Ll_transcript_429309

• Id Trinity: TRINITY_DN52189_c4_g1_i3
• Name Transcript: Ll_transcript_429309
• Sequence: TGAATGAGTAGTTTAAGCATATGATAAACAATTTATGAAGAAAAGGACAATTTAGTTGCCCCCTACCTCATATATACAACCAGAACAACGTAAATATGTG TGCTGGCTCTTTTTGCCCTTTTTTTTATATTTGTTGAAAATGATAGCTATTCATCCGAAATAAACTAGCTTTTTATCTAAATAGTTAAAATTTCTTGATG GTACCAATAAAACTAGAACAACATAAATATTTGTATTTGTGCTGGCTGTTTTTCTCACCTCGTTTTCCATCAATATTACAACAACTTGAAACAAGACAAG GACTTAGTCAGTGTTGAAAATTTTACACTTCTGTTTCTGGCTTTAAAATCAATCGTTGGTCCCTTTCTTTTTCTGTATCAACAAATTTGCAAAACCAATT TTCTTTCTCAATGGGGGTTCATACTCAAACACTCTCTACCTTTGACCTTAACTCTAACCCTTCATTCCCATACTCCACCGTCAACGGCATTCACCGCCCA ACTTCCCCTCTCGCCAACGACCAGCCTCTTAAAACGTCAAATGTCGAATCGCCGGAGTGCCACGCGCCGTCACGCGCGTGGCATCAGGATACCGCTGCCG TCAGGGTGCAGAAGGTGTACCGCAGTTACCGTACCCGGCGGAGGTTGGCTGATTCCGCCGTCGTCGCCGAGGAGTTATGGTGGCAAGCGATAGATTTTGT GAGGCTAAACCGTAGCACCATTTCCTTCTTCAATTTGCCGGAAACCGCTGCGTCACGCTGGGCTCGTGTTATACTCAACGCTTCCAAGGTGGGTAAGGGT TTGTCTGTTGACGCCAAAGCACAAAAGTTGGCTTTTCAACATTGGATTGAAGCTATTGATCCACGCCACCGCTACGGGCATAACCTGCATTACTACTATG AGGAATGGTGTAAAACGGATGCTGACGAACCATTCTTTTATTGGTTGGATTTAGGAAAAGGGAAAAATCTTGATCTTGAAAAATGCCCCCGATCAAAGCT CCGGAAACAATGCATTAAATATCTTGGACCTCAAGAGAGAGAACACTATGAATACATTGTCTGCGAGGGAAAAATTATCCACAAGTATTCAGGAGATGTT CTCCATACGAAGGAAGGTTCTGAAGATGCCAAGTGGATTTTTGTAATGAGCACCTCTAAGAAACTGTATGCTGGCAAGAAAAAGAAGGGATCATTCCATC ATTCTTCCTTTTTAGCTGGCGGAGCTACCTTAGCTGCTGGAAGGCTGGAGGCTGAACATGGGACTCTGAAGTCCATCTCTGCATATAGTGGACACTACCG GCCATCAGACGACTCTCTTGACAGTTTCTTATCATATCTCAAGGAAAATGGTGTCCAGCTTGATGAAGTTGAGATATGCAACACAAAAGATGACACTGAT ATGTATGAGAATGGAAAGCTTACTGAAAAAGATACAGCATCTGAAGTGTCAATGACTGCTAAAATGTCCGAGTCTGGATTATCCGAGGAAGCTGAGAATA CCCCATCCTCAGACAAGGAAGATCTTCAACCTCGATCCGTTGGTTGTTATCAAAGGACACTATCAGGTGGTATTCCGAGCCCAAGAGCTGAGGTTCCCAA GACTGCTATATTGCAAAGAATAAATTCCAAGAAGGGTTCAAATTCGTACCAACTCGGGCATAACCTTTCCCGTAAATGGTCAACAGGAGCCGGACCGAGA ATTGGGTGTGTTGCTGACTACCCTGTAGAGCTTAGACTACAGGCCTTGGAGATAGTAAACCTTTCTCCAAGGACCCATCCCTCCCCTTCATTGGACACGC GAATGAATGGTCTTATATCACCTATAGCTTGTCCAACTCCCAAGGCTTCTGTTATTTGAACTACCTTACTGATCATTAGATCATGTTTCCTACCCAGTCT TGTGATGATTTAGGTTTTTTGAGTTGTAGGTGCTTTAGTTAATGTAATATTGTCCGTTCTCTATGTCATGTTAAATTTTTGGACTAGGTGTTATCTTATA AAAGACAATTGTACCTTATGCTTGTTTCCACAAATGCTAAGAGAACCTGAGAAGTGTTTGATGTGTGACTAATTATATTTCATGCCTTGTGCTAGATGGG TAAGCTTAAAATTGAGGTAGAGCTACTATTGTGTGGTTTGTGGCCGATGTAATTTGATATCACCACTGTCTTCCACACAGAAAGTGATAGCAATAAATGT TATTTTCAAAAGAGGCTGGTATATTCAGCAAGAAACAAAATATAAATGCAG
• Tissue: pods
• Gene name: LI_gene_190740;
• Additional information: details;

Expression of Ll_transcript_429309

FPKM

• PAB: 3.2
• PNAB: 41.4
• PS1: 63.2
• PS2: 11.6
• PS3: 17.7
• PW1: 45.3
• PW2: 10.6
• PW3: 4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_429309

• Blastp: IQ domain-containing protein IQM3 from Arabidopsis with 60.52% of identity
• Blastx: IQ domain-containing protein IQM3 from Arabidopsis with 60.52% of identity
• Eggnog: NA(ENOG410XYBD)
• Kegg: Link to kegg annotations (AT3G52870)
• CantataDB: Link to cantataDB annotations (CNT0001147)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417633.1)
• Pfam: IQ calmodulin-binding motif (PF00612.26)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;