Ll_transcript_429543

• Id Trinity: TRINITY_DN52194_c3_g1_i11
• Name Transcript: Ll_transcript_429543
• Sequence: TAAATCGTTATTATGTTTTTTTTCTGTACATAGAATAATAAAAAAAGTGCAGTAGACAATAGTATAAATGTGTTTTATTTAAAAATCATACACATTTGTT GTAGGTTGACAAAGTAAAAAACTTTAAACTATCATTGCACAACCATTGAACTGAGATAATATTTGTTTAATGTTTACAATGATTTTTCTTCTTTTGACTG AAATCAAAGTTATCTCATGTGCATATTGTATAGCAGATCTCATCATTCAGAGAGAGCAAGTCAGATGATAGGAAGTTCTACATATTTACATCAACAAAAA CTCTTCATCTGAGAACAGATTCAAGGAAAGACCGTGTGGCTTGGATTCAAGCTTTGGTGTTAACTCGTGGCTTGTATGCACTTCAACCACTTAATGATCA TATTTCACTTGCATCAAATCACATATCTGTATCAACTGAGAGGCTTAAAAAGCGCTTGCTTGAAGAGGGTACCAGTGAGAATCTTGTAAAAGAGTGTGAG CAAATCATGCTCACTGAGTTCTCTGATTTACAAGGACAGCTTAAAATCTTATTTCAAGAACGAACAAATTTGCTTGATACAATAAGGCAGTTGGAGGCAG CTAATGTTGAAGCTGAGGCATCTGCCATACATGACAGTGAATACCAATTAACCAAGAATGTATTATCAAGGCTAGAACGTGGAAAATTTAGTGAATGCAG TACAACTGAATCATCCGACGATATTGAAAAACAGGAGCTAGAGGAGGTCTCAGATGAAGATGAAAACATATATTATGATACTAGAGAGGATTTTACAGAA CCTGGTTTTGAAGGTGGGTCAATAGGAGCTCTGGATCAGGTGAACAAGTCTGCAGAAGCTAACACACAATGCAATAATATGGAGAACAATTATGGGTATC CTCAGATAGCAAGAAGAAGAAAGCTTCCGGATCCCGTCGAGAAAGAGAAGGGTGTTAGTCTTTGGTCGATGATCAAAGACAATGTGGGCAAAGATCTCAC ACGAGTTTGTCTTCCTGTATACTTTAACGAGCCAATATCATCTCTTCAAAAATGTTTCGAGGACTTGGAGTACTCTTATCTTCTGGATCGAGCTTATGAA TATGGAAAATCAGGAAATAGTCTCCTTCGGGCTCTGAATGTTGCTGCCTTCGCAGTTTCTGGATATGCATCATCGGAAGGTCGTCACTGTAAACCCTTTA ACCCTCTGTTAGGGGAAACGTATGAAGCTGATTACCCTGACAAAGGACTTCGCTTCTTTTCTGAGAAGGTCAGTCACCATCCAACTGTGATTGCATGCCA CTGCGAAGGTAAAGGATGGAAGTTTTGGGCTGACAGTAACATCCGTTCAAAGTTTTGGGGAAGGTCAATTCAACTTGACCCAGTTGGAGTTCTGACCCTA GAGTTTGATGATGGTGAAATATTCCAGTGGAGCAAGGTCACAACAACAATTTACAATCTTATCCTTGGTAAAATATATTGTGATCATCATGGAAACATGG ACATACGTGGTAATCGCCAACATTCATGCAAACTCAAGTTTAAAGAGCAGTCAATTCTTGACCGAAATCCTCACCAGGTACAAGGGTTTGTTGAAGACGT TATGGGACAAAAGGTTGCCACATTAGTTGGCAAGTGGGATGATAGCTTGTATTATGTTAATGGTGATTTCAATGTGAAGCCAAAAGATTTCACTTTGTCA GAAGCACCATTGTTGTGGAAAAGGACTAAGCCACCAATTAATCTCACTAGGTACAATTTGACATCATTTGCCATCACACTGAATGAACTTACCCCAGGAT TGAA
• Tissue: pods
• Gene name: LI_gene_190793;
• Additional information: details;

Expression of Ll_transcript_429543

FPKM

• PAB: 0.6
• PNAB: 5
• PS1: 0
• PS2: 1.5
• PS3: 0.8
• PW1: 4
• PW2: 2.7
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_429543

• Blastp: Oxysterol-binding protein-related protein 2A from Arabidopsis with 73.21% of identity
• Blastx: Oxysterol-binding protein-related protein 2A from Arabidopsis with 71.89% of identity
• Eggnog: Oxysterol-binding protein(ENOG410XP9E)
• Kegg: Link to kegg annotations (AT4G22540)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446698.1)
• Pfam: Oxysterol-binding protein (PF01237.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;