Ll_transcript_304852

• Id Trinity: TRINITY_DN52212_c4_g1_i9
• Name Transcript: Ll_transcript_304852
• Sequence: TCTGGATTCCACACAGATCAGCACAATAGTGGAGCTCCAGGTAATTGATGTGCTCATATTACAATTTTCCTTTTCAACTTGTCTTATTTCTCAGTTCCCT GGTATCAATGGAAAATAAATAATGGATTACATATTTAACAAAATAAGATGTTAATAGCTATTCTCTGGTTATTGAAGTTTTTTGGATTATGTTCTTTGAC TCATTGTAATTTATGAAGATGTATATGTTAATACATGTTTTGTAACCTGCTACACAGATGGAACGAGTGAAGAACAGGCTGAAGCAGAAGAAAATTGATC TTCAGTACACCCAAGAAGCTGTTGAACTTCTTGGTGTATTGGGTTTTGATCCAAATTTTGGGGCAAGACCAGTTAAAAGAGTGATACAACAATTGGTCGA AAATGAAATTGCAATGGGAGTTCTAAGGGGAGATTTCAAAGAAGAGGATTCAATCATAGTTGATGCTGATGTGACTCCATCAGCCAAGGACCCTTCTCCC CTAAACAGACTGCATATTAAGAAGCTGGACAACCCTGTTGCTGATGCCATGGTTGCCAATGACTAATTTTCCCCATTGGGTTTCTCATGAAAGCTTCACA ATGGTGAGTTAAGATAACATAGTTCATACTTTTTTTGTATAGTGAATAGTTATGATAATTCCTTAGGGTATGAACTCAGTCCTTGTGTTTTATTTTAGGC CATGTTTTCCCACTTTGGGTAATAAGATTATTCTTTTAAAGGCTCTGTGAATTTGGAGTTCTCTGTTTTTTTTATATTCGGCTCTTACTCCCCTACTTTA TCT
• Tissue: pods
• Gene name: LI_gene_190947;
• Additional information: details;

Expression of Ll_transcript_304852

FPKM

• PAB: 2.9
• PNAB: 0
• PS1: 0
• PS2: 0
• PS3: 0.1
• PW1: 0
• PW2: 0.3
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_304852

• Blastp: Chaperone protein ClpB3, mitochondrial from Oryza sativa with 60.78% of identity
• Blastx: Chaperone protein ClpB3, mitochondrial from Oryza sativa with 61.17% of identity
• Eggnog: ATP-dependent CLP protease ATP-binding subunit(COG0542)
• Kegg: Link to kegg annotations (4328515)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019437789.1)
• Pfam: C-terminal, D2-small domain, of ClpB protein (PF10431.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;