| Id Trinity | TRINITY_DN52189_c4_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_429308 |
| Sequence | TGAATGAGTAGTTTAAGCATATGATAAACAATTTATGAAGAAAAGGACAATTTAGTTGCCCCCTACCTCATATATACAACCAGAACAACGTAAATATGTG TGCTGGCTCTTTTTGCCCTTTTTTTTATATTTGTTGAAAATGATAGCTATTCATCCGAAATAAACTAGCTTTTTATCTAAATAGTTAAAATTTCTTGATG GTACCAATAAAACTAGAACAACATAAATATTTGTATTTGTGCTGGCTGTTTTTCTCACCTCGTTTTCCATCAATATTACAACAACTTGAAACAAGACAAG GACTTAGTCAGTGTTGAAAATTTTACACTTCTGTTTCTGGCTTTAAAATCAATCGTTGGTCCCTTTCTTTTTCTGTATCAACAAATTTGCAAAACCAATT TTCTTTCTCAATGGGGGTTCATACTCAAACACTCTCTACCTTTGACCTTAACTCTAACCCTTCATTCCCATACTCCACCGTCAACGGCATTCACCGCCCA ACTTCCCCTCTCGCCAACGACCAGCCTCTTAAAACGTCAAATGTCGAATCGCCGGAGTGCCACGCGCCGTCACGCGCGTGGCATCAGGATACCGCTGCCG TCAGGGTGCAGAAGGTGTACCGCAGTTACCGTACCCGGCGGAGGTTGGCTGATTCCGCCGTCGTCGCCGAGGAGTTATGGTGGCAAGCGATAGATTTTGT GAGGCTAAACCGTAGCACCATTTCCTTCTTCAATTTGCCGGAAACCGCTGCGTCACGCTGGGCTCGTGTTATACTCAACGCTTCCAAGGTGGGTAAGGGT TTGTCTGTTGACGCCAAAGCACAAAAGTTGGCTTTTCAACATTGGATTGAAGCTATTGATCCACGCCACCGCTACGGGCATAACCTGCATTACTACTATG AGGAATGGTGTAAAACGGATGCTGACGAACCATTCTTTTATTGGTTGGATTTAGGAAAAGGGAAAAATCTTGATCTTGAAAAATGCCCCCGATCAAAGCT CCGGAAACAATGCATTAAATATCTTGGACCTCAAGAGAGAGAACACTATGAATACATTGTCTGCGAGGGAAAAATTATCCACAAGTATTCAGGAGATGTT CTCCATACGAAGGAAGGTTCTGAAGATGCCAAGTGGATTTTTGTAATGAGCACCTCTAAGAAACTGTATGCTGGCAAGAAAAAGAAGGGATCATTCCATC ATTCTTCCTTTTTAGCTGGCGGAGCTACCTTAGCTGCTGGAAGGCTGGAGGCTGAACATGGGACTCTGAAGGTAAAATTAACTTCAGAAGTTGCATGATT AAATTTGGAAAAAGGCTTCTCTAAAGTGAGAGTAAGAGTGTATGTACCCATGATTTAACTTAAAGTGCAACATGACTATACCATACTGAAGTTTAATAGT GGATACATCCTTACTCACTTTAGAGGCAAGTTCATTTTAAAGGAGTCCTAGCCAGTAAATTGTTGTTGTAATGGTACCTAACTTTAGGTGTTCCTAATTC TACCAGCATTAATAGTCTCAGAGATAGTGGGCTTCTGTCTTTTAGTGGATATGTGGTTACGCGGATTAAATGATATTGTTAGACATATTTTCTAATTCCA ATTTATATGTATTGACAAATGTTTGATTCTCGATGGCTTTGATTTTTCAGTCCATCTCTGCATATAGTGGACACTACCGGCCATCAGACGACTCTCTTGA CAGTTTCTTATCATATCTCAAGGAAAATGGTGTCCAGCTTGATGAAGTTGAGGTAAACTGGTTACTAATGGTTAGCATCAGGACATTTCATATGCAGAAT AACTCTTGTTATTATATTTCTCTGTCAACCTTGTTTCTAGAACAATTTTATGCCAAAATATGTTTCTTTTTCTTGAAGATCTTGATACTTTATGAATTGA TTGGTTGCCTCTGTTGTTGATTCAATCTTTATTATAATAATTTATTTGCTTCACTTAAAAGTTTGGTCTTGCATTTCCAAATGATGTTTATGGTCATAGG CTCATAGCTGGAAGCCTGGAACATGTAATATTCAATTGAAATAACCCTGATTTTTCAGATATGCAACACAAAAGATGACACTGATATGTATGAGAATGGA AAGCTTACTGAAAAAGATACAGCATCTGAAGTGTCAATGACTGCTAAAATGTCCGAGTCTGGATTATCCGAGGAAGCTGAGAATACCCCATCCTCAGACA AGGAAGATCTTCAACCTCGATCCGTTGGTTGTTATCAAAGGACACTATCAGGTGGTATTCCGAGCCCAAGAGCTGAGGTTCCCAAGACTGCTATATTGCA AAGAATAAATTCCAAGAAGGGTTCAAATTCGTACCAACTCGGGCATAACCTTTCCCGTAAATGGTCAACAGGAGCCGGACCGAGAATTGGGTGTGTTGCT GACTACCCTGTAGAGCTTAGACTACAGGCCTTGGAGATAGTAAACCTTTCTCCAAGGACCCATCCCTCCCCTTCATTGGACACGCGAATGAATGGTCTTA TATCACCTATAGCTTGTCCAACTCCCAAGGCTTCTGTTATTTGAACTACCTTACTGATCATTAGATCATGTTTCCTACCCAGTCTTGTGATGATTTAGGT TTTTTGAGTTGTAGGTGCTTTAGTTAATGTAATATTGTCCGTTCTCTATGTCATGTTAAATTTTTGGACTAGGTGTTATCTTATAAAAGACAATTGTACC TTATGCTTGTTTCCACAAATGCTAAGAGAACCTGAGAAGTGTTTGATGTGTGACTAATTATATTTCATGCCTTGTGCTAGATGGGTAAGCTTAAAATTGA GGTAGAGCTACTATTGTGTGGTTTGTGGCCGATGTAATTTGATATCACCACTGTCTTCCACACAGAAAGTGATAGCAATAAATGTTATTTTCAAAAGAGG CTGGTATATTCAGCAAGAAACAAAATATAAATGCAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_190740; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_429308
| Blastp | IQ domain-containing protein IQM3 from Arabidopsis with 65.96% of identity |
|---|---|
| Blastx | IQ domain-containing protein IQM3 from Arabidopsis with 64.49% of identity |
| Eggnog | NA(ENOG410XYBD) |
| Kegg | Link to kegg annotations (AT3G52870) |
| CantataDB | Link to cantataDB annotations (CNT0001147) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019417633.1) |
| Pfam | IQ calmodulin-binding motif (PF00612.26) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |