Ll_transcript_304459

• Id Trinity: TRINITY_DN52207_c7_g2_i2
• Name Transcript: Ll_transcript_304459
• Sequence: AAAAGAACTGCTCAGGTTGCCGTGGGCAGTGGAACAAGCAGTGTGGGCAGTGGAACAAGCAGTGTGGGCAGTGTGCAGACCTCAGAAAACAACAAATCCC GAGGAGGAGGATTTAAACATCTCAGTGCCGCGGAAATGAGGGAGAAAAGGGAGAAAGGGCTTTGTTTTAGATGTGATGAGCCCTATAGTCGTGAGCATAG ATGTAAGAATGGTCAATTCAGAATGATAGTGATGGAGGAAGAAGATACAAGAGAAGGGTTGAATGAAGATGAATTGGAAGAATTAAATTTGAATTCTCTC CAATTATCTTTGTGTACTATGGCTGGATTCACAACAAAAAAATCATGGAAAGTAGCAGAAGAAATGGAAGGCAAGGATGTGGTAATCTTGATAGATTGTG GGGCTTCCCACAATTTTATTTCTTCTGAACTAGTGGGAAGATGGCAGCTTAAAGTACAAGATACTTCTGCCTATACGGTGGAGGTTGGAGATGGGCATAA AATTCAATGTAAAGGGAAATGTGCTGAAATGAAGGTGTTGATGCAAGGGCTCGAAATAGTTCAAATTTTTTACTTATTTGGGCTCAAGGGTGTAGACCTG GTTTTAGGGCTGGAATGGTTAGCAAAATTGGGGGAGGTTAAGGCTGACTTTGGTAAGTTGGAATTAACCGTGAAGAAGGGAAATATGGTGCATAAGATCA AGGGATATCCTTCTCTCCATAGAACACAATTATCATTGAAGGCATTTATGCAAGTATTAAAGGAAGAAGGGGAAGGATTTATGTTGCAGGGTGTGGAAGG TACAGAATTGGAGAAGATAGTAGAGATTCCCAAGGCTATTTCAGAAGTGATGAATCAGTTTGCAGAAGTTTTTGAGAGTATTCAAGGTCTTCCACCTCAA AGAACTCATGATCATGCAATCCATCTCAAGGAAGGGGCTGAAATTCCCAACATAAGGCCTTACAAATATCCTCACTATCAAAAGAATGAGATTGAAAAGT TAGTGCTGGAAATGTTGCAAGGAGGGGTCATTCGGCCTAGTGTAAGTCCTTACTCTAGTCCTGTAATTTTGGTTAAGAAGAAAGATGGTGGGTGGAAATT TTGTGTTGATTATAGGGCCCTCAACAAGATCACTATTCCTAATAAATTTCCAATCCCTATTATAGAAGAGTTATTGGATGAATTGGGAGGGGCCAAAATC TTTTCCAAGTTAGATCTTAAATCTGGTTATCATCAAATAAGGATGAAAGAGCAAGACATTGAGAAAACTGCTTTTAGGACACACGAAGGGCATTATGAAT TTGTGGTGATGCCCTTTGGATTGACAAATGCACTCTCTACTTTTCAAGCTTTGATGAATGAGGTCTTAAGCCTTTCTTGAGGAAATTTGCATTAGTGTTT TTTGACGATATATTGGTATTTAGCCCTACTTTGGAGGATCATTGTGAACACCTCAAGCAAGTTTTACAGGTGCTGCAATTGAATGCTCTTAAGGCTAATC CGAAGAAGTGCACTTTCGGTCAAAACATATTGGAGCACTTGGGACATATTGTGTCATCAGATGGAGTTGAAGCTGATCCGGCAAAGGTTGCAGCCATGTG TTCTTGGTCTGTTCCCAAGGATATCAGAGGGTTGAAAGGCTTTCTAGGCCTCACGGGTTATTATCGGAAGTTTGTGAGGGATTATGGGAAGAAGGTAAAA CCCCTCACGTATTTATTGAGGAAGGAATGGTTCAAATGGACAGATCAAGCTACTCAATCATTTGAGATTCTCAAGGCTGCTATGATTGATCTTCCTAAAC TGGCTGTACCAGATTTCTCCAAAGTCTTTGTCATTGAGACGGATGCCTCTAGTAAAGGATTAGGAGCTGTTCTTATGCAAGAAGGAAAGCCCCTAGCGTA TTGGAGTCAAGGATTATCTATGAAAGCGCAACAAAAATCAGTCTACGAGAGGGAATTGATGGCTTTAATACAAGCGGTGCAGCGATGGAAACACTATTTA TTGGGAAGGCATTTCATAGTCAAAATTGATCAAAGAAGTCTTAAGTTTCTAAATGATCAGAGGCTATTTTCAGAGGAACAATTTAAGTGGGCCGTGAAGC TCATTGGGATGGATTTTGAAGTACAGTTCAAACCAGGAAAGCTAAATTGTGTGGCAGATGCTTTGTCCAGAAAATGGATGTATGCTATATCTTTGATAGA