Id Trinity | TRINITY_DN52197_c0_g1_i4 |
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Name Transcript | Ll_transcript_431054 |
Sequence | ACAAAATCACTGTACTTCAATGAGTTTTGCAACTTCTTTGTTTATTGATTGTTATTCGTGTTTCTTCCTTATATTTTATTTTCACAGAAAGAAGAATTGC ATTGTATCTCAGTGCAATTGGGCAAAAGTTCCTATCTATATACCGCTCATGTGGCACCTACATTGCTTTCCTGACTATTCTTCTCACGGTATACATGGTG AGACCCAATCACATATCATTTGGTTACCTATCACTTCTCCTACTGTGGATTACTGGAAGGCAACTTGTTGAGAGAACAAAAAGACAGCTTTGGCTTCCAT TGAAAGTGTATGCAATTTTGGTCTTTATCTTCATATATAGCTTGAGTAGCTTCTCAAGCCTTGAGATGTGGGCGTCCAAATTAATAGATCTGTATTTTTA TCTGGGATATGACCCAAACGCGTCTTCTTTTCAAAATGTTTGGGAGTCTCTGGCAGTCTTAATTGTCATGCAACTTTATAGCTATGAAAGAAGGCAGAGC AAGCAGGACAGGCAGGATTACTTGGATCAGTTGGAGCCAGGGGTATTTGGGTTTATCAGGCGATTTCTTATCTGGCACAGTCAGAAGATCTTGTTTATTG CTCTGTTTTATGCATCTTTGTCTCCAATTAGTGCATTTGGTCTCTTGTATCTGCTTGGCTTTGTCGTCTGCTCCATGTTACCAAAAACATCTAGTATCCC ATCCAAATCATTCTTAGCATACACGGGTTTTCTGGTGACTGCTGAGTATCTTTTCCAGATGTGGGGTATGCAGGCTGAAATGTTTCCTGGGCAAAAGTAC TCTGATATATCTCTGTTTTTGGGTTTTTGTGTATTCAAGCCAGGCTTTTGGGGTCTAGAGTCAGGGTTGAGGGGAAAAGTGCTAGTGATTGTTGCCTGTA CCCTTCAATACAATGTCTTCCGTTGGTTGGAAAGGATGCCAGATACAGTTATAAACAAAGGACCATCGGAAGAACCCTGCCCTCTGTTTGTTTCCATAGA AGATGCGTTCAATGATGTTACTACATGTAACGAAGAAAGCAAACCATCATGTAATTCACATCCACCATCTGTAATGCACGAAGGGGTGTCTCACAAGTCA TTGCGGATTTTAACCTCTGGTCTGTCTCAAACACTCGATACTCCATCCTCCAAAACAAGAGGTTCTGACAGCAGCAGTAGCAAGTATTCATTTGGGTTTA TCTGGGGAAGCACCAAGGAGAGTCACAAGTGGGACAAGAAACGGATTGTTTCTTTGAGAAAAGAACGATTTGAAATACAGAAATCAGTCCTAAAAATATA TTTGAAATTCTGGACCGAGAATATGTTTAATCTGTTTGGTCTTGAGATAAACATGATAGCATTACTACTGGCAAGCTTTGCCATCTTGAATGCAATATCT ATGCTGTATATTGCACTGCTTGCTGCTTGTATTCTTCTGAATCGGGAAATTATACGCAAAGTATGGCCCACATTTGTCTTTTTGTTTGCTTCTATTCTCA TCCTGGAATATTTTGTAATCTGGAAGGATATGTTACCTTTGAATTCCCACGTTCCAAGTGAGATTCATTGCCATGACTGCTGGAAAACTTCAACTCTGCA TTTTTATTATTGTGAAAAGTGCTGGTTTGGAATTACTGTTGATGATCCCCGGATGTTGATAAGCTACTTTGTGGTCTTCATGCTTGCTTGCTTCAAACTT CGTGCTGATCGCTTCTCTAGTTTTTCAGGATCATCAACATATCGTCAGATTGTGTCTCAACGTAGGAATACATTTGTTTGGAGAGATCTCTCTTTTGAAA CTAAAAGCATGTGGACTATTCTTGACTATTTGAGGCTTTACTGCTATTGCCATCTATTAGATCTTGTGCTGATATTAATATTGATTACTGGAACACTTGA GTATGACATTCTGCATCTTGGTTATCTTGCCTTTGCTCTGGTATTCTTTCGCATGAGACTTGAAATACTGAAGAAGAAAAACAAGATATTCAAGTTCTTG CGCATATATAACTTTGTGGTTGTTATTCTTTCTCTTGCTTATCAGTCTCCTTTTGTGGGGGGGTCAAGTTCTGGAAAATGTGAGACAGAGAATTATATTT ATGAGATTATTGGTTTTTATAAATATGATTATGGTTTTCGGATTACTGCAAGATCTGCAATTGTAGAGATTATCATTTTTGTGCTGGTATCACTTCAATC ATATATGTTTTCCTCTCAAGAGTTTGATTATGTATGTCGTTACCTCGAAGCAGAGCAAATTGGTGCTATTGTGCGTGAGCAGGAGAAAAAGGCTGCATGG AAAACTGCACAGTTACAACACATTCGTGAAAGTGAGGAGAAAAAACGACAGCGTAATATGCAGGTGGAGAAGATGAAATCTGAAATGCTCAACCTGCAAA TACAACTCCATAGCTTGAACGCATCCACTATTGATGGATTTTCTCACAGTGGTGAAGGTCTAAGAAGGAGGAGGAGCACTTCTCTTACACCAAATAATGA CATTGGAATCCTTGACAAAGAACTGGCTCTTGGGAAACTAGATCAAACAATAAGAGAGGATTCCATTTTTCCAATTGAAGTGCATGAATCGTCTGCTTGC TTGAATGTAGAAACTCCATTAGCAGAAGAGTATATGAATCATTCAGTGGATTCTCCTCTTTGTGAAATTACTGAAATAGATGATACTTCTAGTGATTCAG GAAAAAAAGATAAAGTTAGAGGGCAAGCCAAAGAGAACCCATTGAAATCTGCTGTACAATTAATAGGTGATGGTGTTTCCCAGGTACAGTCCATTGGAAA TCAGGCAGTCCATAACTTAGTGAGCTTTCTCAATATTTCACAAGAAGATTCTGATTCAAATGAGCACACAAACATTGATGATCAGATATATGACGAGATG GAAAGTCAAAAAACTCGGCATGTTTATATGGATCGTTCTTCATCTGTGCTGTCTGATAAAAGTTCTGATGCTGCAAGTTTGCAGTTAGGAAGGATCTTTC GTTATATATGGTACCAGATGCGTTCCAATAATGATGTTGTATGTTACTGTTTGTTTGTTCTTGTGTTCTTATGGAACTTCAGTTTGTTATCAATGGTGTA TCTCGGGGCTCTCTTCTTGTATGCTTTATGTGTAAATACAGGCCCAAGTTACATCTTCTGGATTATCATGCTAATCTATACAGAAGTTTATATTTTACTT CAGTATCTCTACCAAATTATCATCCAGCACTGTGGGTTGAGTATTGATCCATCCCTGTTACGAGAATTGGGTTTTCCATCACACAAAATCATGTCTTCAT TTTTTGTCAGTTCGTTACCTCTCTTTCTTCTCTATTTATTTACTCTCCTTCAAAGCTCCATTACGCCGAAAGATGGTGAGTGGGTGTCTTCTACAGACTT CAAGTTTAAGAGGAATGATGTCCACAGAAAAGATCACCCCACTAGTTATAACTGGCAAGAGAGAGCATGGAATCTGCTAAATCAGATGTCTAACATGGTC AAACTGATAATCAGGAGCTCTTTTAGATATTGGAAATCACTCACACAAGGAGCAGAATCTCCTCCTTATTTTGTCCAGGTGTCTATGGATGTCAACTTCT GGCCAGAGGACGGGATTCAACCAGAGAGGATTGAATCTGGAATCAATCAGTTGCTCAGAATAGTTCATAATGATAAATGCAAAGAAAAGAACCCAAATCT TTGCCCTTTTGCTAGTAAGGTAAATGTCCAAAGCATTGAAAGAAGTCAAGAGAGTTCCAATGTTGCCTTGGTTGTTTTTGAGGTCGTGTATGCCTCTCCT TTAGTTGAGTGTTCTTCGGCAGAATGGAATAAGTCCCTTACTCCAGCAGCTGATGTAGCCAAGGAAATCCTCAAAGCTCAGTCTGCAGATTTTGTGGAAG AAGTGGGATTTCCTTACCGTATACTTTCTGTAATTGGTGGAGGCAGGAGAGAAATTGATCTGTATGCCTACATATTTTGTGCAGATCTGATTGTATTCTT TCTTGTTGCCATCTTCTACCAGTCTGTCATAAAAAATAAAAGTGAGTTCCTTGAAGTTTATCAGCTTGAAGACCAGTTTCCAAAAGAATTTGTCTTTATT TTAATGGCTATTTTCTTCTTGATTGTGCTTGACCGTATAATATACCTTTGCTCATTTGCCAGTGGGAAAGTGATTTTCTATATTTTCAACCTCATTCTCT TCACATATTCAGTAACTGAGTATGATTGGCAAATGGACCCGTCCCAACAGAATGGAGCTCGGTTAGCTCTCCGTGCCATATTTCTTGCAAAAGCAGTTTC TCTAGCACTGCAGGCTTTACAAATGCGATATGGCATTCCTCACAAGAGTACATTGTATAGGCAGTTCTTGACCAGTGAAGTTTCTCGAATCAACTACTTG GGATATAGACTTTATCGTGCTCTGCCATTCCTTTATGAATTAAGATGTGTACTTGACTGGTCATGCACAACTACATCGCTCACCATGTATGACTGGCTAA AGGTAGGTTCTGTAAATATTCATTTCTAAAATCACTACCTATCATCCATAACATAAAATTTCCATCATTCTACTTTTTTTCCAATATGCATCTTGCCCTT TCTAATATTTGAATGTCTTTATCTTGCTTTGTTTGGAGGTTGAATTTAAGCATGATTGTGTATGTTTGCCTCAATTTGTCTTTGCACGTGTAACATGTAA TTTTCAGTTAGGTATTAATTGCTAGAGTTTTTGCTTTGTTTTCATTGTATTGTTTACTGCAACCTTTTCTGCCCTTGAATTTTGCATGATCTTCTTTCAT TTATTTTTCTGCTCTTAAGAACTAGTTGGAGAATACAAAGAGACTTATGGAAACTGTACTACCTTCACTACATATTGATTCATGTTTTATTGTTACAAAT CACTTAATTTAAAAATGGTTGCCTTGAATATATCATGATTTTATGACTAGC BLAST |
Tissue | pods |
Gene name | LI_gene_190814; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_431054
Blastp | Piezo-type mechanosensitive ion channel homolog from Arabidopsis with 68.89% of identity |
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Blastx | Piezo-type mechanosensitive ion channel homolog from Arabidopsis with 68.66% of identity |
Eggnog | Piezo-type mechanosensitive ion channel component(ENOG410YVF6) |
Kegg | Link to kegg annotations (AT2G48060) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019452652.1) |
Pfam | Piezo non-specific cation channel, R-Ras-binding domain (PF12166.7) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |