Ll_transcript_305603

• Id Trinity: TRINITY_DN52201_c2_g1_i5
• Name Transcript: Ll_transcript_305603
• Sequence: GTCTGAATCTTTTGGGCTTATATTCCTCAAAAATGATGTTTGGACTTTGGAATATGCTATCCCTTCACCCTTCACCCTTCACCCTTGCCCGAAATCAAAT TCACATTCAAATACTATTGTTGACTTTTGACTCTTCTTCCTCTTCTTCTCTCCCTTCACCATTCTCATGTCAATTCTCTAACCTCAACATTCCATTCCAA ACCCTTCACCTTCACCTTCACCTTCACCTTCATCACCAACAATGGTTCCAGATCTACTCTCCAAATCCCTAAAACTCAAAACCAAACAACAAGAGCTTCT CATCCGCGTCACAATCCTCACTCTCGTCTACATCCTCGCCTTCATCACGCGCCTCTTCAGCGTCCTCCGCTATGAATCCATGATCCACGAGTTCGATCCT TACTTCAATTACCGAACTACACTCTACCTCACTCGCAATGGATTCTACGATTTCTGGAACTGGTTCGATTCTGATAGCTGGTATCCTCTCGGTAGAATCA TCGGTGGAACACTGTACCCTGGTCTTATGGTAACCGCTGCTCTTATCTATCGGATCCTACATTTTCTACGATTCATTGTTCATATTCGTGAGGTTTGTGT CCTTACGGCGCCGTTTTTTGCGTCCAATACTACAATTGTTGCGTACTTGTTCGGTAAGGAGCTTTGGGATTCCGGTGCTGGTCTTGTTGCTGCGGCATTG ATCGCGATTTGCCCTGGCTACATTTCTAGGTCTGTTGCTGGATCCTATGATAATGAAGCTGTTGCTATTTTTGCGCTGTTGTTGACCTTTTACTTGTTCG TCAAGGCGGTGAACACAGGATCACTGGCATGGTCGTTGGCATCGGCATTTGGGTATTTCTACATGGTTTCAGCATGGGGTGGTTATGTTTTTATCATTAA CTTGGTTCCTCTTTATGTGCTGGTGATGTTGGTCACAGGGAGGTACTCCATGAGGCTCTATGTTGCGTACAATTGTATGTATGTGCTGGGAATGTTGCTT GCCATGCAAATAAGGTTTGTGGGATTCCAGCATGTGCAGTCTGGGGAGCATATGGCTGCTATGGGCGTGTTTTTCTTGCTTCAGGTTTTTTTCTTCTTGG ATTGGGTAAAGCATTTGCTCAGTGATACAAAGTTGTTTCAAGCATTTTTGAGGATCACGGTAACCGGTGCAGTTACTGTTGGAGCCATTGCTTTGGGAGT AGGCACAGCAACTGGTTTTATATCTCCATGGACAGGAAGGTTTTATTCATTGCTTGATCCAACTTATGCAAAGGATCACATTCCAATTATTGCATCTGTC TCTGAGCATCAGCCAACAGCTTGGTCATCATTCATGTTTGATTTCCATATCTTGATGTTCCTTTTCCCCGCTGGACTATATTTTTGCTTCAAGCGCTTAT CAGATGCCACAATCTTTATAGTTTTGTATGGTCTTACAAGCATGTATTTTGCTGGTGTTATGGTCCGATTAATTCTTGTTGCTACCCCTGCTGTATGCCT CATTAGTGCAATTGCGGTTTCTGCCACTGTGAAGAATTTGAGTCGGGTGGTGAGGGCCAAAACCCAAGCTGTTCAAAGTGGTTCTAGTAAAGGAACTAGT ACTGCAAAAGCTTCTTCCAAGGGTTTAGTTGATAACTCCCAGCCTTTTCAGAAAAATGGTGCTATTGCGTTACTTCTTGGGGCCTTCTTTCTGCTCAGTA GATATGCTATTCACTGTACCTGGGTCACGTCAGAGGCTTACTCATCTCCATCAATAGTCTTGGCTGCAAGGGGTGCCCATGGTAACAGGGTCATCTTTGA TGATTATCGTGAGGCATATTTTTGGCTCCGTCAGAATACTCCATCTGATGCCAAGGTGATGTCATGGTGGGATTATGGTTATCAAATCACTGCCATGGGA AACAGAACAGTTATTGTTGACAATAACACCTGGAACAATACACACATAGCAACTGTTGGGCGAGCAATGTCATCTTATGAGGATGAGGCTTATGACATAA TGAGATCGCTTGATGTTGACTATGTATTAGTTGTGTTCGGTGGTGTTACTGGTTATTCTTCTGATGATATTAATAAATTTTTGTGGATGGTGAGAATTGG TGGTGGAGTCTTTCCTGTTATAAAGGAACCTGACTACCTGGTCAATGGAGAATATCGCGTGGATAAGGGGGCAGCTCCTAAGATGTTGAACTGTCTTATG TATAAGCTGTCTTATTATCGGTTTGGGGAGCTGACAACAGAGTATGGCAAACCACCTGGGTACGATCGTGCTAGAGGAGTGGAAATTGGAAATAAGGACA TAAAGCTTGAGTACTTAGAAGAGGCATTCACTACCCAGAATTGGATAGTTCGTATTTATAAGGTGAAGCCACCTAAGAACAGATGGTAAATCTATTAACT TTTAATCTCCAGCACCACCTTGCCCAAAACTCAAAAATGATAAGACTGCGGAAAATTATAGCATTTTAGTGAACTTGAGAGGTGAAATTTGTTAGCTATG TTATAGATTGTTGACAATTTTGAACTATTTATATGTAGAGTACAGTTTAATTAATGTTTTGGAACCACTTCTGAAGAAATTTTCGTTGATTTGAAGTGCA TAATTTAACCTCTTGGCTAGGTTGGTAAGAAGGGCTAATAATTCTCTTAAATTATTAGTATTAATGAATGTGCTATGTATGCAAGAACTAAGGGATACTG TTATTATTTTAATAATAGTAAGTTTTTAAGGTTAAAA
• Tissue: pods
• Gene name: LI_gene_190839;
• Additional information: details;

Expression of Ll_transcript_305603

FPKM

• PAB: 2.3
• PNAB: 21.1
• PS1: 18.2
• PS2: 12.8
• PS3: 16.5
• PW1: 22.9
• PW2: 14.3
• PW3: 5.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_305603

• Blastp: Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B from Arabidopsis with 87.47% of identity
• Blastx: Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B from Arabidopsis with 88.04% of identity
• Eggnog: oligosaccharyl transferase STT3 subunit(COG1287)
• Kegg: Link to kegg annotations (AT1G34130)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019443260.1)
• Pfam: Oligosaccharyl transferase STT3 subunit (PF02516.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;