Ll_transcript_304457

• Id Trinity: TRINITY_DN52207_c7_g2_i1
• Name Transcript: Ll_transcript_304457
• Sequence: AAAAGAACTGCTCAGGTTGCCGTGGGCAGTGGAACAAGCAGTGTGGGCAGTGGAACAAGCAGTGTGGGCAGTGTGCAGACCTCAGAAAACAACAAATCCC GAGGAGGAGGATTTAAACATCTCAGTGCCGCGGAAATGAGGGAGAAAAGGGAGAAAGGGCTTTGTTTTAGATGTGATGAGCCCTATAGTCGTGAGCATAG ATGTAAGAATGGTCAATTCAGAATGATAGTGATGGAGGAAGAAGATACAAGAGAAGGGTTGAATGAAGATGAATTGGAAGAATTAAATTTGAATTCTCTC CAATTATCTTTGTGTACTATGGCTGGATTCACAACAAAAAAAATCATGGAAAGTAGCAGAAGAAATGGAAGGCAAGGATGTGGTAATCTTGATAGATTGT GGGGCTTCCCACAATTTTATTTCTTCTGAACTAGTGGGAAGATGGCAGCTTAAAGTACAAGATACTTCTGCCTATACGGTGGAGGTTGGAGATGGGCATA AAATTCAATGTAAAGGGAAATGTGCTGAAATGAAGGTGTTGATGCAAGGGCTCGAAATAGTTCAAATTTTTTACTTATTTGGGCTCAAGGGTGTAGACCT GGTTTTAGGGCTGGAATGGTTAGCAAAATTGGGGGAGGTTAAGGCTGACTTTGGTAAGTTGGAATTAACCGTGAAGAAGGGAAATATGGTGCATAAGATC AAGGGATATCCTTCTCTCCATAGAACACAATTATCATTGAAGGCATTTATGCAAGTATTAAAGGAAGAAGGGGAAGGATTTATGTTGCAGGGTGTGGAAG GTACAGAATTGGAGAAGATAGTAGAGATTCCCAAGGCTATTTCAGAAGTGATGAATCAGTTTGCAGAAGTTTTTGAGAGTATTCAAGGTCTTCCACCTCA AAGAACTCATGATCATGCAATCCATCTCAAGGAAGGGGCTGAAATTCCCAACATAAGGCCTTACAAATATCCTCACTATCAAAAGAATGAGATTGAAAAG TTAGTGCTGGAAATGTTGCAAGGAGGGGTCATTCGGCCTAGTGTAAGTCCTTACTCTAGTCCTGTAATTTTGGTTAAGAAGAAAGATGGTGGGTGGAAAT TTTGTGTTGATTATAGGGCCCTCAACAAGATCACTATTCCTAATAAATTTCCAATCCCTATTATAGAAGAGTTATTGGATGAATTGGGAGGGGCCAAAAT CTTTTCCAAGTTAGATCTTAAATCTGGTTATCATCAAATAAGGATGAAAGAGCAAGACATTGAGAAAACTGCTTTTAGGACACACGAAGGGCATTATGAA TTTGTGGTGATGCCCTTTGGATTGACAAATGCACTCTCTACTTTTCAAGCTTTGATGAATGAGGTCTTAAGCCTTTCTTGAGGAAATTTGCATTAGTGTT TTTTGACGATATATTGGTATTTAGCCCTACTTTGGAGGATCATTGTGAACACCTCAAGCAAGTTTTACAGGTGCTGCAATTGAATGCTCTTAAGGCTAAT CCGAAGAAGTGCACTTTCGGTCAAAACATATTGGAGCACTTGGGACATATTGTGTCATCAGATGGAGTTGAAGCTGATCCGGCAAAGGTTGCAGCCATGT GTTCTTGGTCTGTTCCCAAGGATATCAGAGGGTTGAAAGGCTTTCTAGGCCTCACGGGTTATTATCGGAAGTTTGTGAGGGATTATGGGAAGAAGGTAAA ACCCCTCACGTATTTATTGAGGAAGGAATGGTTCAAATGGACAGATCAAGCTACTCAATCATTTGAGATTCTCAAGGCTGCTATGATTGATCTTCCTAAA CTGGCTGTACCAGATTTCTCCAAAGTCTTTGTCATTGAGACGGATGCCTCTAGTAAAGGATTAGGAGCTGTTCTTATGCAAGAAGGAAAGCCCCTAGCGT ATTGGAGTCAAGGATTATCTATGAAAGCGCAACAAAAATCAGTCTACGAGAGGGAATTGATGGCTTTAATACAAGCGGTGCAGCGATGGAAACACTATTT ATTGGGAAGGCATTTCATAGTCAAAATTGATCAAAGAAGTCTTAAGTTTCTAAATGATCAGAGGCTATTTTCAGAGGAACAATTTAAGTGGGCCGTGAAG CTCATTGGGATGGATTTTGAAGTACAGTTCAAACCAGGAAAGCTAAATTGTGTGGCAGATGCTTTGTCCAGAAAATGGATGTATGCTATATCTTTGATAG ACAAGGCTGATATAGAAGGATGGACACAAGAAGTGAAGCAAGATCTGCAGTGGCAGAAAATGATACAAGACCTCATCATTAAACCTGATTCACATTCCGA GTTTGCTTATAAGAATGGGATATTGTTGCATGAAGGTCGATTGGTTTTAGCAAGGGATTGTAACCGAATTCCTCTCATCTTGAGAGAATGTCATGAGTCT CCTATTGGAGGACATTCAGGGTATTTCAGAACCTACAAAATAGTGGCAAGTTGTGTCTATTGGATTGGGATGAAGGGTGACATTAAACGGTTTGTGGAGG AATGTGAGGTATGTCAAAGGTACAAGCATTCTACTCTCACACCAGGGGGTTGTTGCAACCACTACCTATACCTACTCAGGTCAGGATGGAAGTCTCTATG GATTTTATTGGGGGACTACCGAGGAGTAGAGGTAAAGACACCATATTCGTGGTAGTGGACATATTGTCCAAATATGCCCACTTTTATGCACTCCGCCATC CCTTCTCTGCCAAAGATGTGGCTCAATTGTTTGTCAATGAGGTAGTGAAATTGCATGGGTTCCCGACAGCTATTGTTTCCGACCGAGATCCCATTTTCCT AAGTAATTTTTGGAAAGAATTATTTAGAGTGGCAGGAACACAATTGAAATTAAGTACTTCCTACCACCCTCAAACGGATGGGTAGACGGAAGTAATGAAT AGGTGTCTTGAGGGTTATTTAAGGTGTTTTGTAGGGCCCAAACCGAAACAGTGGGGACAATGGTTAGCTTGGGCATAGTTCTAGTATAACACTAACTTCC ATAGTGCTATTGGAATGACTCCTTTCAAAGCGTTGTATGGTCGGGATCCCCCTCTACTTTTGAAAGCAACCGAATTTCCTTCTAAGGTGGATGAGGTCAA TAAGTTGTTGCAAAACAGAGATACTGTTTTGGAAGAACTTAAACAGAACTTAACTAAGGCTCAAGAACAAATGAAGAGACAAGCAGATAAAAATCGGAGA CATGTGGAATTCCAATTAGGGGATTGGGTGTTCTTGAAGATTCAACCATACAAACTAAGATCTTTGGCTTCTAGACCTTGTGCTAAATTGGCAGCAAGGT ACTATGGACCGTATAAGATCATCAGCAAGGTAGGACCAGTAGCATACAAGCTTAAATTGTCGGAACATGCTAAGATCCACCCTGTTTTTCATGTCTCTCT ATTAAAGAAGGCCATTAAACCGAGTCAGCAACCTCAACCTCTTCCAGCATTGTTGAATGAAGAGTATGAGTTACAAGTGGAGCCTGAAGATGTTCTGGAG ACTAGGGAGC
• Tissue: pods
• Gene name: LI_gene_190908;
• Additional information: details;

Expression of Ll_transcript_304457

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0.7
• PS2: 0.1
• PS3: 0
• PW1: 0.2
• PW2: 0.6
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_304457

• Blastp: Transposon Ty3-G Gag-Pol polyprotein from Saccharomyces with 51.97% of identity
• Blastx: Transposon Ty3-I Gag-Pol polyprotein from Saccharomyces with 51.97% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (YGR109W-B)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019416449.1)
• Pfam: gag-polyprotein putative aspartyl protease (PF13975.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;