Ll_transcript_305589

• Id Trinity: TRINITY_DN52201_c0_g1_i3
• Name Transcript: Ll_transcript_305589
• Sequence: CTCTCTCTCTCTCACTCACTCACTTTCTCACTCTTCACACACTCTCTCCTCAGTTCCAAAACTAGTCACAAGGTGCCACCCCATCTGCCAGGGCTTCTTA ATTATTTCATAGCTTCTGCAACTTCAATTCAGTTGTACTAATGGAATCTTGGAGCTATGTTGAAGAAGGGAAAGGGTATTTGTTTTCTGATGAAATGGAT TTTTCACTTGATGCTTTTATGAGAAGTAGAAAAGCATTGGTTGAATGGGACAACAAAGGGTCATGTAACTTTGAGGGAGATGGATTTGCTTCAGACAGAG AGGTAGTTTTGGAATTTGTTGCAAAAGAAGGAATTCATCCTAAAGAAGGACAACAAAGCATGGAATTTGTGGACTTGGGATTTCCCGACTTGTTCCGAAA GTCCTTTAATAGCGGCCATGCTCATGAGATATCTAGCTGTGAATTAGATAGTAATTCTAGTAAAAGAGGGAATTCATCCACCCATGTTATTGCCTTGGTT TCGTCTTTGGGGGAAGAAGTATCCGAATCAAAGCATTTAAGTTCTCTAGTTGAATCGAAAACTGACGGCTCTTCACTGATTGATTTGAAGCTAGGGAGGT TAGCAGAGTGCCAAGGTTCAAGCAATGATGAAATTACAGAAGGGTTTACTTTATCATCTATACATCCAACCGTGTTCACAAAGAGAGCTCGCACCTCAAG CTCGCCTATTTTGGCTCCGGTATGTCAAGTTTATGGTTGTAACATGGATCTTAGCTCCTCAAAAGAGTACCACAAAAGGCATAAAGTTTGTGATGTTCAC TCTAAGACAGCTAAAGTCATTGTTAATGGCATTGAACAGAGGTTTTGTCAGCAGTGCAGCAGGTTCCATTTGCTAGCTGACTTTGATGATGGTAAGCGCA GTTGTCGTAGGCGTCTAGCAGGACATAATGAACGCCGAAGGAAACACCAATTTGATTACATGTCTAGTAAACAACACAAGATTCATCAGTCATTTCAAGG TACCGAGTATTTGGGGTCTTCGTTACAGAAAAGATCACAGTTTCCCTTTCAAGACATATTTCGGAGTGGCATCATTTTCTCAGGAAAGTATGACCAAATC TCTCATAGTGGATATGTCAAATTGGAACATGAATCAATCTACAGTTCTCAAGAAGCAGTAGCTTTAACGCATGGTCAGGAGTTATCAGGCTGTGCTCTCT CTCTTCTGTCAGCTCAGTCACAGAATCCGTCGCACCATTCAGCCGGAAATATATCGCCTAGTTCCCCTATTTTTCAGAGCATCTGCTTGCAAAACAGAGA TGATCAAGTGTCTGAAACACCATCAAGGATAAGCTCTGTCGATAAATATGTACCAACCGAGTCCTTTCCATGTGGGATGAAGAACTCTAAGGAAGACAAA ACAAGTGGATCATCAATACTTTCTAATGATTATTGCCAACCATCGGCCTCATGTGACGTCAAATATCGTCCTTCGTATGAACATGGAACAACGGTCGATC TGTTCCAATTGTCCTCAAATCTTCAAAGGGTGGAGCAGCAAAGAAATGGTTTGATAAAATGGGAAAATGATGATTTCTGTTTCCCAACTGTGTAAAAGCT GTTGTTTAACCCTACAATATTATTGTCATGTCTAAATTGTTGATACCTATATCGTGATGCTTTAACTTAGCACTGTTTTTAATACAAATGAATGATGCAT TTCATATTTTATACCGATGATACAAAGATATTAGACCAGAAATGTTTGTGTTGAAAAAACATTTCTCTTTATTAAATACAAT
• Tissue: pods
• Gene name: LI_gene_190837;
• Additional information: details;

Expression of Ll_transcript_305589

FPKM

• PAB: 2.3
• PNAB: 4.1
• PS1: 8.8
• PS2: 2
• PS3: 5.7
• PW1: 4.2
• PW2: 7.5
• PW3: 6.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_305589

• Blastp: Squamosa promoter-binding-like protein 6 from Arabidopsis with 38.75% of identity
• Blastx: Squamosa promoter-binding-like protein 6 from Arabidopsis with 41.05% of identity
• Eggnog: Squamosa promoter-binding-like protein(ENOG41120IC)
• Kegg: Link to kegg annotations (AT1G69170)
• CantataDB: -
• Mirbase: far-MIR156b (MI0016615)
• Ncbi protein: Link to NCBI protein (XP_019428516.1)
• Pfam: SBP domain (PF03110.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;