Id Trinity | TRINITY_DN52198_c0_g1_i15 |
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Name Transcript | Ll_transcript_430240 |
Sequence | CTCTTTTCCACAATGTCTTCTTCCTTCTCTGCCTCCAACAACCTGAGCGCAACCCTATCCACCACTCTCACTCACCACCGTCGTCCCACGCGCCCCTCTT CCATCAAATGTCTCTCTTCCAACGATTCTCATCAACACTCTCCTCACCTCACTTTCTTCAAAACCCTCTCCAAAACCATCGCTATCTCCTCCACCGCTGC ACTCCTCTTCCATTCCACCCCTCTCCGTGATTTTCCCACTCATTTCAGCCTCGGCGGCGGCAATAATGGCGCCACTGGAGGCGGCGGTGGCGGCGGAGGA AGTGGAGGTTGGTTCGGAGGTGGTGATGGCGGAAATGGAGGATTCTGGTCAAGACTATTCGCGCCGGCTTCGGCTATCGCTGATGAACCTCAATCTCAAG ATTGGGATTCTCATGGTTTGCCTGCTAACATTGTGGTTCAGCTTAACAAGCTTAGCGGTTTCAAGAAATACAAATTGACAGAGATTATGTTCTTCGATCG GAACCGAAGATCGAAGGTTAGTGCTGAGGATTCGTTCTTCGAAATGGTTTCGCTGCGCCCTGGTGGTGTTTACACCAAGGCGCAGCTTCAGAAGGAGCTA GAAACTCTAGCTACTTGTGGAATGTTCGAGAAGGTTGATTTGGAAGGGAAAACCAATGCTGATGGAACAATTGGTGTTACTATTAACTTCAGTGAGAGTA CTTGGCAACAAGCTGATACATTTCGCTGTATCAATGTTGGTTTGATGCAGCAAACAAAGCCTGTTGAGATGGACTCCGATATGACCGATAAGGAGATGCT CGAGTACTATAGGAGTCAGGAGAGGGATTACAAGAAGAGAATTGAGAGGGCCAGGCCTTGCCATTTGCCCGAATCCGTGCACAGTGAGATTATGCAGATG CTAAATGAACAAGGCGCGGTTAGCGCGAGGTTGTTGCAGAGGATAAGGGATAGGGTGCAGAAATGGTACCATGACGCTGGGTATGCGTGCGCGCAGGTGG TTAATTTCGGGAATCTTAATACTAAGGAGGTTGTGTGTGAGGTTGTGGAAGGGGATATCACTCAATTGGTCATTCAGTTCCAGGACAAGCTTGGTAATGT TGTTGAAGGTAACACTGAAGTTCCAGTGGTAAAGAGAGAGCTTCCTAGACAGCTTCGTCCAGGTTACACTTTTAACATTGAAGCCGGGAAACAAGCTTTA AGAAACATAAATTCCCTTGCTTTGTTTTCGAATATTGAGGTGAATCCACGACCTGATGAGAAGAACGAGGGAGGCATAATTGTTGAAATTAAGCTAAAAG AGTTGGATCAGAAGACAGCTGAAGTCAGTACCGAGTGGAGTATTGTTCCTGGGAGAGGAGGGCGTCCCACTTTGGCTTCAATTCAGCCTGGTGGAACTGT TACTTTCGAACACCGGAATCTGTACGGACTGAATAGATCCGTTAATGGTTCCATAACAACTAGCAACTTCCTCAATCCTCAGGATGATCTTGCATTTAAG CTGGAGTATGTGCATCCATATCTGGATGGTGTAACTGACCGCAGCAACCGTACTCTCCGTGTAAGCTGCTTCAATAACCGGAAGCTGAGTCCTGTATTCA CTGGAGGCCCAGGGCTTGATGAAGTTCCCCCAATATGGGTTGATCGTGCTGGCGTTAAAGCTAATATTACAGAGAATTTTACACGCCAGAGTAAATTCAC TTATGGACTCGTGATGGAAGAGATAACAACTCGTGATGAAAGTAGTCATATCTGCACAAATGGTCAAAGAATATTACCTAGTGGAGGAATTAGTGCTGAT GGACCTCCAACCACCCTCAGCGGCACTGGCATTGATCGCGTGGCCTTTCTTCAGGCAAATATTACTCGCGATAACACGCGTTTTGTGAATGGAGCTGTAG TTGGTGAAAGAAATGTGTTCCAGGTGACTACCTCATTCTACACTCATTGACTTTGGAACTGTCCACGTGGATGTGTCATACATTTTTTATAATATTTGTA GGTTTTCGAAATAGTGAGCAAGAAATTCATTTTAAAATTTAAAAAAATAGAACATGCTCTCAGCAAATGTTTTGCGAATAGTTCAAAGCTTTAGATGGGG GAAAGAGGAGGTTCTGAAGTAGACAAAATGTGCATTAAGCAGGGTAGAGCCTGTTATTTCCATGCAGATGTTGTAGCCTGCATAAATGTTTGCCAAGAAC TTTTAGATTGCATGTTGTTTCCTGTATAAATATGAGTTGGCCTTCACATATTTTTTTACTTTGACCTTTCAAACTCCTCACATTGACACATGCTTGTGGA AACATAGAGCCCATGAATATAATAAAGAGGCTTGGTTGTTGTTGGAAATGTTTTCTATTTCCATTCTCGGTACATCCTCTCAATTTTCATTTCCTGAAAA TATTTCTATTTTCAGTTGTCATCTTTTTTGAAAACATGTTTGATTTGTTATTTTTGTTATCTATTTTCAATACCCATGTTGTACACCTTAAAAAATCCGA