Id Trinity | TRINITY_DN52190_c3_g1_i12 |
---|---|
Name Transcript | Ll_transcript_431665 |
Sequence | AAAAACAAGAAAAGCGAAGAACCCCATAAGAGGGTGGGTGATTTAAATACCCCCAACGTTGCCAAATTCTTTGCATCTTCTAAACCCTAGTCTTGCTCCT CCTTGTTCTTTGCAACAGTTTCCAAGCTGCGGATAGGGTTTAGAATTGGGATTCAGTGATGGATCTTCCAAGTCTCGCTCTCATTCTCCAAGCTGCTCTT AGTCCCAATCCCGATCAACGCAAAGCTGCTGAGCAAAGCTTGGATCAGATCCAGTATGCGCCTCAGCATCTGGTGCGGCTGTTACAGATCGTCGTCGATA ACAACTGCGACATGGCAGTGAGACAAGTTGCTAGCATTCATTTCAAGAACTTCATAGCCAAGAATTGGTCTCCTCATGATCCTGATGCTCAACAACACAC GATCTCCCCTGCTGATAAAGACATTGTCAGGGATCACATCCTCATGTTCGTGGCTCAAGTTCCTCCTCTGCTGAGGGTACAACTTGGTGAATGCCTGAAA ACCATTATACATTCTGATTACCCAGAGCAGTGTCCTCGTCTTCTTGATTGGGTCAAGCACAATTTACAGGACCAACAAGTCTATGCAGCCTTATTTGTGC TGCGCATTCTTTCTAGAAAATATGAGTTCAAGTCAGATGAGGAGAGAACACCAGCTTATCACATTGTTGACGAGACATTTCCTCACCTTCTCAATATATT TAGCAAGCTGGTCCATGTTGAGAATCCATCAATTGAAGTAGCAGAATTAGTCAAGCTTATCTGTAAAATATTCTGGTCCTCTATATATCTGGAGATTCCG AAGCAGCTGTTAGATCAAAATATTTTCAATGCATGGATGATGCTATTTTTTAATGAATTGGAGAGGTCTATCCCCTTGGAAGGTCAGCCTGTTGATCCCG AGCTTCGAAAATCATGGGGTTGGTGGAAGGTCAAGAAATGGACTATTCACATTCTAAATAGGCTCTACACTCGTTTTGGAGACTTGAAGCTGCAAAACCC TGAAAACAGAGTTTTTGCTCAAATGTTTCAGAAGCATTATGCTGGGAAGATTTTGGAGTGCCACTTACATTTGTTAAATGTTATTCGTGTTGGTGGCTAT TTACCTGACAGGGTTATCAACCTGATTCTTCAATATCTAAGTAACAGTATTTCAAGGAATAGCATGTATGCTCTGCTGCAACCTCGACTTGATTTCCTTC TTTTTGAAATAGTTTTCCCCCTCATGTGCTTCAATGATAATGATCAAAAGCTTTGGGATGAAGATCCACATGAATATGTAAGGAAAGGCTATGACATTAT TGAAGACTTGTACAGTCCTAGAACTGCCTCCATGGATTTTGTGAGTGAGCTGGTTCGAAAACGTGGGAAAGATAATCTTCATAAGTTTATTCAATTCATA GTTGAAATTTTCAAAAGGTATGATGAAGCACCTGCAGAATACAAGCCCTACAGACAGAAAGATGGTGCACTTCTTGCTATTGGCACACTTTGTGACAAAT TGAAGCGAACTGAGCCATACAAATCTGAACTTGAGCGTATGTTAGTGCAACATGTCTTTCCTGAGTTCAGCAGTCCTGTTGGCCACCTTAGGGCCAAGGC TGCATGGGTTGCAGGACAGTATGCTCACATTAACTTCTCGGATATGAACAATTTCCGGAAGTCACTGCAGTGTGTTGTATCTGGAATGCGAGATCCTGAA CTTCCCGTACGTGTTGATTCTGTTTTTGGTCTGCGCTCTTTTGTTGAAGCTTGCAAAGATTTGAATGAAATTCGCCCCATGCTCCCTCAACTCCTTGATG AGTTTTTCAAGCTTATGCATGAGGTTGAGAACGAGGACCTTGTTTTTACTTTGGAGACTATTGTGGACAAATTTGGGGAAGAAATGGCACCATATGCACT TGGGTTGTGCCAAAATTTGGCAGCTGCATTTTGGAGGTGTATAAACACTGCTGAAGCTGATGATGATGCTGATGATCCTGGTGCCCTGGCTGCAGTTGGT TGTTTGCGTGCTATTAGCACAATACTTGAATCAGTGAGCAGTCTTCCCCAACTCTATGTTAATATCGAGCCAACCTTGCTTCCCATAATGCGTCGAATGT TGACTACCGATGGTCAAGAGGTTTTTGAAGAAATTTTGGAGATTATATCATACATGACTTTTTTCTCTCCAACAATATCATTGGATATGTGGAGTCTTTG GCCTTTGATGATGGAAGCACTAGCAGATTGGGCAATCGATTTCTTTCCAAATATTCTGGTTCCTTTGGACAATTTTATTTCAAGAGGAACTGCCCATTTC CTTACTTGCAAAGAGCCTGACTATCAACAGAGTCTATGGAATATGATTTCTTCTACGCTAGCGGACAAAAATTTGGAGGACAGTGATATCGACCCAGCTC CAAAGCTTATTGAAGTTGTCTTCCAGAACTGCAGAGGGCAGGTGGATCAATGGGTTGAGCCATATCTCAGGATTACAATTGAATGCTTGCATCGAACTGA AAGATCATATTTGAAATGTCTTCTCATGCAAGTGATTGCAGATGCTTTATACTACAATCCTGCACTGACTCTGAGCATACTGCAAAAGTTAGGAGTTGCA GAGGATATCTTCAATCTTTGGTTCAGTATGCTGCAAGAAGTTAAGAAAAGTGGTGTGCGTGCTAATTTTAAAAGGGAACATGATAAGAAAGTTTGCTGCC TTGGTTTAACATCGTTATTGGCCCTTCCAGCTGATCAATTGCCAGTAGAGGCTTTAGGCCGGGTGTTCCGGGCCACTCTTGATCTTTTGGTTGCATACAA GGATCAAGTTGCAGAAAATGCAAAAGGGGAAGACGCAGAAGATGATGATGATATTGATGGTTTTCTAACTGATGATGACGAGGATGACGATGGTTCTGAC AAAGAAATGGGAGTCGATGCTGAGGATCATGATGAAGCTGATGCTAGTAAATTTAGAAAGTTGGCTGAACAGGTGTGTGGATATGACTGGGCCTACAAAC CATTTACATGCTTATATTAATTGAATATAAGATAATGAATTGATCATTAATTGAATATAAGATAACGAATTGATCATTTTGCTTGCAATAAAGGAATTTT GTAGTATGTGTGTACGAGCTTTTTAATATACGAAATTCAAGCAGTTCACAATTAGCTGACTTCATTATCCGGCTCCTAGTTTTATTTGATTATGAAAACC AGGGTATTTAATTAGGCCATTATTGTTTTGGATACTATTCATGTGTAGTGTAAATATTAAACTCTTGAAATATAAAATATTTTGTAACCTTTTAATCGTA ACGATTTGAATATAAAATATTAATCTGCATGCCATTTTTAGTGTATTAATTTTTAGACCCAGTGAGATATTTTTGTGATTAGTGTTACATCAGGTGCATA TCGCAATTCAGTTTAAGTATGAAATAGAAAAACTTTCATCACTTTAACCAAAGAAGTATGTCATCTTCATGGTTCCTCTGCTGGCAATGCACAGTGGTCG CATTTGTTTGGCTGTTTTCGGTTCAATTGACATCCATAAGTTGCTTATCCAATCCGGTAAGCCCATCCAGCTTGGCAGTTTTGTGGTTGAAGGGGCTGGT CTACTTTATTGCTCCTTTTTATCTGATTGCTTCAAATTTATATTTTCTGATATTGTTTTTTTATCTTTCTTTCAC BLAST |
Tissue | pods |
Gene name | LI_gene_190761; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_431665
Blastp | Importin beta-like SAD2 from Arabidopsis with 74.97% of identity |
---|---|
Blastx | Importin beta-like SAD2 from Arabidopsis with 74.97% of identity |
Eggnog | Importin(COG5656) |
Kegg | Link to kegg annotations (AT2G31660) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019428158.1) |
Pfam | Importin-beta N-terminal domain (PF03810.18) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |