATCATG
• Tissue: pods
• Gene name: LI_gene_190738;
• Additional information: details;

Expression of Ll_transcript_429746

FPKM

• PAB: 0.3
• PNAB: 0.3
• PS1: 1.2
• PS2: 0.3
• PS3: 1
• PW1: 0.5
• PW2: 1.1
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_429746

• Blastp: CCR4-NOT transcription complex subunit 10 from Danio with 30.89% of identity
• Blastx: CCR4-NOT transcription complex subunit 10 from Danio with 31.28% of identity
• Eggnog: Ccr4-NOT transcription complex, subunit(ENOG410XQQJ)
• Kegg: Link to kegg annotations (449918)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440592.1)
• Pfam: Tetratricopeptide repeat (PF13181.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;