GTCCATGACAAAGTGGCTCGTGTCAAAACCTGATTCCAAATTTCTCATCAAGATTCTATGCCTGTACAAATCAAACAACTTTGAACCGAGTGCAATTCAT TAGATAGCATCAAGATATGATCCTACATCAATCCCAGCCTTGTGACCATACAGCATGCCCTCCACCATCCCACAATTTTCAACTCTTAACCACACCCTAT GGCTGAGATGTTTTCTCCTTCTTCCAAGACTCTGTACACGCCTCACTAGTGGATGGGTTGCGAAGACGATATAAGATGATAGGATTCACAGTCAAAAAGA TGAAGAGCCAGAACAGAGTGAAATAGGGGGATAAAGGAAAAACCAAAGTCATGAAAATTTTAAAAATGTCATCACAATGATGGAAACTGGAAACACTGGA AAAAAATTGTTTTCAGAATTGCCGGAAATGTGAAGTTCATTTTGAAGGTGAAAATGAATACCTATTCAAAACTGTGCAAAATTCCCGAAGTTAAAATATG TGCACAGGTTAAAGGACACTTATTAGTTTTTATTGATTATCTATCTTCAGTTTTATGTTATGTTTAATTGTTGTTTATTATATGTTTGCTAAAGTGCCGG CTATCCTTTTTTCGTCGGTCCTCAAGAAGGGGCATATAAAAACCCAACCACAAGGATTGAAGTAGCGGGGATGGGTTATATCATTGGATTCATTATGGTA TTTCTTATTGAATTAGCATTATCTTTGAGGACAATATATTGTTTTCTATATTTCTAGTCTTGAACTAAGCTATGCCTGTGTTTTCTGCTGACATAATTTT CATATATGTGAACTGCAGGTTGATCAAGGCCTTGGCCTTGGCAGCCAGTTCCCCTTCTTTAACCGTCACCAGCTAACTTTGACTAGATTTCTCCAATTGA TGAAAGTTGAGGAAGGTGCCGGTAAATCACCGCCACCAGTGCTTGTCCTCCACGGCCATTATGGTGGTTGTGTAGGTGATCTTCCAAGTTATGATGCTTT TACTCTTGGTGGACCCTATTCTGTAAGGGGTTACAACATGGGTGAGATTGGAGCAGCCAGAAACATCCTTGAGGTAGGAATGATTGGATGATTTTATAAT GAGTATAATATCTATGCACTGTCAGTGTAAAGATTTATACACAGACAGTATATGATCCACCATTCATTTGTATTACTTTCTTTGAAGAGTCGATAATGAT TAAAATTCTTTGTGGACGTTTTGTTTTAGTACATTTTTTAATCTATAAGAGGGTGGGCCTTAGCGCAACAGTAGGGTTGCTGCCTTATAACCTGGAGGTT ACGAGTTCAAGTTGTAGAAACTGTCTCTCTGCCTGTCGGATTCGACTAGGCACTAGGTCACCCTTTTAAATTCTTATAATCTACATGCTATCCAGTATCC AATACTATGGGATCAACTATCCGAATTATTTTTCTTTTTTCTTTCTACAGCTTGCAGCTGAATTAAGGATACCTATCAAAGGTACACACGTGTATGGGTT TGCAGAACACGGCAATGATCTAGGGAGTTCAAAGAGTCTCAAGGGGAATCCGACAGAAGTCTATAGGCGACTTGGTCATGGATCATCTTATGGTGTTGGT CTCAAGCTTGGTTTAGTCAGAGCAGAATATGCCATTGATCATAACTCAGGAACTGGTGCACTATTTTTCCGTTTTGGAGAGAGGTTTTGAGGTGCAAAAT GGCGGCACAATATCTTGCAGCAAATGGTTGCTCTTAAAACTATATGTCTCGGGCTGGTGCTGGACTTGTAGACTTGGTTTTTTGTCATCTACCCTTAAAA TTGGAATAGGTTTCAGTGAAAATATTAACATGGCAGTTTATGTTGAGGTGTTCTATTGAATGGTTTAAGTTTGTTTTGCGGCTATTGATCATTGCCTGCC TGATAGGACAAATGAAACCTTATAATATTAGTGGTTATAATAGTGATCTTTTGTATTATTTCTCTTTGATTTTTAGTACAAGTTGGTTTTTCTTATTAAA AGATAACACTTGTAAAAATCATAGCTTAAAAAAGTTGGTTTTCCTTTTTCCTATAATGTGAAACAGG BLAST |
Tissue | pods |
Gene name | LI_gene_190824; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_430240
Blastp | Protein TOC75-3, chloroplastic from Arabidopsis with 84.82% of identity |
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Blastx | Protein TOC75-3, chloroplastic from Arabidopsis with 84.82% of identity |
Eggnog | Gram-negative-bacterium-type cell outer membrane assembly(COG4775) |
Kegg | Link to kegg annotations (AT3G46740) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019458364.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |