Id Trinity | TRINITY_DN52201_c2_g1_i3 |
---|---|
Name Transcript | Ll_transcript_305599 |
Sequence | GTCTGAATCTTTTGGGCTTATATTCCTCAAAAATGATGTTTGGACTTTGGAATATGCTATCCCTTCACCCTTCACCCTTCACCCTTGCCCGAAATCAAAT TCACATTCAAATACTATTGTTGACTTTTGACTCTTCTTCCTCTTCTTCTCTCCCTTCACCATTCTCATGTCAATTCTCTAACCTCAACATTCCATTCCAA ACCCTTCACCTTCACCTTCACCTTCACCTTCATCACCAACAATGGTTCCAGATCTACTCTCCAAATCCCTAAAACTCAAAACCAAACAACAAGAGCTTCT CATCCGCGTCACAATCCTCACTCTCGTCTACATCCTCGCCTTCATCACGCGCCTCTTCAGCGTCCTCCGCTATGAATCCATGATCCACGAGTTCGATCCT TACTTCAATTACCGAACTACACTCTACCTCACTCGCAATGGATTCTACGATTTCTGGAACTGGTTCGATTCTGATAGCTGGTATCCTCTCGGTAGAATCA TCGGTGGAACACTGTACCCTGGTCTTATGGTAACCGCTGCTCTTATCTATCGGATCCTACATTTTCTACGATTCATTGTTCATATTCGTGAGGTTTGTGT CCTTACGGCGCCGTTTTTTGCGTCCAATACTACAATTGTTGCGTACTTGTTCGGTAAGGAGCTTTGGGATTCCGGTGCTGGTCTTGTTGCTGCGGCATTG ATCGCGATTTGCCCTGGCTACATTTCTAGGTCTGTTGCTGGATCCTATGATAATGAAGCTGTTGCTATTTTTGCGCTGTTGTTGACCTTTTACTTGTTCG TCAAGGCGGTGAACACAGGATCACTGGCATGGTCGTTGGCATCGGCATTTGGGTATTTCTACATGGTTTCAGCATGGGGTGGTTATGTTTTTATCATTAA CTTGGTTCCTCTTTATGTGCTGGTGATGTTGGTCACAGGGAGGTACTCCATGAGGCTCTATGTTGCGTACAATTGTATGTATGTGCTGGGAATGTTGCTT GCCATGCAAATAAGGTTTGTGGGATTCCAGCATGTGCAGTCTGGGGAGCATATGGCTGCTATGGGCGTGTTTTTCTTGCTTCAGGTTTTTTTCTTCTTGG ATTGGGTAAAGCATTTGCTCAGTGATACAAAGTTGTTTCAAGCATTTTTGAGGATCACGGTAACCGGTGCAGTTACTGTTGGAGCCATTGCTTTGGGAGT AGGCACAGCAACTGGTTTTATATCTCCATGGACAGGAAGGTTTTATTCATTGCTTGATCCAACTTATGCAAAGGATCACATTCCAATTATTGCATCTGTC TCTGAGCATCAGCCAACAGCTTGGTCATCATTCATGTTTGATTTCCATATCTTGATGTTCCTTTTCCCCGCTGGACTATATTTTTGCTTCAAGCGCTTAT CAGATGCCACAATCTTTATAGTTTTGTATGGTCTTACAAGCATGTATTTTGCTGGTGTTATGGTCCGATTAATTCTTGTTGCTACCCCTGCTGTATGCCT CATTAGTGCAATTGCGGTTTCTGCCACTGTGAAGAATTTGAGTCGGGTGGTGAGGGCCAAAACCCAAGCTGTTCAAAGTGGTTCTAGTAAAGGAACTAGT ACTGCAAAAGCTTCTTCCAAGGGTTTAGTTGATAACTCCCAGCCTTTTCAGAAAAATGGTGCTATTGCGTTACTTCTTGGGGCCTTCTTTCTGCTCAGTA GATATGCTATTCACTGTACCTGGGTCACGTCAGAGGCTTACTCATCTCCATCAATAGTCTTGGCTGCAAGGGGTGCCCATGGTAACAGGGTCATCTTTGA TGATTATCGTGAGGCATATTTTTGGCTCCGTCAGAATACTCCATCTGATGCCAAGGTGATGTCATGGTGGGATTATGGTTATCAAATCACTGCCATGGGA AACAGAACAGTTATTGTTGACAATAACACCTGGAACAATACACACATAGCAACTGTTGGGCGAGCAATGTCATCTTATGAGGATGAGGCTTATGACATAA TGAGATCGCTTGATGTTGACTACGTACTAGTTGTGTTTGGTGGGGTTACTGGTTATTCTTCTGATGATATAAATAAGTAAGGCTGTCTGAAGTAATATAT TTTGCTTTTACATCTATTTTTTAATACATTTAGTAGGTTTTTATTGATTGACTGATTAGAATGAGTCCAAATAGAAATCATTAGATTTATCTGCTCTTCA TTTATATCATATAGAAATCATCTTCATTTATGAAGATGTAAACGTTCTCTTGTTGATCACGTCCTGAATATTGACATTTCTGTTTTCCTCTTATTGGTTC ATTATTATGTTTGAATAAGCACGTCTCTTTTTTCCTTGCTAATAAGATTCAAACATTTTTTGTTAAGATATTCATAACTTTTGTGTAGATTTCTGTGGAT GGTGAGAATCGGTGGTGGAGTATTTCCTGTTATAAAAGAACCTGACTACCTTGTCAATGGAGAATATCGTGTGGATAAGGGTGCAGCTCCTAAAATGTTG AACTGTCTTATGTAAGTATCTTGGTACTAGTTGGGCTTGGCTTTTGAATTATGTTAAATTCCAAGCAAGTCTATATGCTCTGAGTACAAGTCTCTTCTGG GTTTGGCATAAAATGGGCTAAATTTGAGGGGATGTATTTATTGACTAACAGCGTAGTAATGTTGGATTGTTGGACCTTGCCCTTAGGGGGTGTTCAAGTT TTACTAGCTTAAGATTCTTATTCAAGTTTACCTAGTGCTTCTGCAGTGTGCATGAAGTGCTATGTTCTTTTTTAATAAAATAGAAAAATGCATGGCTACT GATATCTGTATTATATGGAAAGGTACATGAATTGATACATGGTGAGTTAATTATATTTTTATTTGTCTATGATTGTTAGGTACAAGCTGTCCTATTATCG GT BLAST |
Tissue | pods |
Gene name | LI_gene_190839; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_305599
Blastp | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B from Arabidopsis with 86.69% of identity |
---|---|
Blastx | Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B from Arabidopsis with 87.33% of identity |
Eggnog | oligosaccharyl transferase STT3 subunit(COG1287) |
Kegg | Link to kegg annotations (AT1G34130) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019443260.1) |
Pfam | Oligosaccharyl transferase STT3 subunit (PF02516.13) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |