Ll_transcript_431662

• Id Trinity: TRINITY_DN52190_c3_g1_i10
• Name Transcript: Ll_transcript_431662
• Sequence: ATTGAAGTTAAAATGAAATTGAAAAGCACGATCGTTAAAATCTATAAACGGAAACCCTAGTCTTATAAATACCCTCCAAACTCTTCTTCTTACTTCTCAA TTCTCATTTATCTATCACTCTCTCTCAAAACGCATCGTTTCGGGTTTTGATTTCTCATACCTTGATCAGAGATGGATCTTCCGAATCTCTCTCTTATACT CCAAGCTGCTCTTAGTCCAAATCCCGATCAACGCAAGGCAGCTGAACTTAGCTTGAATCAGTTCCAGTATGCACCTCAGCATCTGGTGAGGCTGTTGCAA ATCATTGTAGATAATAACTGTGACATGGGGTTGCGACAAGTAGCTAGTATCCATTTCAAGAACTTCATTGCAAAATATTGGTCTCCATATGAGTTTGATC CCCAGCAGAAGATCTCTCAGAGTGATAAAGACGTGGTGAGGGATCACATTCTTGTGTTTGTAACTCAAGTTCCTCCTTTGTTGAGGGTACAACTTGGCGA GTCCCTAAAAACAATTATACATTCTGATTACCCTGAGCAGTGGCCTCATCTTCTTGACTGGGTGAAGCATAACTTACAGGATCAACAAGTCTTTGGTGCA TTATTCGTGCTTCGGATTCTTTCGAGAAAATATGAGTTCAAGTCAGACGAGGAGAGGACACCGGTTTATCACATTGTTGAGGAGACATTCCCTCACCTTC TCAACATATTTAACAAGCTTGTCAAGATTGTTACTCCATCACTTGAAGTAGCAGATTTAATCAAGATTATCTGTAAAATATTCTGGTCCTCTATATATCT GGAGATTCCGAAGCAGCTGTTAGATCAAAATATTTTCAATGCATGGATGATGCTATTTTTTAATGAATTGGAGAGGTCTATCCCCTTGGAAGGTCAGCCT GTTGATCCCGAGCTTCGAAAATCATGGGGTTGGTGGAAGGTCAAGAAATGGACTATTCACATTCTAAATAGGCTCTACACTCGTTTTGGAGACTTGAAGC TGCAAAACCCTGAAAACAGAGTTTTTGCTCAAATGTTTCAGAAGCATTATGCTGGGAAGATTTTGGAGTGCCACTTACATTTGTTAAATGTTATTCGTGT TGGTGGCTATTTACCTGACAGGGTTATCAACCTGATTCTTCAATATCTAAGTAACAGTATTTCAAGGAATAGCATGTATGCTCTGCTGCAACCTCGACTT GATTTCCTTCTTTTTGAAATAGTTTTCCCCCTCATGTGCTTCAATGATAATGATCAAAAGCTTTGGGATGAAGATCCACATGAATATGTAAGGAAAGGCT ATGACATTATTGAAGACTTGTACAGTCCTAGAACTGCCTCCATGGATTTTGTGAGTGAGCTGGTTCGAAAACGTGGGAAAGATAATCTTCATAAGTTTAT TCAATTCATAGTTGAAATTTTCAAAAGGTATGATGAAGCACCTGCAGAATACAAGCCCTACAGACAGAAAGATGGTGCACTTCTTGCTATTGGCACACTT TGTGACAAATTGAAGCGAACTGAGCCATACAAATCTGAACTTGAGCGTATGTTAGTGCAACATGTCTTTCCTGAGTTCAGCAGTCCTGTTGGCCACCTTA GGGCCAAGGCTGCATGGGTTGCAGGACAGTATGCTCACATTAACTTCTCGGATATGAACAATTTCCGGAAGTCACTGCAGTGTGTTGTATCTGGAATGCG AGATCCTGAACTTCCCGTACGTGTTGATTCTGTTTTTGGTCTGCGCTCTTTTGTTGAAGCTTGCAAAGATTTGAATGAAATTCGCCCCATGCTCCCTCAA CTCCTTGATGAGTTTTTCAAGCTTATGCATGAGGTTGAGAACGAGGACCTTGTTTTTACTTTGGAGACTATTGTGGACAAATTTGGGGAAGAAATGGCAC CATATGCACTTGGGTTGTGCCAAAATTTGGCAGCTGCATTTTGGAGGTGTATAAACACTGCTGAAGCTGATGATGATGCTGATGATCCTGGTGCCCTGGC TGCAGTTGGTTGTTTGCGTGCTATTAGCACAATACTTGAATCAGTGAGCAGTCTTCCCCAACTCTATGTTAATATCGAGCCAACCTTGCTTCCCATAATG CGTCGAATGTTGACTACCGATGGTCAAGAGGTTTTTGAAGAAATTTTGGAGATTATATCATACATGACTTTTTTCTCTCCAACAATATCATTGGATATGT GGAGTCTTTGGCCTTTGATGATGGAAGCACTAGCAGATTGGGCAATCGATTTCTTTCCAAATATTCTGGTTCCTTTGGACAATTTTATTTCAAGAGGAAC TGCCCATTTCCTTACTTGCAAAGAGCCTGACTATCAACAGAGTCTATGGAATATGATTTCTTCTACGCTAGCGGACAAAAATTTGGAGGACAGTGATATC GACCCAGCTCCAAAGCTTATTGAAGTTGTCTTCCAGAACTGCAGAGGGCAGGTGGATCAATGGGTTGAGCCATATCTCAGGATTACAATTGAATGCTTGC ATCGAACTGAAAGATCATATTTGAAATGTCTTCTCATGCAAGTGATTGCAGATGCTTTATACTACAATCCTGCACTGACTCTGAGCATACTGCAAAAGTT AGGAGTTGCAGAGGATATCTTCAATCTTTGGTTCAGTATGCTGCAAGAAGTTAAGAAAAGTGGTGTGCGTGCTAATTTTAAAAGGGAACATGATAAGAAA GTTTGCTGCCTTGGTTTAACATCGTTATTGGCCCTTCCAGCTGATCAATTGCCAGTGGAGGCGTTAGGCCGAGTGTTCCGGGCCACTCTTGATCTTCTAG TTGCATACAAGGATCAAACTGCAGAAACTGCAAAAGAGGAAGAAGCAGAAGATGATGATGATATGGATGGCTTTCTAACTGATGATGATGATGAGGAGGA GGAGAATGGTTCAGACAAAGAAATGGGAGTTGATGCTGAGGATGGAGATGAAGCTGATAGTAATAAATTTAGAAAGTTGGCTGAACAGGCAAAATCGTTC AGGCCTGATGATGAGGATGATGATTACTCAGATGATGACTTTAGTGACGATGAAGAGTTGCAGTCCCCAATTGATGACGTGGATCCTTTTATTTTCTTTG TGGATGCGATGAAAGTGTTGCAATCATCAGACCCATTAAGGTTTCAGAACCTCAGCCAGACACTTGAGTTCTCTTATCAAGCTATTGCTAATGGTGTTGC CCAGCATGCTGAGGTGAGAAGAGTAGAGATTGAAAAGGAAAAACTGGAGAAGGCATCAGCTGTTGCAAATTCTTAAGCTTTTGGATGCAAATGCTTGGGT GTTTTCTTATTTTGTTCCTCAAGTTCTTACCTCTTTATCCATCATTGGTAAGAGAAGCAGCAGGTTGCTTATTTATTTGAGGCATTTGTTGGCTCATTGG TCCTATAGTTGGACTAAGAGCTTTGAAGAGTTTACAATTTTGCAGTACTGAGTTCAGTGGACTCAAGCTCACAACGATGTCAGAGGAAGCTGGATTCAGG AAACTCTGGTTTCTCCAACCATGGTTGAGAATTTTATATTATTGTTCGGTCTCCATGTTATGTTTTTGAGTCAGGTTTCATCCTTTTCCAATATACATAA ACCCTTTGATGTGTTCAGAAATGGTTTCATGTGTACATGTCCTGTCACATAGACGGGTAAATCAGGGTCCCCAATAATTGTATTATTGATAATTTATGGT TTTGTGACCTTATTTTTTTGGTATAATAATTTTTGAGAGTATAGTTCCGAGTTTTGGTGTATTCGAGTGTGGCTTATTGCAAACGTTGTACAACAGTCGT CTCCATTCTTTATATAAATATGGTGGGAAGAATAAGGTGAATTGTTG
• Tissue: pods
• Gene name: LI_gene_190761;
• Additional information: details;

Expression of Ll_transcript_431662

FPKM

• PAB: 0.7
• PNAB: 1.9
• PS1: 0.7
• PS2: 0.3
• PS3: 0
• PW1: 2.5
• PW2: 3
• PW3: 4.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_431662

• Blastp: Importin beta-like SAD2 from Arabidopsis with 75.6% of identity
• Blastx: Importin beta-like SAD2 from Arabidopsis with 75.12% of identity
• Eggnog: Importin(COG5656)
• Kegg: Link to kegg annotations (AT2G31660)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428158.1)
• Pfam: Importin-beta N-terminal domain (PF03810.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;