CAAGGCTGATATAGAAGGATGGACACAAGAAGTGAAGCAAGATCTGCAGTGGCAGAAAATGATACAAGACCTCATCATTAAACCTGATTCACATTCCGAG TTTGCTTATAAGAATGGGATATTGTTGCATGAAGGTCGATTGGTTTTAGCAAGGGATTGTAACCGAATTCCTCTCATCTTGAGAGAATGTCATGAGTCTC CTATTGGAGGACATTCAGGGTATTTCAGAACCTACAAAATAGTGGCAAGTTGTGTCTATTGGATTGGGATGAAGGGTGACATTAAACGGTTTGTGGAGGA ATGTGAGGTATGTCAAAGGTACAAGCATTCTACTCTCACACCAGGGGGTTGTTGCAACCACTACCTATACCTACTCAGGTCAGGATGGAAGTCTCTATGG ATTTTATTGGGGGACTACCGAGGAGTAGAGGTAAAGACACCATATTCGTGGTAGTGGACATATTGTCCAAATATGCCCACTTTTATGCACTCCGCCATCC CTTCTCTGCCAAAGATGTGGCTCAATTGTTTGTCAATGAGGTAGTGAAATTGCATGGGTTCCCGACAGCTATTGTTTCCGACCGAGATCCCATTTTCCTA AGTAATTTTTGGAAAGAATTATTTAGAGTGGCAGGAACACAATTGAAATTAAGTACTTCCTACCACCCTCAAACGGATGGGTAGACGGAAGTAATGAATA GGTGTCTTGAGGGTTATTTAAGGTGTTTTGTAGGGCCCAAACCGAAACAGTGGGGACAATGGTTAGCTTGGGCATAGTTCTAGTATAACACTAACTTCCA TAGTGCTATTGGAATGACTCCTTTCAAAGCGTTGTATGGTCGGGATCCCCCTCTACTTTTGAAAGCAACCGAATTTCCTTCTAAGGTGGATGAGGTCAAT AAGTTGTTGCAAAACAGAGATACTGTTTTGGAAGAACTTAAACAGAACTTAACTAAGGCTCAAGAACAAATGAAGAGACAAGCAGATAAAAATCGGAGAC ATGTGGAATTCCAATTAGGGGATTGGGTGTTCTTGAAGATTCAACCATACAAACTAAGATCTTTGGCTTCTAGACCTTGTGCTAAATTGGCAGCAAGGTA CTATGGACCGTATAAGATCATCAGCAAGGTAGGACCAGTAGCATACAAGCTTAAATTGTCGGAACATGCTAAGATCCACCCTGTTTTTCATGTCTCTCTA TTAAAGAAGGCCATTAAACCGAGTCAGCAACCTCAACCTCTTCCAGCATTGTTGAATGAAGAGTATGAGTTACAAGTGGAGCCTGAAGATGTTCTGGAGA CTAGGGAGAATCAACAAGGATTAGTGGAGGTGTTGGTGAAATGAGCTCAATTACCGGAAGCGGATAATACTTGGGAGACAGTATCCAGCATACAAGACAA ATTTCCTACTTTTCCCCTTGAGGACAAGGTGGCTCTTTTGGAAGGGGGTAGTGATAGAGGAGCAAGACCACCAATTACAAAGGTGTATGTGAGAAGGAAC AAGAAGTTGAAGTAGTTAGTTTGCAAGTTACTTT
• Tissue: pods
• Gene name: LI_gene_190908;
• Additional information: details;

Expression of Ll_transcript_304459

FPKM

• PAB: 0.9
• PNAB: 13.2
• PS1: 13.9
• PS2: 10.8
• PS3: 14.4
• PW1: 10.4
• PW2: 11.3
• PW3: 11.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_304459

• Blastp: Transposon Ty3-I Gag-Pol polyprotein from Saccharomyces with 51.97% of identity
• Blastx: Transposon Ty3-I Gag-Pol polyprotein from Saccharomyces with 51.97% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (YIL082W-A)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019416449.1)
• Pfam: gag-polyprotein putative aspartyl protease (PF13975.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;